| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0609 |
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| Symbol | |
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| ID | 5712063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 601843 |
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| End bp | 603387 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641266512 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001531956 |
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| Protein GI | 159043162 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGAA AGACATCGGG AGCGCTTTTG CCGGGTCTGG ACTTGGACCC GAGCGCAGAT
ACACCACTGG CCACGCAACT CTACGACTCT CTGCGCTACC ACATCTCGGA AGGCACACTT
GCTGCAGGGG TGCGCATGCC CTCGACGCGC ACGCTTTCCA CAGAGCTTGG GATGTCGCGC
ACGACCGTGG CTGGCGCCTA TGACCAGCTC AAATCTGAGG GCTATCTCAC GTCAGAGGAG
AAGTCGGGGA CGTTCGTTGC GGATCTCCTA CCGGAGAAAC TGGCCTGGTC AACGCAGCTT
CACTATGCGC GTCCCGACGA TCTGCGCCAG CTTGAGCCTG ATCTGGCGGC GCGATTTGAC
GACAACCTGC CCAAACAGCG CGAACGCACG AGTCGCACGC TCCCGTTTAA CCCCGGCATT
CCGGCTGTGT TCGAGTTTCC GTCGCAGACG TGGATCCGGA TCATGCGCCC CATTCTGAGC
CAATTGGCGC CGAATGGGAT CGCGCGTTGC CCGGCGGAAG GGTCAATCGA GCTGCGTGAG
GAGGTTTCGA GGTATTTGTC TGGAAGCAGG GGTGTGACCT GCTCACCCGA ACAGGTGCTG
ATCATTTCCG GAACACGTCA AGCCCTCACG CTCATCATGA TGGCGCTTGC CAACCAGGGT
GATACCGGCT GGGTCGAGGA TCCCGGCTAC CCGGGCATCT CACGGGTTTA CGACCTTTTT
CGTGTTGGAA CGGTGCCAGT TCCCGTCGAT GCACATGGGC TTGTCGTCGA GGAGGCCATT
GAGCGCGCGC CACACTCGAA ATTCGCGTAT GTCACTCCGG CACGTCAGGC ACCCCTTGGA
CACACAATGT CGATTCGGCG GCGCATCGAG CTCCTGAACT GGGCTTATGC CTCAGAGGCG
TTCATCCTAG AGGACGACTA TGACGGCGAG TATCGGTTCG GAGGTCACCC GGCCCCATCG
CTTCAGAGCC TCGACCCTGA AGGGCGGGTG TTTTATTTCG GCACTTTTTC AAAGACCGTT
CTCCCGTCCC TGGGACTTGG TTACCTCGTG GTGCCCACTC GATATGTCGA TGTCTTCAGG
AACCTGTTGG ACGCGATCAC CCGTCCGCCC AGCCTGGCCA CCCAACTCAC CATGGCAGAG
TTCATGGCCA GCGGACTATT CGAAGCGCAT ATCCGCAAGA TGCGCACACT ATATCTGAGC
CGCCAAAATG CGCTGAGCGC CGTGTTGCGC AAGTCGATGC CCGACCTGTT GGAGAGCAAG
ATATTGAACG CCGGGCTACA TCTGATCGGC TATTTGCCCA AGGGCTACGA CGATGCAAAG
GTTGCGCGCC GGGCCAAGGA TCTGGGGCTT CTTCCGCGTC CGCTGTCTGA TTACGTACAC
AAGGAGCGAC TCCCGCCCGG ACTGCTGATC GGTTTTTCCA ACATCAAGGA AGAGGCGATG
GCGCGTACTG TCCGTGTCCT GCGTCGCGCT ATTGAAGATT GCCAGCCCGA AACGGGTCAT
GCTCCGGCAA GTCGGTCACC AACATATGCC CGGGGCGGTG GGTGA
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| Protein sequence | MARKTSGALL PGLDLDPSAD TPLATQLYDS LRYHISEGTL AAGVRMPSTR TLSTELGMSR
TTVAGAYDQL KSEGYLTSEE KSGTFVADLL PEKLAWSTQL HYARPDDLRQ LEPDLAARFD
DNLPKQRERT SRTLPFNPGI PAVFEFPSQT WIRIMRPILS QLAPNGIARC PAEGSIELRE
EVSRYLSGSR GVTCSPEQVL IISGTRQALT LIMMALANQG DTGWVEDPGY PGISRVYDLF
RVGTVPVPVD AHGLVVEEAI ERAPHSKFAY VTPARQAPLG HTMSIRRRIE LLNWAYASEA
FILEDDYDGE YRFGGHPAPS LQSLDPEGRV FYFGTFSKTV LPSLGLGYLV VPTRYVDVFR
NLLDAITRPP SLATQLTMAE FMASGLFEAH IRKMRTLYLS RQNALSAVLR KSMPDLLESK
ILNAGLHLIG YLPKGYDDAK VARRAKDLGL LPRPLSDYVH KERLPPGLLI GFSNIKEEAM
ARTVRVLRRA IEDCQPETGH APASRSPTYA RGGG
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