Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2021 |
Symbol | |
ID | 6178958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2250872 |
End bp | 2253373 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641681787 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_001808718 |
Protein GI | 172061066 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.130557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGTGG GGTGGATCGC GTTCGCGCTC GGCGTCGTCG TGCTGCAGCG GCAGGCGGCG TTGCCGGGCG CGAGCGGCTG GGTAATCGGG GCGGCGGTGC TGGCCGGTTG CGGCGCGCTG CTCGCATGGT GTGCGCGGCG CCGTCGAACC CGTGCGATCG TCGCGCTCCG GTGGATGCTG TGCGCAAGCG CCGCCTGTGC GATCGGATTC GGCTATGCGG CCGCGCGCGC CGAATGGCGG CTGCGTGACA GCCTGCCCGT CGAATGGGAA GGGCGCGACA TCGCCGTCAC GGGTGTGATC CGTGGGTTGC CGGTGATCGA CGACACCGGC GCGCGACTGC TGTTGGCCGT CGAATCGAAC GACGCGGGCG TCGCCCGTTT CCCGCCGGTG ATCCGGTTGT CGTGGCGCAC GTACGGCGCG CCCGCCGCAC GCGATGCGAT TCCCGATTTG CGCGCGGCGC AGCGCTGGCG TCTCGTCGTG CGGCTGAAGC GCCCGCATGC CGAGGCGAAT CCCGGCGTGC GCGACAGCGA GGCGGCGTGG CTGGCTGCGG GCATTCGTGC GATCGGCTAT GTCGTCGCGC CCGAGCGCGC GGAATTGCTC GACGCGCGTG CAGCAGGATG GCGCGCATCG ATCGATCGGC TGCGCGACGC GCTGCGCACC CGTATCGGCG ACGCGCTCGG CGATGGGCCC GACGGCGCGC GCCATCGCGG CATCGTCACC GCGCTCGCGG TCGGTGATCA ATCCGGTATC GGCGACGACG ACTGGCGCGT GCTGCGCAAT ACGGGCACGA GCCATCTGGT CGCGATTTCG GGCCTGCACG TCGGGCTCGT CGGCGCGATC GCGGGCGGGA TCGTGTCGAT GGTCTGGCGG CGTCTGCGCT GGCGCGGACG TGCCGCGGTG CTCGTGATGC CGGCGCCCTA CGTCGCTTCC ATGGCGGCGC TGACGGCCGC CGCCGGCTAT GCGGCGCTTG CCGGCTTCAA CGTGCCGGCG CAGCGCGCGT GGTGGATGAT CGCGGCCGGG GCGGCTGCCT ATCTGGCCGG ACGCAGCGTG CCGACTTCCG CGGTGTTGTG CGCGGCGCTC GGCGGCGTGC TGATCGCCGA TCCGTGGGCG GTGCTGTCGG CCGGGTTCTG GCTGTCGTTC GGGGCGGTCG CCGTGATCCT GATGGCGGTG GCGGGCTGGC GCGCGGTGCG TGAATTCGAC GGCGGCGACG ACAGTGCGCC CGATGGCGCC GCCGCGGCCG ATCGCTGGCG CCGGCCGCGC GCATGGTGCA CGCGTGCAGG GCGCCGGATC GCGGAGGCGA CGCGCGTGCA GTACGCGGTG ACGCTCGGCC TCGCGCCGCT CACGGCCGCG TGGTTCGCGC AGATCTCGGT ATCGGGCCCG CTCGGCAATG CGTTCGCGAT TCCGTGGGTC AGTTCCGTCG TGACGCCGAT CGTCCTCGCC GGTATCGGGT TGCCCGCGCC GTTGGACGCA TATGCATTCC GGCTCGCGCA TGCGGCGCTC GAACCGATGA TGGCGCTGCT CCGGCACCTC