Gene Smal_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1395 
Symbol 
ID6475253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1584363 
End bp1586762 
Gene Length2400 bp 
Protein Length799 aa 
Translation table11 
GC content72% 
IMG OID642730566 
ProductDNA internalization-related competence protein ComEC/Rec2 
Protein accessionYP_002027783 
Protein GI194365173 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.751306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCCG AACGATCCGC TCCGCCGCTG TTTGGCAGTG GTTGCGCCGC CTGTCTGGTG 
CTGGGCGCGC TGACCTGCGT ACAGCTGCCG GTGCTGCCGC CAGTGTGGTT GTGCGTGCCG
TTGGCCATCG CCAGCGTCGC AGGCTGGATC GTGCCTTGGC GCGGTCGCGC GTGGGCGGCT
GCGCTGTTCG GCCTGTCGTG GGCAGCATTG CACGGGTATT GGGCCTTGCA GGCCCAGCTT
CCACCCGGAG GGCCCGCGCA GGACGCGCAG GTTCGTGGCC GAGTGGTTGA TCTTCCACAC
AGTGGCCCCG GCTACACCCG TTTCGTGCTG AAGGTCGACG AGGCCGATGC GCTGCCCTCG
TTGCGTGGCA GGCGCCTGCA GATCACCTGG AACGATCCAT GGCGTGGACC GCCTATGAGC
GGCGCCGAAG GTGGGCGCCA TGCGGTTCGA GCTGGCGCGC ATTGGGAGCT GTCGCTGCGG
GTGCGGGCAC CGCGTTCGCG GATCAATCCT GGAGGCTTTG ACGGCGAGCG CCATGCATTG
CTGAGGGGGA TATCCGGCAC CGGTACGGTG CGCGATCCGG CGAGTGCGCG TGAGCGGCGA
GCCGCGCACG GCCTGCCGGC CTGGCGCGAG CGCAGCAGTG CTGCCATCGC CACCCAGGTG
GCCCATCCTG CCGCTCGCTT CGTGCAGGCG CTGGCACTGG GCGATACCCG CGGCTTGTCC
GATGCAGACT GGGAACACCT GCGCGCACTG GGCCTGACCC ATCTGGTCGC CATCTCCGGA
TTCCATGTCG GTGTGGTTGC CGGCTTTGGC GTGATGCTGT GCCGGGGGCT GTGGTGGCTG
TGCCCAGGGT TGGCCCGCCG CTGGCCACGG CCGCAGGCGG CCGCGTGGGG CGCCGCATTG
GCGGCGGTAA TCTACGCGGT GGTCGCCGGC GGCGCGCTGC CCACGGTGCG CGCCGCGCTG
ATGATCGGCG TGGTTGCGTT GGCCCGCGCC GGGCGTCGTC CGGTAGGTGC GGGGCAGGGG
TTGGCACGGG CTGCTGTGGT GATGCTGCTG CCGGCGCCGC TGTCGGTGCT GGCCGCCGGC
TTCTGGCTCA GCTTCGGAGG CGTGCTGTGG CTGCTGTGGT GCCTGCCGCG GACCGGGCCG
GAGGGCGTCG GCGGTGGCCT GCGCGGATTC CTGGCCGCAC AGGGGGTGGC CAGCCTCGGC
CTGCTGCCCT TGTGCGTGGC GCTGTTCGGT GGCACCGCGC GGTTGGGGCC GCTGGTCAAC
CTGCCGATCA TCCCGTGGTG GACGCTGCTG GTGGTGCCGC TGTCGCTGCT TGGGACCGGG
CTGCATGCGC TGCACGACGG GGCGGGGCGC TGGGCATGGC GCGCCGCTGC CGGGCTGTTC
