| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3817 |
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| Symbol | |
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| ID | 5191876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4278875 |
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| End bp | 4281091 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640588284 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_001269125 |
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| Protein GI | 148549023 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.925349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACAG GGATGTTTGC GCTCGCGCTC GGGCTGTTGT GCCTGGGCTT TCTGCCCGCA
TTGCCATCGG TCGGATGGTT GATAACCCTG GCAGCCTGCG CTGTCGGCAG CCTGTTTACC
CGCGTCTGGC CGTTGGGTTG GTTTCTGCTG GGCTTGTGTT GGGCGTGCGG GTCTGCTCAG
CAGGCCCTTG ATGATCGTCT GGCTGCCGGC CTGGAGGGCC GCACCTTGTG GCTGGAGGGG
CGGGTGGCGG GTTTGCCGGC CCGCACTGCA CAAGGCGTGC GTTTCGAGCT GGAAGCGCCA
CGCTCGCGGC GGGCCGAACT GCCTCAGCGT TTGCAACTGA GCTGGTTCGA TGGGCCGCCG
CTGCGGGCGG GCGAGCAGTG GCGGCTGGCG GTGACCTTGC AACGCCCGGC CGGGCTGCTG
AACCCGCACG GGCCTGACCG GGAAGCGCAG TTGCTGGGGC GACGGGTGGG GGCTACGGGT
ACGGTCAAGG CGGGGCAGTT GCTGGCGCCA GTCGCCGGTG GTTGGCGCGA TGCGCTGCGT
CAGCGCTTGC TGATGGTCGA AGCCAATAGC CGACAGGCAG CGCTGGTGGC ACTGGTGCTT
GGCGATGGTG CGGGCCTGGC CCGGGAGGAC TGGCAGACGT TGCAGGCCAC CGGCACGGTG
CACCTGCTGG TGATTTCCGG CCAGCACATC GGCCTGGTCG CCGGTTTGCT CTATGGCCTG
GTCGCCGGGC TGGCACGTTG GGGGCTATGG CCGGCAAGGC TACCGTGGTT ACCCTGGGCC
TGTGGCCTGG CCATGGCCGC AGCGCTGGCC TACGGCTGGC TGGCGGGTGG TGGGGTGCCA
GTGCAGCGGG CCTGTCTGAT GCTGGCCGTG GTGCTGCTCT GGCGTCTGCG CTTTCGCCAC
CTTGGCGCTT TTTTTCCGTT GCTGCTTGCA CTGGTCGCTG TGCTTGTCTT CGAGCCACTG
GCGGCGTTGC TGCCTGGGTT CTGGCTGTCG TTCGCCGCCG TGGCCACGCT CATCTACTGC
TTCAGTGCCC GGTTGGGGGG TTGGCGGCCC TGGCAGGCCT GGACACGAGC GCAATGGGTG
ATCGCCGTCG GCTTGCTGCC GGTGTTGCTG GCCACCGGCT TGCCGGTGAG CCTCAGTGCG
CCGCTGGCCA ACCTTGTGGC GGTGCCGTGG GTCAGCCTGG CGGTCTTGCC ATTGGCGTTG
TTGGGCACGC TGATGTTGCC GCTGGCGGGC GTTGGCGAGG CGTTGCTCTG GCTGGCAGGT
GGCCTGCTGG ATGTGCTGTT CCGCGGGCTG GCGCTGGTGG CGCAACAGCG CCCGGCATGG
GTGCCGCCGG CCCTGCCGTG GTGGGCCGGG CTGCTGGTAT GTCTGGGTGC GCTGTTGCTT
TTGCTGCCTC GTGGTGTGCC GCTGCGCGGG TTGGGAGGGG TGATGCTGCT GGCGCTGTGG
GTACCCAGGG AGCCGGTGCC GTTTGGCCAA ATCGAGGTCT GGCAGCTGGA TGTCGGCCAG
GGGCTGGCGG TGCTCTTGCG TACGCGGCAT CACAGCCTGC TTTACGATGC CGGGCCGGCC
AGGGGGGAAA GCGACTTGGG GGAACGCGTG GTGCTGCCAA CCTTGCGCAA GCTGGGGGTG
GGCGGCCTTG ACGTGATGGT GATCAGCCAT GCGCATGCCG ATCATGCGGG CGGGGCCGAG
GCCATTGCGC GTGGTTTGCC GATCAAGCGG ATAATCGGTG GGGAAGCGCT GGTTGATGTT
CCGTTGGAGC CTTGTGCCAG TGGCGAGCAA TGGGACTGGG ATGGCGTGCG TTTTTCGTTG
TGGCGCTGGG TGGACGGGCA GAGCAGTAAT GACCGTTCCT GTGTGCTGTT GGTCGAGGCG
CAGGGCGAGC GCTTGCTGCT GGCGGGGGAT ATGGAAGCTG CTGCCGAACG GGCGTGGCTG
GCGGACACTG AAGTGCCGCG CATCGACTGG CTGCAGGCAC CGCATCATGG CAGCCGCAGC
TCGTCCACCG AGGCGTTCGT CCGGGCTACC GCACCGCGCG GGGTATTGAT TTCGCGGGGG
CGCAACAACA GCTTCGGGCA CCCGCACGTG CAGGTGGTCG AACGGTATGG GCGGCATGGG
GTGGTGATGC ATGATACGGC GGTGGAGGGG GCATTGCGGT TGGTGCTGGG GCGGCATGGG
GAGGTTGAGG GTGTGCGCCG ACAACGGCGA TTCTGGCGTG ATGTGGGGGG TGGCTGA
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| Protein sequence | MRTGMFALAL GLLCLGFLPA LPSVGWLITL AACAVGSLFT RVWPLGWFLL GLCWACGSAQ
QALDDRLAAG LEGRTLWLEG RVAGLPARTA QGVRFELEAP RSRRAELPQR LQLSWFDGPP
LRAGEQWRLA VTLQRPAGLL NPHGPDREAQ LLGRRVGATG TVKAGQLLAP VAGGWRDALR
QRLLMVEANS RQAALVALVL GDGAGLARED WQTLQATGTV HLLVISGQHI GLVAGLLYGL
VAGLARWGLW PARLPWLPWA CGLAMAAALA YGWLAGGGVP VQRACLMLAV VLLWRLRFRH
LGAFFPLLLA LVAVLVFEPL AALLPGFWLS FAAVATLIYC FSARLGGWRP WQAWTRAQWV
IAVGLLPVLL ATGLPVSLSA PLANLVAVPW VSLAVLPLAL LGTLMLPLAG VGEALLWLAG
GLLDVLFRGL ALVAQQRPAW VPPALPWWAG LLVCLGALLL LLPRGVPLRG LGGVMLLALW
VPREPVPFGQ IEVWQLDVGQ GLAVLLRTRH HSLLYDAGPA RGESDLGERV VLPTLRKLGV
GGLDVMVISH AHADHAGGAE AIARGLPIKR IIGGEALVDV PLEPCASGEQ WDWDGVRFSL
WRWVDGQSSN DRSCVLLVEA QGERLLLAGD MEAAAERAWL ADTEVPRIDW LQAPHHGSRS
SSTEAFVRAT APRGVLISRG RNNSFGHPHV QVVERYGRHG VVMHDTAVEG ALRLVLGRHG
EVEGVRRQRR FWRDVGGG
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