More than 300 homologs were found in PanDaTox collection
for query gene TK90_1202 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_1202  DNA internalization-related competence protein ComEC/Rec2  100 
 
 
776 aa  1488    Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.177641 
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  40 
 
 
770 aa  365  1e-99  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  34.47 
 
 
784 aa  301  3e-80  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  32.64 
 
 
800 aa  278  2e-73  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  35 
 
 
835 aa  278  2e-73  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2506  DNA internalization-related competence protein ComEC/Rec2  31.03 
 
 
766 aa  267  5.999999999999999e-70  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  31.2 
 
 
802 aa  266  1e-69  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  35.25 
 
 
772 aa  264  4.999999999999999e-69  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  31.07 
 
 
801 aa  258  4e-67  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp0680  hypothetical protein  26.65 
 
 
735 aa  257  8e-67  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  30.92 
 
 
840 aa  253  8.000000000000001e-66  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl0663  hypothetical protein  26.39 
 
 
735 aa  253  1e-65  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  34.17 
 
 
851 aa  252  2e-65  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_009379  Pnuc_1465  DNA internalization-related competence protein ComEC/Rec2  28.47 
 
 
801 aa  252  2e-65  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  33.39 
 
 
825 aa  246  9e-64  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  33.28 
 
 
822 aa  246  9.999999999999999e-64  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  27.88 
 
 
841 aa  243  9e-63  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00591  DNA internalization-related competence protein ComEC/Rec2  36.8 
 
 
776 aa  239  2e-61  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0903265  n/a   
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  31.9 
 
 
778 aa  238  4e-61  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  31.81 
 
 
845 aa  232  2e-59  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  29.28 
 
 
839 aa  232  2e-59  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  31.84 
 
 
847 aa  231  4e-59  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_007492  Pfl01_4178  DNA internalization-like competence protein ComEC/Rec2  31.43 
 
 
747 aa  228  2e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.145225  normal  0.646667 
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  31.08 
 
 
839 aa  227  6e-58  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5417  DNA internalization-related competence protein ComEC/Rec2  31.32 
 
 
830 aa  224  6e-57  Burkholderia sp. 383  Bacteria  normal  0.560238  normal 
 
 
-
 
NC_010681  Bphyt_2564  DNA internalization-related competence protein ComEC/Rec2  31.65 
 
 
929 aa  223  9.999999999999999e-57  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0267783  normal  0.0941772 
 
 
-
 
NC_010508  Bcenmc03_2129  DNA internalization-related competence protein ComEC/Rec2  32.5 
 
 
829 aa  222  3e-56  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.326593  normal  0.0900672 
 
 
-
 
NC_011071  Smal_1395  DNA internalization-related competence protein ComEC/Rec2  31.72 
 
 
799 aa  221  5e-56  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.751306  normal 
 
 
-
 
NC_008062  Bcen_5966  DNA internalization-related competence protein ComEC/Rec2  32.76 
 
 
829 aa  219  2e-55  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.814009  n/a   
 
 
-
 
NC_008542  Bcen2424_2111  DNA internalization-related competence protein ComEC/Rec2  32.76 
 
 
829 aa  219  2e-55  Burkholderia cenocepacia HI2424  Bacteria  normal  0.261797  n/a   
 
 
-
 
NC_007951  Bxe_A1569  ComEC/Rec2-related protein  31.64 
 
 
801 aa  218  2.9999999999999998e-55  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.304315 
 
 
-
 
NC_010622  Bphy_1443  DNA internalization-related competence protein ComEC/Rec2  31.83 
 
 
843 aa  218  2.9999999999999998e-55  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  34.02 
 
 
861 aa  217  5.9999999999999996e-55  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  32.36 
 
 
819 aa  216  9.999999999999999e-55  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  30.76 
 
 
766 aa  216  9.999999999999999e-55  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  31.9 
 
 
840 aa  215  2.9999999999999995e-54  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_008752  Aave_1352  DNA internalization-related competence protein ComEC/Rec2  33.98 
 
 
948 aa  211  4e-53  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0141053 
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  30.74 
 
 
747 aa  211  5e-53  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2148  DNA internalization-related competence protein ComEC/Rec2  32.3 
 
 
829 aa  209  2e-52  Burkholderia ambifaria AMMD  Bacteria  normal  0.705314  n/a   
 
 
-
 
NC_010322  PputGB1_1473  DNA internalization-related competence protein ComEC/Rec2  33.14 
 
 
738 aa  207  4e-52  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3848  DNA internalization-related competence protein ComEC/Rec2  33.18 
 
 
738 aa  206  2e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3817  DNA internalization-related competence protein ComEC/Rec2  33.54 
 
 
738 aa  205  3e-51  Pseudomonas putida F1  Bacteria  normal  0.925349  normal 
 
 
-
 
NC_002947  PP_1897  DNA internalization-related competence protein ComEC/Rec2  33.91 
 