GAGTTCAGCT GGCAGGCCCT GCAGCCGCTA GCACAGCATC CGCAGGCGAT GTGGTGGCTG
GCCGAGGCGC CGCGCTGGGC GGTACCCGCA GCGTTGCTGG GGGTGTTCTG GTGGCTGCTG
CCTCGCGGGA ACGGCGGCGG CCTGGCCGGC CTGTTGTTGT GCCTGCCGCT GCTGTGGCCG
GCACGTGAGG CACCGGCGGA AGGGGAGCTG GAACTGCTGG TGCACGATGT TGGTCAGGGC
ACGGCGGTGC TGCTGCGCAC CGCGCGGCAC GCGCTCTGGT ACGACGTCGG GCCGCCGACC
GGCGGCGATG GCAACGAGCG AATCCTGGTC CCGGCCCTGC GCGCGCTGGG GCAGGCGCCG
CCGCAGCAGG TGATGCTCAG CCACGATCAC CTCGACCACA CCGGCAGCCT GCCCAACCTG
CGTCGGCAGT TGCCGGGGCT GCAGCTGCTG GCGCCGCCGG GCAGCGCTAT CGCCGGTACC
CGGTCGTGCC AGCAGGGGCT GCGCTGGCAG TGGGACGGGG TCGATTTCCA GGTGCTGCAT
CCGGCGCCAG GCAGCCGCCA CGCCGAGAAC GAGGACAGCT GCGTGCTGCG TGTCGCCAGC
CGCCATGGCG TGGTGCTGCT GGCCGGCGAT ATCGGACACC CTGCCGAGCA GGCGCTGCTG
CAGGCGTCCC CAACGGCATT GAAGGCGGAC GTGGTGCTGG TGCCGCACCA TGGCAGCGGC
GGCAGCTCCA GCGCGCCGTG GGTGGCCGCC GTATCACCAC GGCTGGCGCT GGTTTCGGCC
GGCCACCAGA ACCGCTTCGG CCATCCCCGC CCGGATGTGG TCCGGCGCTG GCAGGCGCAG
GGGGCCGAAG TGCTGGCCAC GGCCGATTCC GGTGCGATCC GCGTATGGCT TGGCGCACAA
GGGATGCAGC TGCGTGAACA GCGTATCCAC GCATCCCGCT GGTGGGATGC CGTTGGGCGG
GCGCGGTCGG CTGCTATCCT ATCGACGATT GAACAAGCGG CCGTTGGGCC GGAGGGTTGA
 
Protein sequence
MVAERSAPPL FGSGCAACLV LGALTCVQLP VLPPVWLCVP LAIASVAGWI VPWRGRAWAA 
ALFGLSWAAL HGYWALQAQL PPGGPAQDAQ VRGRVVDLPH SGPGYTRFVL KVDEADALPS
LRGRRLQITW NDPWRGPPMS GAEGGRHAVR AGAHWELSLR VRAPRSRINP GGFDGERHAL
LRGISGTGTV RDPASARERR AAHGLPAWRE RSSAAIATQV AHPAARFVQA LALGDTRGLS
DADWEHLRAL GLTHLVAISG FHVGVVAGFG VMLCRGLWWL CPGLARRWPR PQAAAWGAAL
AAVIYAVVAG GALPTVRAAL MIGVVALARA GRRPVGAGQG LARAAVVMLL PAPLSVLAAG
FWLSFGGVLW LLWCLPRTGP EGVGGGLRGF LAAQGVASLG LLPLCVALFG GTARLGPLVN
LPIIPWWTLL VVPLSLLGTG LHALHDGAGR WAWRAAAGLF EFSWQALQPL AQHPQAMWWL
AEAPRWAVPA ALLGVFWWLL PRGNGGGLAG LLLCLPLLWP AREAPAEGEL ELLVHDVGQG
TAVLLRTARH ALWYDVGPPT GGDGNERILV PALRALGQAP PQQVMLSHDH LDHTGSLPNL
RRQLPGLQLL APPGSAIAGT RSCQQGLRWQ WDGVDFQVLH PAPGSRHAEN EDSCVLRVAS
RHGVVLLAGD IGHPAEQALL QASPTALKAD VVLVPHHGSG GSSSAPWVAA VSPRLALVSA
GHQNRFGHPR PDVVRRWQAQ GAEVLATADS GAIRVWLGAQ GMQLREQRIH ASRWWDAVGR
ARSAAILSTI EQAAVGPEG