| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1368 |
|---|
| Symbol | |
|---|
| ID | 7317860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1468009 |
|---|
| End bp | 1470321 |
|---|
| Gene Length | 2313 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643616258 |
|---|
| Product | DNA internalization-related competence protein ComEC/Rec2 |
|---|
| Protein accession | YP_002513440 |
|---|
| Protein GI | 220934541 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0658] Predicted membrane metal-binding protein
[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATAC TGGCCCTGGG CTTCCTGCTC GGTGTCTGGC TGCTGCAACT CCAGGCCCAT
CTTCCATCGC CCGTTTGGAT GTTATCAGCC GTACCCGCTG TGCTGCTTGG CGGGGCGCTA
TTGTACCGTC CGCGCGCCCG GAGTCACCGT GCCATCGTTC GGTCACTGCT GTGGCTGCTG
GTTGCCGTGC CTGCCGGCTT TGCCTGGGCC TTGTTCGACG CCGGCCGTCA CCCGGATCCG
CCGTCCGCGG ATCTGCGTCA CGACGGGATC TTCGAGGGCC GCATCGTCTC CCTCCCCGTG
GTCTATGACC ATTCCACGCG CTTCCTGTTC GACATTCCTG CTCCCGACGG GACGAAAACA
CTGCGCCTGC GGGTCTCCTG GTATGGAAGT GTTCCGGATC TGAGGCCGGG TGAGACCTGG
CGGCTGCACC TGCGCCTGCG TGCGCCCCGG GGTTTCATGA ACCCCGGGGG ATTCGACTAC
GAGGGCTGGC TGCGCCAGCA GGGTGTCTGG GCAGTGGCCA CGGTGCGCGT GGCCCCGGAC
AACCAGCGAC TGCAAGCGGC CCGTGGTCTG TCCGGCGGCG TGGACCGCCT GCGCCAGCGC
ATCGTCGAAG GGCTGGACCG AACGCCGGGG GAGGCGCGCT TCGCGGGTGT GCTCATGGCC
CTCGCGGTGG GCCATCGTGC CCGGATTCCC GACGAGCACT GGTCGGTGTT CCTGGCTACG
GGCACCAATC ACCTGATGGC CATCTCGGGT CTGCACATCG GTCTGATGGC GGGCCTGGGT
TACGGCCTGG TCAATCTGTT GTGGCGTCGT CAGCCGGCCC TCGCCCTGTG TCTCCCGGCC
CAGCGGGCGG GTGCCCTGGC GGCGGTCTTC ACCGGGGCCT TCTATGCCAT GCTCGCGGGT
TTCGCCGTGC CCACCCAGCG GGCCCTGGTG ATGCTCTGCG TGGTGATGCT CGCCGTGTGG
CTCGGGCGCA CCGGACAGCC ATGGCGCGTG CTGTCCCTGG CACTCATCGC GGTGCTGCTG
TGGGACCCCG GTGCGGTGCT GGGGGCCGGG TTCTGGCTCT CCTTCGGTGC CGTGGCGGTG
ATCCTGCTCT CCCTGACGGG GCGCCTGCGC CCGCCCACGG GCTGGCGGGC CGCCGCCCGC
ATCCAGGTGC TGGTGGCCCT GGGACTGACA CCACTGCTGC TCGTGTTCTT CAGCCAGACC
TCGGTGGTGG CGCCCCTGGC CAATCTGCTT GCGGTGCCCT GGGTGGGGCT GCTGGTAGTG
CCCCTGACCC TGCTCTCGGC GGCGCTCACC CTGCTGCATC CGCTCGCGGG CCTGCCCGTT