 
737 aa  204  4e-51  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.000116946 
 
 
-
 
NC_010551  BamMC406_2021  DNA internalization-related competence protein ComEC/Rec2  32.14 
 
 
833 aa  204  4e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.130557 
 
 
-
 
NC_006348  BMA1693  DNA internalization-related competence protein ComEC/Rec2  31.15 
 
 
842 aa  204  6e-51  Burkholderia mallei ATCC 23344  Bacteria  normal  0.891985  n/a   
 
 
-
 
NC_008836  BMA10229_A3120  DNA internalization-related competence protein ComEC/Rec2  31.15 
 
 
856 aa  204  7e-51  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1471  DNA internalization-related competence protein ComEC/Rec2  31.15 
 
 
856 aa  204  7e-51  Burkholderia mallei NCTC 10247  Bacteria  normal  0.300879  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2198  DNA internalization-related competence protein ComEC/Rec2  31.15 
 
 
856 aa  204  7e-51  Burkholderia mallei SAVP1  Bacteria  normal  0.975554  n/a   
 
 
-
 
NC_009074  BURPS668_2581  DNA internalization-related competence protein ComEC/Rec2  31.15 
 
 
856 aa  203  8e-51  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2636  DNA internalization-related competence protein ComEC/Rec2  31.15 
 
 
856 aa  203  9.999999999999999e-51  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0667077  n/a   
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  27.97 
 
 
762 aa  202  9.999999999999999e-51  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1632  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  32.33 
 
 
738 aa  202  1.9999999999999998e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_007434  BURPS1710b_2715  DNA internalization-related competence protein ComEC/Rec2  31.15 
 
 
842 aa  202  1.9999999999999998e-50  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  32.56 
 
 
833 aa  201  6e-50  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008709  Ping_0899  DNA internalization-related competence protein ComEC/Rec2  25.27 
 
 
798 aa  199  2.0000000000000003e-49  Psychromonas ingrahamii 37  Bacteria  normal  0.383263  normal  0.740662 
 
 
-
 
NC_009439  Pmen_1611  DNA internalization-related competence protein ComEC/Rec2  32.95 
 
 
741 aa  196  1e-48  Pseudomonas mendocina ymp  Bacteria  normal  0.804409  normal  0.12587 
 
 
-
 
NC_013456  VEA_003988  predicted hydrolase of the metallo-beta-lactamase superfamily  27.03 
 
 
752 aa  196  2e-48  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1508  DNA internalization-related competence protein ComEC/Rec2  32.44 
 
 
737 aa  193  9e-48  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3158  DNA internalization-related competence protein ComEC/Rec2  29.89 
 
 
860 aa  193  1e-47  Polaromonas sp. JS666  Bacteria  normal  0.0990853  normal  0.446106 
 
 
-
 
NC_010002  Daci_5080  DNA internalization-related competence protein ComEC/Rec2  31.74 
 
 
832 aa  192  2e-47  Delftia acidovorans SPH-1  Bacteria  normal  0.411729  normal  0.0251813 
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  29.92 
 
 
878 aa  192  2.9999999999999997e-47  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_008740  Maqu_1744  DNA internalization-related competence protein ComEC/Rec2  29.81 
 
 
806 aa  191  5.999999999999999e-47  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1205  DNA internalization-related competence protein ComEC/Rec2  30.39 
 
 
845 aa  189  2e-46  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.285892 
 
 
-
 
NC_009783  VIBHAR_01534  hypothetical protein  25.91 
 
 
752 aa  186  1.0000000000000001e-45  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2585  DNA internalization-related competence protein ComEC/Rec2  27.11 
 
 
773 aa  182  2e-44  Shewanella sp. ANA-3  Bacteria  normal  normal  0.13038 
 
 
-
 
NC_009457  VC0395_A1470  ComEC/rec2 family protein  27.73 
 
 
752 aa  180  1e-43  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  24.84 
 
 
860 aa  177  7e-43  Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_009832  Spro_1711  hypothetical protein  29.98 
 
 
737 aa  177  9e-43  Serratia proteamaculans 568  Bacteria  normal  0.0805358  normal 
 
 
-
 
NC_008463  PA14_25480  putative competence protein  32.3 
 
 
741 aa  176  1.9999999999999998e-42  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0767  DNA internalization-related competence protein ComEC/Rec2  27 
 
 
840 aa  175  2.9999999999999996e-42  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1336  DNA internalization-related competence protein ComEC/Rec2  29.07 
 
 
765 aa  173  1e-41  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.62013 
 
 
-
 
NC_009436  Ent638_1432  hypothetical protein  28.4 
 
 
754 aa  172  2e-41  Enterobacter sp. 638  Bacteria  normal  0.0687894  normal 
 
 
-
 
NC_009656  PSPA7_2177  DNA internalization-related competence protein ComEC/Rec2  32.61 
 
