Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2803 |
Symbol | |
ID | 1170503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2925405 |
End bp | 2927714 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637344629 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | NP_718381 |
Protein GI | 24374338 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGGCT TTAGTGCCAC CTTACTGTCA GCGATGTTAT GGCCTTCGCT GCTGCCAATT GGTTGTCTAC CCTACTTATG CCTTGGGGCT CTCATCTTAT TCAAAAAAGC ACCTAGCTTA TCAGGCGCAC TCTTTGCGAT GTTTTGGCTA ACAGGGTTTT GCTTAGTGTT ATCTCGACAG GATCTTCCTT TACCACAACA GCCTACACAG GTGAGGGGCG AAATCATATC ACTAGTTAGT CAAAACAGCG ACTGGGTTAG CTTTGATATT GTTGTCGATA AACCAAATTT AATCTTGGGT CCAAGGGCTA AGTTGCGGTT AACGTGGCAA TCCGAGGCGG CACTACGAGT TGGGCAAGTT TGGGACTTCA CCTTTATGCC TAAAAGTATA TCGAGTGTAC TGAATCAAGG AGGGTATAAC GAACAAAAGC AATTGATTAG TCAACATATT GTAGGTAAAG GCCGCGTCAT ACATGCAACG CTTCACGCGG AATATTTCTC ATTAAGAAAT CACTTAATTA CACAACTTAC TCCCAAACTA TCTGGGTTAA TGCAGGGTGA TATTCTGCTG GCGTTAATTC TTGGCGATGA ACAACTTATT TCACCAGCAA AGTGGCAGGC ACTAAGGCAA ACGGGCACGG GTCATCTGGT GTCGATATCA GGATTACATT TATCGGTGAT CACCGCTTGG ATTTGTGCCA GTGCCTTGTT TTTACTCACG CGTTTAGCAC CGCATCCGAG TCGGCGCAAT TTGGTGCTTG CACTTATGTT GGCAGGGAGC AGTGCATTGT TTTATAGCTA TTTAGCGGGC TTTGCTGTAC CAACCCAGCG TGCGTTAGTG ATGATTTTAT TGATCATGTT ATTGAGTTTA TTAAGACGCT ATTCGAGTGC ATGGGACCGT TTACTGTTTG CCTTGTTTGT CGTGTTATTG ATTGATCCAC TCGCTTGTCT GAGTGCAGGT TTTTGGCTGT CGTTTAGTGC GCTGGCGATT ATTTTATATA CCTTAGAAAG TGCACAGGTA GCACGGTCTA TTGATAGTAA CCAGACCTTG TTTGCAACGT CGTGTGTCAG ATTAAGACAG TTTTGGGCAA TTCAATGGCG CTTAAGCCTG ATACTGGGGT TGGTGCAAGC TATCTTTTTT GGGGGAGTGA GTATTCATAG TTTATGGATG AATATGCTGG TTGTGCCTTG GTTCAGTTTG CTTGTTATTC CACTGTCAAT GCTCGCGTTT CTTGTTTGGT GGTTAGGTGA GTTGTTTGGC CAATCGTGGA TGGTACCGTT CCAACTTGCA GATTTATCAC TGATGCCCTT CGGCAAATTA CTTGAGGTCA GTGACGAGTT ACCTGGTCAT TGGCACAGTG TTTCTGACGG TATGTTGGCT TTATGCCTAT GCGTGCTATT GGCGTTGACT TTGTGGAGAT ATATGCCGCA TCGGCGCCAA TATTGGCAGT GGCATTTGAT GGCTGGTCTA CTTTGCGTGC CAATGGCAAT ATTTGTTTTT CAGCGAATTG CTCAAGTGGA AACGGCGCAA TGGACACTGC ATTTACTCGA TGTGGGACAA GGACTGGCTG CGGTGGTTGA AAAGGATACT AGGGCACTTG TCTATGATAC GGGAGCTGCA TTTGGCGAGG ACTTTAGCTA TAGCGAACGG GTGATTATCC CTTTTCTTAA TACCCGAGGG TTAGCTGATA TCGATTTTAT TGTGATCAGC CACGGCGATA ACGACCATGC GGGAGGCGCT CAAGCGTTGG CAAAAGCGTA TCCTCAAGCA AACTGGATTA CCGATGTTGA CCACTTAAAT GGACAGCCTT GTTTACCACA GCAAATTGAG TGGCAACAAC TTACCTTACG CTTTATTTCC CCACAAACCC AAGCTGGTGG CAATAATGCC TCCTGTGTGC TGCGAATCGA TGATGGTCAG CAAAGTCTAT TACTGAGCGG CGATATTGAA AAGGAAACAG AGAGCGTCTT GATTGAACGG GTGAAAGCAG GGGTTATACT TAAAAGTCAG GTGCTTATAG CGCCGCATCA TGGTAGCAGA ACCTCTTCGA CTCAGGCATT TATCGATTCG GTGGCACCGG AGTTAGTATT GTTTCCTGCA GGGTTGAATA ATCGTTATGG CTTCCCAAAA GATGATGTTA TCGAGCGCTA TCAGGCTCGG CAGATCAGAC ACTTAACGAC GGGGATGGAA GGCCAAATTA GCGTCACCTT CGAGCATGGG ACACTTGAAG TAAAAACCTA TCGACGAGAT TTTGCGCCAT TTTGGTATAA CCGCTTGTTT AGATTTGGTG ACTTGATTAA TCCAGAGTAG
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Protein sequence | MFGFSATLLS AMLWPSLLPI GCLPYLCLGA LILFKKAPSL SGALFAMFWL TGFCLVLSRQ DLPLPQQPTQ VRGEIISLVS QNSDWVSFDI VVDKPNLILG PRAKLRLTWQ SEAALRVGQV WDFTFMPKSI SSVLNQGGYN EQKQLISQHI VGKGRVIHAT LHAEYFSLRN HLITQLTPKL SGLMQGDILL ALILGDEQLI SPAKWQALRQ TGTGHLVSIS GLHLSVITAW ICASALFLLT RLAPHPSRRN LVLALMLAGS SALFYSYLAG FAVPTQRALV MILLIMLLSL LRRYSSAWDR LLFALFVVLL IDPLACLSAG FWLSFSALAI ILYTLESAQV ARSIDSNQTL FATSCVRLRQ FWAIQWRLSL ILGLVQAIFF GGVSIHSLWM NMLVVPWFSL LVIPLSMLAF LVWWLGELFG QSWMVPFQLA DLSLMPFGKL LEVSDELPGH WHSVSDGMLA LCLCVLLALT LWRYMPHRRQ YWQWHLMAGL LCVPMAIFVF QRIAQVETAQ WTLHLLDVGQ GLAAVVEKDT RALVYDTGAA FGEDFSYSER VIIPFLNTRG LADIDFIVIS HGDNDHAGGA QALAKAYPQA NWITDVDHLN GQPCLPQQIE WQQLTLRFIS PQTQAGGNNA SCVLRIDDGQ QSLLLSGDIE KETESVLIER VKAGVILKSQ VLIAPHHGSR TSSTQAFIDS VAPELVLFPA GLNNRYGFPK DDVIERYQAR QIRHLTTGME GQISVTFEHG TLEVKTYRRD FAPFWYNRLF RFGDLINPE
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