GCAGACTGGC CGGCCGGCGT GTTCTGGCTG CGCATGCCGG ACTGGCCGGT GCTGGTGCTG GCATGCGTGG GTGTCGGGTG GGCATTGATG CCGCGCGGCT GGCCGCTGCG CTGGGCGGCG CCGCTCACAT GGCTGCCACT GGTCGCACCG GCGCCCGATG CGCCGCCGCC GGGCGGCTTC CGGCTGACCG TGCTCGACGT CGGGCAGGGC GCGTCGGTGC TGATCGAGAC CGCGCGCCGG ACCCTGCTGT TCGATGCGGG GCCGGGGGCG GAGTCGACCC ATGCCGGCAC GCGGATCGTT GCGCCGGCGT TGCGCGCACG CGGAATCCGG ACCATCGATT CGCTGGTGCT CAGCCATGCG GACGCCGATC ACGCGGGCGG CGCGGCGGCC GTCTATGCGG CGGCCGAGGT CCGCCAGCTG CTCGCCGGCA TTGCGCCGCA ACACCGGCTG TGGCGCGACG CGCAGGCGGC CGGCGTGGCC GATCGGCTGC CGTGCGCGGC CGGGCAGCGG TGGACCTGGG ACGGTGTCGT CTTCACGATG CTGTGGCCGC CCGGCGTCGC AGGCGCCGGC CCGTCGAACG AGCAATCGTG TGTGTTGCGC ATCGACGCGG GCGGCACGTC GGCACTGCTG ACGGGCGACA TCGAGGCACG CGCCGAACGG CGATTGGTGG CCGACGCGCG CGACGCACTG GCCGCGCAGA TCCTCGTCGT TCCGCATCAC GGCAGCCGCA CGTCGTCGGT CGAGCCTTTC CTCGATTCGG TCGAGCCGCG CGTCGCGGTA TTTCCTGTAG GCTATCGCAA TCGCTTCGGG CATCCGCACC GGACGGTCCT CGCGCGCTAC GAGGCGCGCG GGATTCCGTT GCCGCGCACC GATCGCGACG GGGCCGTGCG GTTCGACGTC GCGCCGGCGG GCGGCGGGTT CGCGTTCGAG CGTTATCGCG ATGAGCAGCG ACGGTACTGG ATGGACCGGT GA
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Protein sequence | MRVGWIAFAL GVVVLQRQAA LPGASGWVIG AAVLAGCGAL LAWCARRRRT RAIVALRWML CASAACAIGF GYAAARAEWR LRDSLPVEWE GRDIAVTGVI RGLPVIDDTG ARLLLAVESN DAGVARFPPV IRLSWRTYGA PAARDAIPDL RAAQRWRLVV RLKRPHAEAN PGVRDSEAAW LAAGIRAIGY VVAPERAELL DARAAGWRAS IDRLRDALRT RIGDALGDGP DGARHRGIVT ALAVGDQSGI GDDDWRVLRN TGTSHLVAIS GLHVGLVGAI AGGIVSMVWR RLRWRGRAAV LVMPAPYVAS MAALTAAAGY AALAGFNVPA QRAWWMIAAG AAAYLAGRSV PTSAVLCAAL GGVLIADPWA VLSAGFWLSF GAVAVILMAV AGWRAVREFD GGDDSAPDGA AAADRWRRPR AWCTRAGRRI AEATRVQYAV TLGLAPLTAA WFAQISVSGP LGNAFAIPWV SSVVTPIVLA GIGLPAPLDA YAFRLAHAAL EPMMALLRHL ADWPAGVFWL RMPDWPVLVL ACVGVGWALM PRGWPLRWAA PLTWLPLVAP APDAPPPGGF RLTVLDVGQG ASVLIETARR TLLFDAGPGA ESTHAGTRIV APALRARGIR TIDSLVLSHA DADHAGGAAA VYAAAEVRQL LAGIAPQHRL WRDAQAAGVA DRLPCAAGQR WTWDGVVFTM LWPPGVAGAG PSNEQSCVLR IDAGGTSALL TGDIEARAER RLVADARDAL AAQILVVPHH GSRTSSVEPF LDSVEPRVAV FPVGYRNRFG HPHRTVLARY EARGIPLPRT DRDGAVRFDV APAGGGFAFE RYRDEQRRYW MDR
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