More than 300 homologs were found in PanDaTox collection
for query gene BamMC406_2021 on replicon NC_010551
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010508  Bcenmc03_2129  DNA internalization-related competence protein ComEC/Rec2  84.89 
 
 
829 aa  1239    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.326593  normal  0.0900672 
 
 
-
 
NC_008785  BMASAVP1_A2198  DNA internalization-related competence protein ComEC/Rec2  59.95 
 
 
856 aa  781    Burkholderia mallei SAVP1  Bacteria  normal  0.975554  n/a   
 
 
-
 
NC_006348  BMA1693  DNA internalization-related competence protein ComEC/Rec2  59.95 
 
 
842 aa  781    Burkholderia mallei ATCC 23344  Bacteria  normal  0.891985  n/a   
 
 
-
 
NC_010622  Bphy_1443  DNA internalization-related competence protein ComEC/Rec2  51.33 
 
 
843 aa  729    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_2715  DNA internalization-related competence protein ComEC/Rec2  60.09 
 
 
842 aa  783    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5417  DNA internalization-related competence protein ComEC/Rec2  85.23 
 
 
830 aa  1259    Burkholderia sp. 383  Bacteria  normal  0.560238  normal 
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  59.74 
 
 
845 aa  823    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1471  DNA internalization-related competence protein ComEC/Rec2  59.95 
 
 
856 aa  781    Burkholderia mallei NCTC 10247  Bacteria  normal  0.300879  n/a   
 
 
-
 
NC_008836  BMA10229_A3120  DNA internalization-related competence protein ComEC/Rec2  59.95 
 
 
856 aa  781    Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1569  ComEC/Rec2-related protein  54.16 
 
 
801 aa  740    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.304315 
 
 
-
 
NC_010681  Bphyt_2564  DNA internalization-related competence protein ComEC/Rec2  55.27 
 
 
929 aa  760    Burkholderia phytofirmans PsJN  Bacteria  normal  0.0267783  normal  0.0941772 
 
 
-
 
NC_009076  BURPS1106A_2636  DNA internalization-related competence protein ComEC/Rec2  59.98 
 
 
856 aa  781    Burkholderia pseudomallei 1106a  Bacteria  normal  0.0667077  n/a   
 
 
-
 
NC_009074  BURPS668_2581  DNA internalization-related competence protein ComEC/Rec2  59.98 
 
 
856 aa  782    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5966  DNA internalization-related competence protein ComEC/Rec2  84.99 
 
 
829 aa  1239    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.814009  n/a   
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  79.98 
 
 
819 aa  1169    Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_010551  BamMC406_2021  DNA internalization-related competence protein ComEC/Rec2  100 
 
 
833 aa  1592    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.130557 
 
 
-
 
NC_008390  Bamb_2148  DNA internalization-related competence protein ComEC/Rec2  97.36 
 
 
829 aa  1434    Burkholderia ambifaria AMMD  Bacteria  normal  0.705314  n/a   
 
 
-
 
NC_008542  Bcen2424_2111  DNA internalization-related competence protein ComEC/Rec2  84.99 
 
 
829 aa  1239    Burkholderia cenocepacia HI2424  Bacteria  normal  0.261797  n/a   
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  44.06 
 
 
840 aa  519  1.0000000000000001e-145  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  44.41 
 
 
839 aa  510  1e-143  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  45.18 
 
 
847 aa  498  1e-139  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  38.69 
 
 
802 aa  472  1.0000000000000001e-131  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_007614  Nmul_A2506  DNA internalization-related competence protein ComEC/Rec2  38.97 
 
 
766 aa  452  1e-125  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  39.41 
 
 
851 aa  446  1.0000000000000001e-124  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  40.5 
 
 
772 aa  446  1e-123  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_009379  Pnuc_1465  DNA internalization-related competence protein ComEC/Rec2  36.82 
 
 
801 aa  443  1e-123  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2554  putative transporter DNA uptake transmembrane protein  41.26 
 
 
846 aa  419  1e-116  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  40.07 
 
 
800 aa  409  1e-113  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  40.16 
 
 
778 aa  411  1e-113  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  36.19 
 
 
784 aa  406  1e-111  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  41.72 
 
 
835 aa  400  9.999999999999999e-111  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  38.06 
 
 
770 aa  392  1e-107  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  38.02 
 
 
833 aa  392  1e-107  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  39.88 
 
 
878 aa  392  1e-107  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  41.28 
 
 
861 aa  392  1e-107  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_008781  Pnap_1205  DNA internalization-related competence protein ComEC/Rec2  37.65 
 
 
845 aa  379  1e-103  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.285892 
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  36.63 
 
