Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2554 |
Symbol | |
ID | 4785216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2726600 |
End bp | 2729140 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640091123 |
Product | putative transporter DNA uptake transmembrane protein |
Protein accession | YP_001021742 |
Protein GI | 124267738 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCGT CTCCATCGCT GCCGGGCCTG CGCCTGCTGG CTGCCGGTGC CGGCGTGGTG CTGGGATCGT CCCTGCAGCT GCAGCAGGCC CAACTGTGGC TGCCGGTCCA CTACGCCGCA CTCGCGGTGC TGGGCCTCGC GGTGTCGAGG CTCCTGTTCG GCCTCGATCG TCGCGGTCCA CTGCGAAGAA GCGTCCACGC GCTGACGCTG GCCGTCCTGA CCGCGCTGAC CGCGGTGAGC TTCGGTGCGA CAGGCCTGCG CGCCGGCTGG CGTCTGGCCG AGCAACTGCC GGCCGAACTC GAGGGGCGCG ATCTCGCCGT GATCGGCGTG ATCGCCGGGC TGCCGCAGCG CTCGGCCGAG GCCTGGCGCT TCCACTTCGA GCCTCGCTCT GCGCGCATCG GCGACCGCGT GATCGAGCTG CCGTCCCGCC TGTCGCTCGG CTGGTACGCC ACACCCGACG GCCCCGAATT GCCCGCGCTG CGCGCCGGCC AGCGCTGGCA GCTGATGCTG CGCCTGAAGC GCCCGCATGG CCTGTCGAAT CCGCACGGTT TCGACTACGA GCTGTATCTC TTCGAGCAGG GCGTGCGCGC GACCGGCTCG GTGCGTGCGG TGCGCGACAC GCCCAACCGC CTGCTCGGAG ACGGCGAGGG CCACGTCGTC GATCGCCTGC GGCAATCGGT GCGCGACGCG ATCACGGCGC GTGTGGCCGA TGCCTCCTCA GCCGGCGTGC TGGCCGCGCT GGCGGTGGGC GACCAGGCTG CGATCGAGCG CGACGACTGG GCGCTCTATC GCCAGACCGG CGTCGCACAC CTCATGTCCA TCAGCGGCCT GCATGTCACG ATGTTCGCGT GGCTCGCGGG CTTGGGCGTC GGCGCACTGT GGCGGCGCAG CCGCCGTGCG ATGGGGATGT GCCCGACACC GCTCGCTGCG CGCTGGGGTG GCCTGACGGC GGCCTGCGCC TATGCGGTGT TCGCCGGCTG GGGCGTGCCG GCGCAGCGCA CGGTGCTGAT GCTGGCCAGC GTCGTCGTCC TGGGAGCAGC CGGATTGCGC TGGAGCTGGC CGCTGGTCTG GACGGCCGCC ATGGTGGTCG TGACCGCGAT CGATCCCTGG GCCCTGCTGC AGCCGGGCTA CTGGCTGTCC TTCGCGGCCG TGGGCCTGCT GCTGGCCTCG GGCGAGGCGC GTGGGCTCGT CGCGGCGACC AGCGGGCTGG CGACCGCACC GACGCGGCTG CGCTGGCAGG GCGTTGCGGA GTGGCTGGTT CGGCTGCTGT CGGGCGGCCT GCGCACGCAG GCCATCGCGA CGCTGGGTCT TGCGCCCTTG ACGCTGGTGT TCTTCCAGCA GTTGTCGCTG GTCGGCTTCG CCGCCAATCT GGTCGCCATT CCGATCATCA CGCTCGGCGT CACGCCGCTG GCGCTGTTGG GCGTGCTGCT GCCGCCGCTG TGGGGGCCGG CCGCCTGGAC GGTGGCGCAG CTGAACGCCG GCCTGCAGTG GCTCGCCACG CCGGACTGGG CGGTGTGGTC CGTGCCGGCC GCCACACCGT GGGCCGCGGC CTGCGGCCTG CTCGGCGCCG