| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1818 |
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| Symbol | |
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| ID | 6116081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2247329 |
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| End bp | 2249626 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633321 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_001760197 |
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| Protein GI | 170726171 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0856288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.218544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGAT TTATGTTTGG TTTTTGCGTC ACAATACTCT CAGCCATGTT GTGGCCTTCA
TTGCCGACAG CTCAACTTAC CCCCATTTTA GTTGTAATAG GGGTTCTGAT ATTAAAGCGT
GCGCCATTAA TCTCAGGTGT CGTCTTGGCT GTTGCATGGA GTGCGTTTTA TGCGCAGCTG
GTATTAAGCT GGGATGATCA AAGTATAGAC CTTGGCCAGC CTGTAACTGG CGAAATCATA
TCACTAGTAA ATCAAAACAG CGACTGGGTT AGTATGGATT TTCGGCTGTT GGATCATAAT
TCGACAAACT CTTGGCCAAA AAAAATACGT TTGAGTTGGA AAAAAGCCCC TAAATTGGCG
CAAGGTGAGA TCTGGGAGCT GGTGATTAAG CCAAAGCCTA TCACCAGTGT GTTGAATCAA
GGTGGGTATA ATCAACAGAA ATTACTTCTT AGTCGTCATA TCATCAGCAA AGGTAACGTT
ATATCTGGTG AGCGAATTAA GGCAAGTGAT TCTTTGCGTA ACAAGCTCTT ACAAACACTC
AAACCCACCT TAGAAACATT GGCTAATGGC GATCTTATCT TAGCATTACT GCTAGGGGAT
AGGAGCTTGT TGGATGCAGA GCGTTGGCAC GCCCTCAGAG TGACGGGAGC GGGGCATCTG
GTGGCAATCT CCGGTCTGCA CCTCTCGGTT GTTGGAGCTT GGGTGTTTGT CACCTTATCT
AAGTTTCTTA ATCTGATATC TCCTTGTGTT GGGCGACGGA ATTTGATGTT GGCTGCGGCT
TCATCTGCTG TAGCGTGCTG TATTTATGCC TACCTTGCAG GGTTTGCACT ACCAACGATT
CGCGCTTTAA CTATGCTATT GTTATTGGTT TTTTTGACGC TGTTAAACCG ATATTCATCT
TCTTGGGAGC GCTTGTTGTT TGCGCTTTTT CTGATATTAG TTATCGACCC CTTCAGTTGT
TTAAGTGCAG GTTTTTGGCT GTCATTTTCT GCATTATCAA TTATTTTACT GACGCTACAG
GCTCGTCCCA TACCTGTTGC TGATGAGCCT AGCTCCCTGC ACAAGAGAGT GTGGCTTAAG
TTAAGTCTTT TCTGGGCCAT ACAGTGGCGA TTAAGCCTTG GACTGGGTTT ATTGCAGGCA
GTGCTTTTTG GTGGTCTGAC TCTTTATGGG ATCCTATTTA ATTTTATATT TGTTCCTTGG
TTTAGTTTGC TGGTTATTCC TGCCGCTATT TTCACTTTCG TTATCTGGGG GTTAGGTTTA
ACAGCTGGAT TTAATCTGTC CGTCTTGTTT GAATTGGTCG ATAAAACTTT ATGGCCTGTT
ACCCAAGCCT TAGATTTGTT TGTTGTTTTA CCTGGTGCTT GGTTACCTAT TTCAGATCAC
ATGATGTTGG CGCTGTTCTT TCTTCTGTGC GGATCATGGC TTATGGCAAA GCTGAAAAGT
GTGCAGTGGA AGATTATCTC TTCACTCTTG CTTCTACCAT TTATCCTTTC GTTAATGTTT
AGATGGGGAT TGGCCTCAAA GAATCACTGG CAAGTGCACC TGCTCGATGT TGGTCAAGGT
CTCAGTGTCG TTATAGAGAG GGGACAACAT GGATTAATTT ATGACACTGG AGCCCGATAT
GGTCGGACGT TTAGCTATGC AGAAAGAGTC GTGGTGCCCT TTATTCGAGC CAGAGGCATT
ACTGAGGTTG ATTATCTTGT ATTGAGTCAT AGCGATAACG ATCATGCTGG TGGCGCCTCA
ACGCTTATCT CTACTTTTCC AGAGGTTGAA TTAGTGACAG ACATCCCTGA GTATGCCAGC
GTCAATTGCA GACCTAAAAC CATTATATGG CAGAGATTAA GAGTTGAGAT CTTGGCGCCT
CGTGTTGTTG AGAAGGGGAA TAATGGCTCC TGTGTCGTGA AAGTCAGCGA TGAGTATCAT
CAAGTCTTAT TAACTGGTGA TATAGAGAGT AGGGCAGAGC ACGCCTTACT GAGCCTAGGC
GATAAGCTCA ACAGTGAACT GCTTGTGGCG CCACATCATG GTAGCAGAAC CTCCTCAACC
TCTGAGTTTA TCAGGTTGGT TTCTCCTCAG TTAGTGCTCT TCCCTTCAGG GTTTAATAAT
CGTTACGGCT TCCCTAAGCC TGATGTCTTA CGTCGCTATC AGGACCATGG AGCAGAGCAC
CTTATTTCGG GACGACAGGG GCAGATCAGT GTGATTTTTA ATCGAGAACA GCGTGATATT
CGAACATACC GGGCCAATTT AGCCCCTTTT TGGTACAACC GATTGTTTGA ATTTGGTCAG
AATGATAATC CAGAGTAG
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| Protein sequence | MNRFMFGFCV TILSAMLWPS LPTAQLTPIL VVIGVLILKR APLISGVVLA VAWSAFYAQL
VLSWDDQSID LGQPVTGEII SLVNQNSDWV SMDFRLLDHN STNSWPKKIR LSWKKAPKLA
QGEIWELVIK PKPITSVLNQ GGYNQQKLLL SRHIISKGNV ISGERIKASD SLRNKLLQTL
KPTLETLANG DLILALLLGD RSLLDAERWH ALRVTGAGHL VAISGLHLSV VGAWVFVTLS
KFLNLISPCV GRRNLMLAAA SSAVACCIYA YLAGFALPTI RALTMLLLLV FLTLLNRYSS
SWERLLFALF LILVIDPFSC LSAGFWLSFS ALSIILLTLQ ARPIPVADEP SSLHKRVWLK
LSLFWAIQWR LSLGLGLLQA VLFGGLTLYG ILFNFIFVPW FSLLVIPAAI FTFVIWGLGL
TAGFNLSVLF ELVDKTLWPV TQALDLFVVL PGAWLPISDH MMLALFFLLC GSWLMAKLKS
VQWKIISSLL LLPFILSLMF RWGLASKNHW QVHLLDVGQG LSVVIERGQH GLIYDTGARY
GRTFSYAERV VVPFIRARGI TEVDYLVLSH SDNDHAGGAS TLISTFPEVE LVTDIPEYAS
VNCRPKTIIW QRLRVEILAP RVVEKGNNGS CVVKVSDEYH QVLLTGDIES RAEHALLSLG
DKLNSELLVA PHHGSRTSST SEFIRLVSPQ LVLFPSGFNN RYGFPKPDVL RRYQDHGAEH
LISGRQGQIS VIFNREQRDI RTYRANLAPF WYNRLFEFGQ NDNPE
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