 
801 aa  372  1e-101  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3158  DNA internalization-related competence protein ComEC/Rec2  39.3 
 
 
860 aa  366  1e-100  Polaromonas sp. JS666  Bacteria  normal  0.0990853  normal  0.446106 
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  37.38 
 
 
766 aa  362  2e-98  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  39.01 
 
 
822 aa  355  1e-96  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5080  DNA internalization-related competence protein ComEC/Rec2  38.27 
 
 
832 aa  352  1e-95  Delftia acidovorans SPH-1  Bacteria  normal  0.411729  normal  0.0251813 
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  39.35 
 
 
747 aa  352  1e-95  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4178  DNA internalization-like competence protein ComEC/Rec2  36.42 
 
 
747 aa  344  4e-93  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.145225  normal  0.646667 
 
 
-
 
NC_008752  Aave_1352  DNA internalization-related competence protein ComEC/Rec2  37.32 
 
 
948 aa  336  1e-90  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0141053 
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  34.93 
 
 
840 aa  322  1.9999999999999998e-86  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1632  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  36.73 
 
 
738 aa  313  9e-84  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_004578  PSPTO_3848  DNA internalization-related competence protein ComEC/Rec2  35.19 
 
 
738 aa  312  1e-83  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1473  DNA internalization-related competence protein ComEC/Rec2  34.92 
 
 
738 aa  308  3e-82  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1508  DNA internalization-related competence protein ComEC/Rec2  34.72 
 
 
737 aa  308  3e-82  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00591  DNA internalization-related competence protein ComEC/Rec2  36.56 
 
 
776 aa  304  4.0000000000000003e-81  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0903265  n/a   
 
 
-
 
NC_002947  PP_1897  DNA internalization-related competence protein ComEC/Rec2  35.92 
 
 
737 aa  303  1e-80  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.000116946 
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  30.1 
 
 
841 aa  301  2e-80  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3817  DNA internalization-related competence protein ComEC/Rec2  35.19 
 
 
738 aa  298  3e-79  Pseudomonas putida F1  Bacteria  normal  0.925349  normal 
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  30.97 
 
 
839 aa  296  1e-78  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_009439  Pmen_1611  DNA internalization-related competence protein ComEC/Rec2  35.64 
 
 
741 aa  294  4e-78  Pseudomonas mendocina ymp  Bacteria  normal  0.804409  normal  0.12587 
 
 
-
 
NC_012560  Avin_14730  DNA internalization-related competence protein ComA  36.33 
 
 
711 aa  293  6e-78  Azotobacter vinelandii DJ  Bacteria  normal  0.0603479  n/a   
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  34.25 
 
 
825 aa  291  4e-77  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp0680  hypothetical protein  31.13 
 
 
735 aa  286  1.0000000000000001e-75  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0663  hypothetical protein  30.95 
 
 
735 aa  284  4.0000000000000003e-75  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_1395  DNA internalization-related competence protein ComEC/Rec2  34.69 
 
 
799 aa  278  3e-73  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.751306  normal 
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  29.12 
 
 
762 aa  278  3e-73  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2177  DNA internalization-related competence protein ComEC/Rec2  35.35 
 
 
740 aa  273  1e-71  Pseudomonas aeruginosa PA7  Bacteria  normal  0.589266  n/a   
 
 
-
 
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  27.86 
 
 
860 aa  255  2.0000000000000002e-66  Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  28.95 
 
 
812 aa  249  2e-64  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_008740  Maqu_1744  DNA internalization-related competence protein ComEC/Rec2  30.24 
 
 
806 aa  248  3e-64  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2493  DNA internalization-related competence protein ComEC/Rec2  30.24 
 
 
773 aa  248  4e-64  Shewanella sp. MR-7  Bacteria  normal  0.105792  normal  0.137051 
 
 
-
 
NC_010506  Swoo_1818  DNA internalization-related competence protein ComEC/Rec2  30.63 
 
 
765 aa  248  4e-64  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0856288  normal  0.218544 
 
 
-
 
NC_008577  Shewana3_2585  DNA internalization-related competence protein ComEC/Rec2  30.8 
 
 
773 aa  248  4e-64  Shewanella sp. ANA-3  Bacteria  normal  normal  0.13038 
 
 
-
 
NC_009438  Sputcn32_1556  DNA internalization-related competence protein ComEC/Rec2  31.32 
 
 
774 aa  245  1.9999999999999999e-63  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2423  DNA internalization-related competence protein ComEC/Rec2  30.37 
 
 
773 aa  246  1.9999999999999999e-63  Shewanella sp. MR-4  Bacteria  normal  normal  0.395966 
 
