More than 300 homologs were found in PanDaTox collection
for query gene PSPA7_2177 on replicon NC_009656
Organism: Pseudomonas aeruginosa PA7



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1897  DNA internalization-related competence protein ComEC/Rec2  57.89 
 
 
737 aa  691    Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.000116946 
 
 
-
 
NC_010501  PputW619_1508  DNA internalization-related competence protein ComEC/Rec2  57.92 
 
 
737 aa  681    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3848  DNA internalization-related competence protein ComEC/Rec2  57.97 
 
 
738 aa  719    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2177  DNA internalization-related competence protein ComEC/Rec2  100 
 
 
740 aa  1402    Pseudomonas aeruginosa PA7  Bacteria  normal  0.589266  n/a   
 
 
-
 
NC_007005  Psyr_1632  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  58.14 
 
 
738 aa  704    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_007492  Pfl01_4178  DNA internalization-like competence protein ComEC/Rec2  57.7 
 
 
747 aa  736    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.145225  normal  0.646667 
 
 
-
 
NC_009439  Pmen_1611  DNA internalization-related competence protein ComEC/Rec2  63.07 
 
 
741 aa  712    Pseudomonas mendocina ymp  Bacteria  normal  0.804409  normal  0.12587 
 
 
-
 
NC_008463  PA14_25480  putative competence protein  83.66 
 
 
741 aa  1008    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1473  DNA internalization-related competence protein ComEC/Rec2  58.78 
 
 
738 aa  677    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3817  DNA internalization-related competence protein ComEC/Rec2  58.24 
 
 
738 aa  692    Pseudomonas putida F1  Bacteria  normal  0.925349  normal 
 
 
-
 
NC_012560  Avin_14730  DNA internalization-related competence protein ComA  62 
 
 
711 aa  679    Azotobacter vinelandii DJ  Bacteria  normal  0.0603479  n/a   
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  38.89 
 
 
801 aa  372  1e-101  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2506  DNA internalization-related competence protein ComEC/Rec2  36.06 
 
 
766 aa  363  5.0000000000000005e-99  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  36.24 
 
 
784 aa  355  2e-96  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  34.77 
 
 
802 aa  349  1e-94  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  37.47 
 
 
772 aa  335  2e-90  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  39.01 
 
 
825 aa  334  3e-90  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  38.56 
 
 
822 aa  328  2.0000000000000001e-88  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  38.76 
 
 
770 aa  317  4e-85  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  38.03 
 
 
778 aa  316  9.999999999999999e-85  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  36.52 
 
 
840 aa  307  5.0000000000000004e-82  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1465  DNA internalization-related competence protein ComEC/Rec2  30.89 
 
 
801 aa  300  6e-80  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  38.04 
 
 
835 aa  299  1e-79  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  33.99 
 
 
840 aa  298  3e-79  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_010681  Bphyt_2564  DNA internalization-related competence protein ComEC/Rec2  34.98 
 
 
929 aa  296  7e-79  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0267783  normal  0.0941772 
 
 
-
 
NC_010717  PXO_00591  DNA internalization-related competence protein ComEC/Rec2  39.39 
 
 
776 aa  296  7e-79  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0903265  n/a   
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  31.16 
 
 
839 aa  295  3e-78  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  37.35 
 
 
800 aa  294  4e-78  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  34.69 
 
 
839 aa  292  1e-77  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  36.85 
 
 
819 aa  292  2e-77  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  37.58 
 
 
833 aa  292  2e-77  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  37.2 
 
 
747 aa  292  2e-77  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1744  DNA internalization-related competence protein ComEC/Rec2  33.54 
 
 
806 aa  286  1.0000000000000001e-75  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  35.25 
 
 
847 aa  281  3e-74  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  35.03 
 
 
851 aa  279  1e-73  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_009074  BURPS668_2581  DNA internalization-related competence protein ComEC/Rec2  36.3 
 
 
856 aa  279  1e-73  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2636  DNA internalization-related competence protein ComEC/Rec2  36.3 
 
 
856 aa  279  2e-73  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0667077  n/a   
 
 
-
 
NC_006348  BMA1693  DNA internalization-related competence protein ComEC/Rec2  36.17 
 
 
842 aa  278  3e-73  Burkholderia mallei ATCC 23344  Bacteria  normal  0.891985  n/a   
 
 
-
 
NC_007434  BURPS1710b_2715  DNA internalization-related competence protein ComEC/Rec2  36.3 
 
 
842 aa  278  3e-73  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1471  DNA internalization-related competence protein ComEC/Rec2  36.17 
 
 
856 aa  278  4e-73  Burkholderia mallei NCTC 10247  Bacteria  normal  0.300879  n/a   
 