GCCTGGCTGG CGGATGGGCT GATGGGTCTC ATCTGGATCT GGCTTGAGTT TCTCGCCGGG
CTGCCCTTTG CCCGCTGGCA TGCCTCGCGT CCTGCCTGGG CCCTGGCCCT GGCGGCGCTG
GGGATCGCCC TGTGGCTGCT GCCACGGGGG CTGCCGGGCC GGGCGCTGGC GCCGGTGCTG
TGTCTGCCGC TTCTCTGGCC GCCGTCGCCG GAACTGCCCG AGGGCGGGTT GCGCCTGACC
CTGCTGGACG TGGGGCAGGG GCTTGCCGCG GTGGTCCAGA CCCGCCATCA CACCCTGGTC
TATGACACCG GGCCCGGCTT CCTCTCGGGC TTTGATACGG GACAGTCGGT GGTGGTGCCG
TTTCTGCGTC ACCAGGGCGT GGGGCGGGTG GACCGGCTGC TGATCAGCCA CGGCGACAAC
GACCACGCGG GCGGTGCACA GAGCGTCATC GACCTGATCC CCGTACACAA GGTGCAGGGC
GCCTGGGGCC TGCGCCAGGC GCGCGTCCCG GCAATCCCCT GCGAACGGGG CATGGCCTGG
CGCTGGGACG GCGTGGATTT CCGCATCCTG CATCCGCCGC CCCACTGGGG GGATGACAAC
ATCTCCTCCT GCGTGCTGCA GGTGGAGGGG CCGGGTGGCA GGGTGCTGCT GCCCGGTGAC
GTGGACGGCC TCGGCGAGGC GGTGCTGCTG TATTTCGCGG CAGACGGCTT GCGCAGTGAT
GTGCTGGTGC TGCCCCATCA CGGCGCCCGG GACGCGGCCA GCGACGCCTT CCTGGACCGG
GTGTCACCCA CTCTGGCGCT GGTGGGGGCG GGCTTCAACA GCCGTTTCGG GCATCCCGAT
GCCTCGGTGC GCGAGCGGCT GGACATTCGC GGCATTCCCT TGCGCGGCAC GGCGGAGGAG
GGCGCCATCC GCGTGGATCT GCTGCCCGGA GAGCCGCTGC ACAGCCCGCC GGGGTGGCGC
ATCACGGCGC GGCGCTACTG GCACAGCGAG TGA
|
|---|
| Protein sequence | MPILALGFLL GVWLLQLQAH LPSPVWMLSA VPAVLLGGAL LYRPRARSHR AIVRSLLWLL
VAVPAGFAWA LFDAGRHPDP PSADLRHDGI FEGRIVSLPV VYDHSTRFLF DIPAPDGTKT
LRLRVSWYGS VPDLRPGETW RLHLRLRAPR GFMNPGGFDY EGWLRQQGVW AVATVRVAPD
NQRLQAARGL SGGVDRLRQR IVEGLDRTPG EARFAGVLMA LAVGHRARIP DEHWSVFLAT
GTNHLMAISG LHIGLMAGLG YGLVNLLWRR QPALALCLPA QRAGALAAVF TGAFYAMLAG
FAVPTQRALV MLCVVMLAVW LGRTGQPWRV LSLALIAVLL WDPGAVLGAG FWLSFGAVAV
ILLSLTGRLR PPTGWRAAAR IQVLVALGLT PLLLVFFSQT SVVAPLANLL AVPWVGLLVV
PLTLLSAALT LLHPLAGLPV AWLADGLMGL IWIWLEFLAG LPFARWHASR PAWALALAAL
GIALWLLPRG LPGRALAPVL CLPLLWPPSP ELPEGGLRLT LLDVGQGLAA VVQTRHHTLV
YDTGPGFLSG FDTGQSVVVP FLRHQGVGRV DRLLISHGDN DHAGGAQSVI DLIPVHKVQG
AWGLRQARVP AIPCERGMAW RWDGVDFRIL HPPPHWGDDN ISSCVLQVEG PGGRVLLPGD
VDGLGEAVLL YFAADGLRSD VLVLPHHGAR DAASDAFLDR VSPTLALVGA GFNSRFGHPD
ASVRERLDIR GIPLRGTAEE GAIRVDLLPG EPLHSPPGWR ITARRYWHSE
|
|---|
| |