 
740 aa  172  3e-41  Pseudomonas aeruginosa PA7  Bacteria  normal  0.589266  n/a   
 
 
-
 
NC_008789  Hhal_1249  ComEC/Rec2-related protein  40.24 
 
 
710 aa  171  5e-41  Halorhodospira halophila SL1  Bacteria  normal  0.435974  n/a   
 
 
-
 
NC_009997  Sbal195_1704  DNA internalization-related competence protein ComEC/Rec2  26.43 
 
 
783 aa  171  6e-41  Shewanella baltica OS195  Bacteria  normal  0.0286912  normal 
 
 
-
 
NC_011313  VSAL_II0736  putative competence-related protein  25.39 
 
 
768 aa  170  1e-40  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1682  DNA internalization-related competence protein ComEC/Rec2  26.02 
 
 
783 aa  167  5.9999999999999996e-40  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2310  hypothetical protein  31.68 
 
 
793 aa  167  1.0000000000000001e-39  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0606  DNA internalization-related competence protein ComEC/Rec2  23.78 
 
 
778 aa  166  2.0000000000000002e-39  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2675  DNA internalization-related competence protein ComEC/Rec2  25.99 
 
 
783 aa  164  7e-39  Shewanella baltica OS223  Bacteria  normal  0.923098  normal  0.0587505 
 
 
-
 
NC_008321  Shewmr4_2423  DNA internalization-related competence protein ComEC/Rec2  25.3 
 
 
773 aa  164  8.000000000000001e-39  Shewanella sp. MR-4  Bacteria  normal  normal  0.395966 
 
 
-
 
NC_009092  Shew_1637  DNA internalization-related competence protein ComEC/Rec2  29.32 
 
 
761 aa  163  9e-39  Shewanella loihica PV-4  Bacteria  normal  0.594703  normal 
 
 
-
 
NC_008322  Shewmr7_2493  DNA internalization-related competence protein ComEC/Rec2  25.17 
 
 
773 aa  163  1e-38  Shewanella sp. MR-7  Bacteria  normal  0.105792  normal  0.137051 
 
 
-
 
NC_009831  Ssed_2827  DNA internalization-related competence protein ComEC/Rec2  26.98 
 
 
767 aa  162  2e-38  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0829289 
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  24.53 
 
 
812 aa  159  2e-37  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_012880  Dd703_2209  hypothetical protein  32.86 
 
 
747 aa  158  3e-37  Dickeya dadantii Ech703  Bacteria  normal  0.785174  n/a   
 
 
-
 
NC_009665  Shew185_1667  DNA internalization-related competence protein ComEC/Rec2  26.24 
 
 
795 aa  155  2e-36  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  28.83 
 
 
763 aa  154  8e-36  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1768  hypothetical protein  27.99 
 
 
763 aa  152  2e-35  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.44185  n/a   
 
 
-
 
NC_011138  MADE_01854  DNA internalization-related competence protein ComEC/Rec2  25.86 
 
 
867 aa  151  4e-35  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2207  hypothetical protein  27.87 
 
 
754 aa  150  1.0000000000000001e-34  Escherichia coli SMS-3-5  Bacteria  normal  0.01066  normal  0.239269 
 
 
-
 
NC_009801  EcE24377A_1011  hypothetical protein  27.7 
 
 
754 aa  149  1.0000000000000001e-34  Escherichia coli E24377A  Bacteria  hitchhiker  0.00460048  n/a   
 
 
-
 
NC_009438  Sputcn32_1556  DNA internalization-related competence protein ComEC/Rec2  24.63 
 
 
774 aa  149  3e-34  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1074  hypothetical protein  27.53 
 
 
754 aa  148  4.0000000000000006e-34  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.361238  normal 
 
 
-
 
NC_010506  Swoo_1818  DNA internalization-related competence protein ComEC/Rec2  25.91 
 
 
765 aa  147  7.0000000000000006e-34  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0856288  normal  0.218544 
 
 
-
 
NC_010320  Teth514_2092  DNA internalization-related competence protein ComEC/Rec2  23.57 
 
 
757 aa  145  3e-33  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000797686  n/a   
 
 
-
 
CP001509  ECD_00917  conserved inner membrane protein  26.49 
 
 
754 aa  145  4e-33  Escherichia coli BL21(DE3)  Bacteria  normal  0.578469  n/a   
 
 
-
 
CP001637  EcDH1_2730  DNA internalization-related competence protein ComEC/Rec2  26.49 
 
 
754 aa  145  4e-33  Escherichia coli DH1  Bacteria  normal  0.170872  n/a   
 
 
-
 
NC_010468  EcolC_2683  hypothetical protein  26.49 
 
 
754 aa  145  4e-33  Escherichia coli ATCC 8739  Bacteria  normal  0.692344  normal  0.226957 
 
 
-
 
NC_012892  B21_00924  hypothetical protein  26.49 
 
 
754 aa  145  4e-33  Escherichia coli BL21  Bacteria  normal  0.630751  n/a   
 
 
-
 
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