 
-
 
NC_008836  BMA10229_A3120  DNA internalization-related competence protein ComEC/Rec2  36.17 
 
 
856 aa  278  4e-73  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2198  DNA internalization-related competence protein ComEC/Rec2  36.17 
 
 
856 aa  278  4e-73  Burkholderia mallei SAVP1  Bacteria  normal  0.975554  n/a   
 
 
-
 
NC_006368  lpp0680  hypothetical protein  30.62 
 
 
735 aa  276  1.0000000000000001e-72  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_1818  DNA internalization-related competence protein ComEC/Rec2  30.93 
 
 
765 aa  276  1.0000000000000001e-72  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0856288  normal  0.218544 
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  34.48 
 
 
878 aa  275  2.0000000000000002e-72  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_006369  lpl0663  hypothetical protein  31.27 
 
 
735 aa  273  6e-72  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010508  Bcenmc03_2129  DNA internalization-related competence protein ComEC/Rec2  35.01 
 
 
829 aa  273  9e-72  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.326593  normal  0.0900672 
 
 
-
 
NC_007951  Bxe_A1569  ComEC/Rec2-related protein  34.64 
 
 
801 aa  273  1e-71  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.304315 
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  34.59 
 
 
766 aa  272  2e-71  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5966  DNA internalization-related competence protein ComEC/Rec2  34.84 
 
 
829 aa  271  4e-71  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.814009  n/a   
 
 
-
 
NC_008542  Bcen2424_2111  DNA internalization-related competence protein ComEC/Rec2  34.84 
 
 
829 aa  271  4e-71  Burkholderia cenocepacia HI2424  Bacteria  normal  0.261797  n/a   
 
 
-
 
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  29.66 
 
 
860 aa  270  7e-71  Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_008781  Pnap_1205  DNA internalization-related competence protein ComEC/Rec2  34.57 
 
 
845 aa  270  8.999999999999999e-71  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.285892 
 
 
-
 
NC_010622  Bphy_1443  DNA internalization-related competence protein ComEC/Rec2  32.89 
 
 
843 aa  266  1e-69  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2021  DNA internalization-related competence protein ComEC/Rec2  34.79 
 
 
833 aa  266  1e-69  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.130557 
 
 
-
 
NC_008825  Mpe_A2554  putative transporter DNA uptake transmembrane protein  38.35 
 
 
846 aa  265  2e-69  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5417  DNA internalization-related competence protein ComEC/Rec2  35.95 
 
 
830 aa  265  3e-69  Burkholderia sp. 383  Bacteria  normal  0.560238  normal 
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  31.65 
 
 
762 aa  265  3e-69  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2148  DNA internalization-related competence protein ComEC/Rec2  35.4 
 
 
829 aa  263  1e-68  Burkholderia ambifaria AMMD  Bacteria  normal  0.705314  n/a   
 
 
-
 
NC_010002  Daci_5080  DNA internalization-related competence protein ComEC/Rec2  36.46 
 
 
832 aa  261  3e-68  Delftia acidovorans SPH-1  Bacteria  normal  0.411729  normal  0.0251813 
 
 
-
 
NC_007948  Bpro_3158  DNA internalization-related competence protein ComEC/Rec2  34.81 
 
 
860 aa  259  2e-67  Polaromonas sp. JS666  Bacteria  normal  0.0990853  normal  0.446106 
 
 
-
 
NC_009438  Sputcn32_1556  DNA internalization-related competence protein ComEC/Rec2  30.09 
 
 
774 aa  256  9e-67  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  29.54 
 
 
812 aa  254  3e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_011071  Smal_1395  DNA internalization-related competence protein ComEC/Rec2  35.1 
 
 
799 aa  253  6e-66  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.751306  normal 
 
 
-
 
NC_009665  Shew185_1667  DNA internalization-related competence protein ComEC/Rec2  30.84 
 
 
795 aa  253  7e-66  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1352  DNA internalization-related competence protein ComEC/Rec2  36.68 
 
 
948 aa  251  4e-65  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0141053 
 
 
-
 
NC_008577  Shewana3_2585  DNA internalization-related competence protein ComEC/Rec2  32.39 
 
 
773 aa  250  6e-65  Shewanella sp. ANA-3  Bacteria  normal  normal  0.13038 
 
 
-
 
NC_009831  Ssed_2827  DNA internalization-related competence protein ComEC/Rec2  32.19 
 
 
767 aa  250  8e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0829289 
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  30.15 
 
 
841 aa  249  2e-64  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1704  DNA internalization-related competence protein ComEC/Rec2  31.09 
 
 
783 aa  248  3e-64  Shewanella baltica OS195  Bacteria  normal  0.0286912  normal 
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  35.58 
 
