Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1556 |
Symbol | |
ID | 5079516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1771630 |
End bp | 1773954 |
Gene Length | 2325 bp |
Protein Length | 774 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640498689 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_001183080 |
Protein GI | 146292656 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGAT TCATCTTAGG CTTTAGTGCC AGTTTATTAT CAGCGATGTT ATGGCCATCG TTGCCGCCTG TAGCTTATCT ACCCTATCTT TTGGTCGGGG CTTTAATCTT ATATCAAAAA GCACCGCTTT GTTCAGGTGT ACTCTTTGCA ATGCTGTGGC TAACGGTTTT TTGCTTAGGA TTATCTAGGC AGGACCTTCC TGTGCAACAA CAACCTCTAC AGGTGAGGGG CGAAATCATA TCACTAGTTA GCCAAAACAG CGACTGGCTT AGTTTGGATA TTGCCATCAT TAAACCAAAT TTAATCTTAA GACCCCGCGC AAAACTAAGA TTGACATGGA AAGCGCCACC AGACGTGGCA GTCGGGCAGG TTTGGTTATT CACTATTACA CCTAAAAGTG TGTCTAATGT GCTGAACCAA GGCGGATATA ATGAGCAGAA GCAATTAATT AGTCAGCATA TTGTTGGTAA AGGACGAGTG ATAAAAGCGG AATTAATTGA GAGTCAGCCT TCCTTAAGAA ATCAACTCGT ATCGGCATTA GCTCCTCAAT TGGCGCCATT GCAACAGGGA GATCTTCTAC TGGCGTTAAT TTTGGGAGAT AAGCAGCTTA TTTCATCTGA ACGCTGGCAA ATGCTAAGGC AAACGGCAAC AGGGCATTTA GTGGCAATAT CAGGCTTACA TTTATCTGTG GTTACAGCAT GGATTTATGC TGTGATGATA TTTGGATTAA CTCGTTTTGT TCCTCATCCT AGTCGGCGAA ATTGGGTTTT TGCGTTGTTA CTGTCAGGCA TAGGCGCTGC ATTTTATGCT TATTTAGCGG GTTTTGGGAT ATCGACACAA CGTGCACTGG TGATGATATT ACTCTTAATG TTACTCAGTT TATTAAAGCG GTTTTCGAGT CCATGGGAAC GCTTGTTATT TGCTTTATTT ATGGTGCTAT TGATTGATCC TCTTGCTTGT TTAAGTGCTG GGTTTTGGCT GTCATTTTGT GCATTAGCCA TTATTTTGTA TACCTTAGAG GCCGCTCCTA AAGTACACCA ATTAACTAAT GACATCACCC CTTTAGGGCG TGTTCGTGCA GGGTTATTGC AATTTTGGTC TATTCAATGG CGATTGAGTC TTGGGCTTGG ATTCGTGCAA GCGGTGCTTT TTGGTGGCAT AAGTGCACAT AGTCTGTGGA TTAATATGCT TGCAGTACCT TGGTTTAGTT TTGTGGTTAT CCCCATCGCA ATGGCGGGCT TTGTGTGCTG GTGGATTGGT ACTGCGCTTG GATTCTCCTG GATGGGCTTA CTCGAACTAA GCAATTGGGC CTTGATGCCC TATGGACAAT TATTAGCGAT AAGCGGTCAG TTACCCATTC ATTGGCAAGT GGTCTCCGAA AGTGTATTGG CATTGGCATT GTGTGGACTA TTAGGCGGTG TATTATGGCG TTACATCCCT AAACAACGTC TATATTGGCC TTGGCGTTTT ATAGTGAGCT TACTCTTTGT TCCGTTTCTC CTATCATTTT TATTAAAATG GTTACCTTTA AAGTCAGCGA CTTGGTCAAT GCATTTATTA GATGTAGGGC AGGGGTTAGC TGTTGTTATA GAGAAAGAAG GCCGAGGACT AATTTATGAC ACTGGCGCCG CATTTGGAGA GAGTTTTAGT TACAGTCAAC GGGTGATTAT TCCTTTTTTA AATGCTAAAG GGATCCGAGA AATTGACTAT GTGTTTATTA GCCATAGCGA TAACGATCAC GCTGGCGGAG CCTCTGCTCT CTTAGCGGCT TATCCTAAAG CTCAATGGAT AACCGATGTA ACTGAAATAG CTGGAAAGGG CTGTAGACCT CAGCAAATTA ACTGGCAGGA CCTTAAAATA AGCATCATTT TTCCACAAAA ACCAATAGCG GGAAATAATG GTTCTTGTGT CGTGCGCATT GATGATACTC AGCAGCGTGT CTTATTGACG GGGGATATTG AAAAAAATAG TGAAATGAAA TTATTAACGC AAGTCAAAAT GCAGCCGACG ATATTAATGA GTCAAGTCTT AATTGCTCCA CACCACGGTA GCAAAAGCTC ATCAACCGAA GCATTTATTG ATGCAGTTTC CCCTGAGTTT GTTCTTTTCC CCGCGGGGCT CGGAAATCGA TACGGTTTTC CTAAACCCGT GGTGGTTGAT CGTTATCAGG CGCGGAATAT CCCTCATTTA ACCACAGGAA TAGAAGGGCA GATTAGTGTG ATTTTTCGCC ATGATGGTCG AGAAGTGAAA ACCTATAGGC GCGATCTTGC GCCATTTTGG TACAACCGCT TGTTTAGATT TGGTGACTTG ATTAATCCAG AGTAG
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Protein sequence | MNRFILGFSA SLLSAMLWPS LPPVAYLPYL LVGALILYQK APLCSGVLFA MLWLTVFCLG LSRQDLPVQQ QPLQVRGEII SLVSQNSDWL SLDIAIIKPN LILRPRAKLR LTWKAPPDVA VGQVWLFTIT PKSVSNVLNQ GGYNEQKQLI SQHIVGKGRV IKAELIESQP SLRNQLVSAL APQLAPLQQG DLLLALILGD KQLISSERWQ MLRQTATGHL VAISGLHLSV VTAWIYAVMI FGLTRFVPHP SRRNWVFALL LSGIGAAFYA YLAGFGISTQ RALVMILLLM LLSLLKRFSS PWERLLFALF MVLLIDPLAC LSAGFWLSFC ALAIILYTLE AAPKVHQLTN DITPLGRVRA GLLQFWSIQW RLSLGLGFVQ AVLFGGISAH SLWINMLAVP WFSFVVIPIA MAGFVCWWIG TALGFSWMGL LELSNWALMP YGQLLAISGQ LPIHWQVVSE SVLALALCGL LGGVLWRYIP KQRLYWPWRF IVSLLFVPFL LSFLLKWLPL KSATWSMHLL DVGQGLAVVI EKEGRGLIYD TGAAFGESFS YSQRVIIPFL NAKGIREIDY VFISHSDNDH AGGASALLAA YPKAQWITDV TEIAGKGCRP QQINWQDLKI SIIFPQKPIA GNNGSCVVRI DDTQQRVLLT GDIEKNSEMK LLTQVKMQPT ILMSQVLIAP HHGSKSSSTE AFIDAVSPEF VLFPAGLGNR YGFPKPVVVD RYQARNIPHL TTGIEGQISV IFRHDGREVK TYRRDLAPFW YNRLFRFGDL INPE
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