 
-
 
NC_009708  YpsIP31758_2578  hypothetical protein  29.28 
 
 
763 aa  241  4e-62  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0251432  n/a   
 
 
-
 
NC_010465  YPK_2666  hypothetical protein  29.28 
 
 
763 aa  241  4e-62  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1958  hypothetical protein  29.15 
 
 
763 aa  239  1e-61  Yersinia pestis Angola  Bacteria  hitchhiker  0.0001218  normal  0.195131 
 
 
-
 
NC_004347  SO_2803  DNA internalization-related competence protein ComEC/Rec2  30.51 
 
 
769 aa  239  2e-61  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_25480  putative competence protein  34.81 
 
 
741 aa  239  2e-61  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1682  DNA internalization-related competence protein ComEC/Rec2  31.82 
 
 
783 aa  236  1.0000000000000001e-60  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1667  DNA internalization-related competence protein ComEC/Rec2  30.85 
 
 
795 aa  235  3e-60  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2675  DNA internalization-related competence protein ComEC/Rec2  30.71 
 
 
783 aa  234  4.0000000000000004e-60  Shewanella baltica OS223  Bacteria  normal  0.923098  normal  0.0587505 
 
 
-
 
NC_009831  Ssed_2827  DNA internalization-related competence protein ComEC/Rec2  28.98 
 
 
767 aa  233  8.000000000000001e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0829289 
 
 
-
 
NC_009997  Sbal195_1704  DNA internalization-related competence protein ComEC/Rec2  32.36 
 
 
783 aa  232  2e-59  Shewanella baltica OS195  Bacteria  normal  0.0286912  normal 
 
 
-
 
NC_013889  TK90_1202  DNA internalization-related competence protein ComEC/Rec2  32.17 
 
 
776 aa  230  7e-59  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.177641 
 
 
-
 
NC_008709  Ping_0899  DNA internalization-related competence protein ComEC/Rec2  25.54 
 
 
798 aa  229  1e-58  Psychromonas ingrahamii 37  Bacteria  normal  0.383263  normal  0.740662 
 
 
-
 
NC_009832  Spro_1711  hypothetical protein  30.17 
 
 
737 aa  229  2e-58  Serratia proteamaculans 568  Bacteria  normal  0.0805358  normal 
 
 
-
 
NC_012880  Dd703_2209  hypothetical protein  32.25 
 
 
747 aa  228  5.0000000000000005e-58  Dickeya dadantii Ech703  Bacteria  normal  0.785174  n/a   
 
 
-
 
NC_009457  VC0395_A1470  ComEC/rec2 family protein  30.42 
 
 
752 aa  227  8e-58  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0767  DNA internalization-related competence protein ComEC/Rec2  30.95 
 
 
840 aa  224  4e-57  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2389  DNA internalization-related competence protein ComEC/Rec2  27.63 
 
 
831 aa  224  4e-57  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.00142105  n/a   
 
 
-
 
NC_011313  VSAL_II0736  putative competence-related protein  26.79 
 
 
768 aa  223  9e-57  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2310  hypothetical protein  31.47 
 
 
793 aa  221  3e-56  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1336  DNA internalization-related competence protein ComEC/Rec2  30.1 
 
 
765 aa  218  4e-55  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.62013 
 
 
-
 
NC_011094  SeSA_A1097  hypothetical protein  28.72 
 
 
756 aa  214  5.999999999999999e-54  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  28.3 
 
 
763 aa  213  1e-53  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1637  DNA internalization-related competence protein ComEC/Rec2  29.04 
 
 
761 aa  210  7e-53  Shewanella loihica PV-4  Bacteria  normal  0.594703  normal 
 
 
-
 
NC_011083  SeHA_C1081  hypothetical protein  28.99 
 
 
737 aa  211  7e-53  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.30814  normal  0.0474337 
 
 
-
 
NC_011080  SNSL254_A1016  hypothetical protein  28.99 
 
 
737 aa  210  8e-53  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.619127  normal 
 
 
-
 
NC_012917  PC1_1768  hypothetical protein  30.06 
 
 
763 aa  210  1e-52  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.44185  n/a   
 
 
-
 
NC_011149  SeAg_B0989  hypothetical protein  28.41 
 
 
737 aa  209  1e-52  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1048  hypothetical protein  28.26 
 
 
737 aa  206  2e-51  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.486822 
 
 
-
 
NC_009783  VIBHAR_01534  hypothetical protein  28.01 
 
 
752 aa  202  1.9999999999999998e-50  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003988  predicted hydrolase of the metallo-beta-lactamase superfamily  26.62 
 
 
752 aa  201  3e-50  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
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