 
861 aa  246  6.999999999999999e-64  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_009052  Sbal_1682  DNA internalization-related competence protein ComEC/Rec2  30.94 
 
 
783 aa  245  3e-63  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2675  DNA internalization-related competence protein ComEC/Rec2  30.94 
 
 
783 aa  244  3e-63  Shewanella baltica OS223  Bacteria  normal  0.923098  normal  0.0587505 
 
 
-
 
NC_007963  Csal_1585  DNA internalization-related competence protein ComEC/Rec2  36.18 
 
 
758 aa  241  4e-62  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.882312  n/a   
 
 
-
 
NC_008321  Shewmr4_2423  DNA internalization-related competence protein ComEC/Rec2  30 
 
 
773 aa  238  4e-61  Shewanella sp. MR-4  Bacteria  normal  normal  0.395966 
 
 
-
 
NC_009092  Shew_1637  DNA internalization-related competence protein ComEC/Rec2  31.63 
 
 
761 aa  236  2.0000000000000002e-60  Shewanella loihica PV-4  Bacteria  normal  0.594703  normal 
 
 
-
 
NC_008322  Shewmr7_2493  DNA internalization-related competence protein ComEC/Rec2  30 
 
 
773 aa  234  6e-60  Shewanella sp. MR-7  Bacteria  normal  0.105792  normal  0.137051 
 
 
-
 
NC_009457  VC0395_A1470  ComEC/rec2 family protein  29.72 
 
 
752 aa  230  6e-59  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2209  hypothetical protein  33.65 
 
 
747 aa  223  9.999999999999999e-57  Dickeya dadantii Ech703  Bacteria  normal  0.785174  n/a   
 
 
-
 
NC_008709  Ping_0899  DNA internalization-related competence protein ComEC/Rec2  28.78 
 
 
798 aa  222  1.9999999999999999e-56  Psychromonas ingrahamii 37  Bacteria  normal  0.383263  normal  0.740662 
 
 
-
 
NC_012917  PC1_1768  hypothetical protein  31.18 
 
 
763 aa  220  7.999999999999999e-56  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.44185  n/a   
 
 
-
 
NC_004347  SO_2803  DNA internalization-related competence protein ComEC/Rec2  30.41 
 
 
769 aa  219  2e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_1336  DNA internalization-related competence protein ComEC/Rec2  30.67 
 
 
765 aa  207  4e-52  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.62013 
 
 
-
 
NC_011313  VSAL_II0736  putative competence-related protein  29.55 
 
 
768 aa  205  2e-51  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  30.04 
 
 
763 aa  205  3e-51  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2310  hypothetical protein  31.79 
 
 
793 aa  203  9.999999999999999e-51  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1711  hypothetical protein  32.65 
 
 
737 aa  197  5.000000000000001e-49  Serratia proteamaculans 568  Bacteria  normal  0.0805358  normal 
 
 
-
 
NC_011094  SeSA_A1097  hypothetical protein  30.22 
 
 
756 aa  194  7e-48  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003988  predicted hydrolase of the metallo-beta-lactamase superfamily  29.76 
 
 
752 aa  194  7e-48  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  39.18 
 
 
845 aa  191  4e-47  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1432  hypothetical protein  30.5 
 
 
754 aa  191  5e-47  Enterobacter sp. 638  Bacteria  normal  0.0687894  normal 
 
 
-
 
NC_011149  SeAg_B0989  hypothetical protein  31.96 
 
 
737 aa  189  1e-46  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1081  hypothetical protein  31.46 
 
 
737 aa  186  1.0000000000000001e-45  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.30814  normal  0.0474337 
 
 
-
 
NC_010465  YPK_2666  hypothetical protein  29.42 
 
 
763 aa  185  2.0000000000000003e-45  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1016  hypothetical protein  31.46 
 
 
737 aa  186  2.0000000000000003e-45  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.619127  normal 
 
 
-
 
NC_009708  YpsIP31758_2578  hypothetical protein  29.42 
 
 
763 aa  186  2.0000000000000003e-45  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0251432  n/a   
 
 
-
 
NC_010159  YpAngola_A1958  hypothetical protein  29.28 
 
 
763 aa  184  5.0000000000000004e-45  Yersinia pestis Angola  Bacteria  hitchhiker  0.0001218  normal  0.195131 
 
 
-
 
NC_009783  VIBHAR_01534  hypothetical protein  27.45 
 
 
752 aa  183  1e-44  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011205  SeD_A1048  hypothetical protein  31.8 
 
 
737 aa  182  2e-44  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.486822 
 
 
-
 
NC_009801  EcE24377A_1011  hypothetical protein  28.14 
 
 
754 aa  181  4e-44  Escherichia coli E24377A  Bacteria  hitchhiker  0.00460048  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>