CGCTCGCCCT GCTGCCGCTG CCCTGGACGT CGCGCGCGCT CGGCCTGCCG CTGTTGCTGC CCCTGCTCGC GCCCGCTGTG CCGCGGCCGG CGGAGGGCGC CTACGACATG ACGGTGATCG ACGTCGGCCA GGGCACGTCG GTGCTGTTGC GCACCGCGCG CCACACGCTG CTCTACGACA CCGGGCCGCA GTACTCGCGC GAGTCCGATG CCGGCGGGCG GGTGCTGCTG CCGCTGCTGC GCTCGCTCGG CGAGGAGCGC CTCGACCTGC TCATGTTGAG TCACCGCGAC AGCGACCACG TGGGCGGCGC CGGCGCCGTG CTGCGCGGCC TGCCGGTAAC GCGCCTGGCG AGTTCGCTCG AGGCGAGCCA CGGCCTGCTG GCGCTGGCCG GCACGCTGGG GGTCGATCGC GAGCCCTGCG TGGCGGGCCG GCGGTGGACC TGGGACGGCG TGCAGTTCGA GCTGCTGCAC CCGACCGCCG AGGCGCTGGC GTCGGCGGAG CAGGTGAAGC CCCGGCCCAA CACCCTGAGC TGCGTGCTGC GGATCGGCGG CCGCTGGAGC GGGCAGGCGC ACACGGCACT GCTCACCGGC GACCTGGAGC GCGAGCAGGA GGCGCGCCTG GTGGCCCAGC ATGGCGGGTT GCTGGCGAGC GAGGTGCTGC TGGTGCCTCA CCACGGCAGC AAGACCTCGT CCAGCGCCGC CTTCCTCGAC GCCGTGGCGC CACGCGTGGC GGTCGTGCAG GCCGGCTATC GCAACCGCTT CGGCCATCCG GCGATGGAGG TGCTGGCGCG CTATGCCGAA CGAGGCATCT CGGTGGTGGA CAGCCCGCGC TGCGGCGCCT GGCACTACGG CCCGGCGGGC GCCGCCTGCT GGCGCCCACG GGTCCGGCGC TATTGGCATC ATCCCGACGC AGACAGCACG CACAATGGCG TGGAAGTTGC TAACCCTGTC GGGCCGGAAT CGACCGACTG A
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Protein sequence | MPSSPSLPGL RLLAAGAGVV LGSSLQLQQA QLWLPVHYAA LAVLGLAVSR LLFGLDRRGP LRRSVHALTL AVLTALTAVS FGATGLRAGW RLAEQLPAEL EGRDLAVIGV IAGLPQRSAE AWRFHFEPRS ARIGDRVIEL PSRLSLGWYA TPDGPELPAL RAGQRWQLML RLKRPHGLSN PHGFDYELYL FEQGVRATGS VRAVRDTPNR LLGDGEGHVV DRLRQSVRDA ITARVADASS AGVLAALAVG DQAAIERDDW ALYRQTGVAH LMSISGLHVT MFAWLAGLGV GALWRRSRRA MGMCPTPLAA RWGGLTAACA YAVFAGWGVP AQRTVLMLAS VVVLGAAGLR WSWPLVWTAA MVVVTAIDPW ALLQPGYWLS FAAVGLLLAS GEARGLVAAT SGLATAPTRL RWQGVAEWLV RLLSGGLRTQ AIATLGLAPL TLVFFQQLSL VGFAANLVAI PIITLGVTPL ALLGVLLPPL WGPAAWTVAQ LNAGLQWLAT PDWAVWSVPA ATPWAAACGL LGAALALLPL PWTSRALGLP LLLPLLAPAV PRPAEGAYDM TVIDVGQGTS VLLRTARHTL LYDTGPQYSR ESDAGGRVLL PLLRSLGEER LDLLMLSHRD SDHVGGAGAV LRGLPVTRLA SSLEASHGLL ALAGTLGVDR EPCVAGRRWT WDGVQFELLH PTAEALASAE QVKPRPNTLS CVLRIGGRWS GQAHTALLTG DLEREQEARL VAQHGGLLAS EVLLVPHHGS KTSSSAAFLD AVAPRVAVVQ AGYRNRFGHP AMEVLARYAE RGISVVDSPR CGAWHYGPAG AACWRPRVRR YWHHPDADST HNGVEVANPV GPESTD
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