| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1611 |
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| Symbol | |
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| ID | 5109269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1774908 |
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| End bp | 1777133 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502839 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_001187107 |
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| Protein GI | 146306642 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.804409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.12587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACAG GGATGTTGGC GCTGGCCTTG GGCCTATTGA CGCTGCGCTT TCTACCCGGT
TTGCCGGCGG GCTGGATACT GGCCGTGGCG GCCATTCTCG GCCTGTCGCT GCTGTTCTCG
CGGCTGTACC CCGTCGGTCT GTTTCTGCTC GGCCTGGCCT GGGCCTGCTG CTCCGCGCAA
TGGGCGCTGG ATGACCGTCT TGACGAAGAG CTGGACGGCC GCACCCTGTG GCTGGAAGGG
CGCGTTGTCG GCTTGCCGGA GGTCTCCGCA GGAGTGGTGC GTTTCCAGCT GGAGGAGGCC
CATTCGCGTC GCGCCGAGCT GCCTGGGCGG CTGCGTCTGG CCTGGTATGG CGGACCGGAA
GTGCGCGGCG GCGAGCGCTG GCGCCTGGCG GTCAACCTCA AGCGTCCGCA CGGGCTGGTC
AATCCACAGA GCTTCGACTA CGAGGCCTGG TTGCTGGCGC GGCGAATCGG CGCCACCGGT
ACCATCAAGG CCGGTGAACG CTTGGCGCCC GCCAGTGGCC TGGGCAGTTG GCGCGACGGC
CTGCGCCAAC GGCTGCTGGC GGCACCTGCC TTCGGCCGCG AGGGTGGGCT GGCGGCGCTC
GTGCTGGGCG ACGGCTCCGG CTTGAGCACG GCCGACTGGC GCCTGCTGCA GCACACCGGC
ACGGTGCATC TGATGGTCAT CTCCGGTCAG CATATCGCCC TGCTGGCGGG CTTTCTCTAT
GGTCTGGTGG CCCTGCTGGC GAAGCTGGGG GCCTGGCCGC GGGGCTGGCC CTGGTTGCCT
GTCGCCTGCG CCCTGGCACT TGCTGGCGCG CTGGCCTACG GCATGCTGGC CGGCTTCGAG
GTGCCGGTAC GCCGGGCCTG CGTGATGGTC GCGCTGGTGC TGCTCTGGCG CCTGCGCTTT
CGTCATCTTG GCGCCTGGTG GCCACTGTTG CTGGCCTTGC TGGTCGTCCT GCTGCTGGAG
CCATTGGCTT CGCTACAGCC CGGCTTCTGG CTGTCGTTCT CGGCGGTGGC GGTGCTGATC
CTGGTGTTCG GCGGTCGGCT CGGCGTGTGG GGCTGGTGGC GCGGTCTGAC GCGTGCGCAA
TGGACCATGG CCATCGGTCT GCTGCCGATG ATGCTGATCC TCGGCTTGCC GGTGAGCAGC
AGCGGGCCGC TGGCCAATCT GCTTGCCGTG CCCTGGGTGG GCTTCGTGAC GGTGCCCCTG
GCCTTGCTCG GTACCCTGCT GTTGCCCGTG CCGGGTGTGG GCGAGGGCCT GCTGTGGTTG
GCGGGTGGCT CGCTGCATGT GCTGTTCGAA TTGCTCGGGC ACATCGCCGA TTGGCTGCCG
GCCTGGTTGC CCAGCCGTCT GCCGCTGTGG GCTTGGCTGC TGGCCTTGGC TGGCGCGTTG
CTGCTGCTCC TGCCCGCCGG CATTGCATTG CGTTTGCCGG GTGTGGCGCT GCTGCTGCCG
GCCCTGTTTC TCCCGTCGAC GGCACCGCAG GAGGGGCACG CCGAGGTCTG GCTGCTGGAC
GTGGGGCAGG GCCTGTCGGT GCTGGTGCGT ACCCGCGAGC ACGCCCTGCT GTACGATGCC
GGCCCGCGTT TCGGCGACTT CGACAGCGGC GAGCGCATCG TTCTACCGTC GCTCCGGGCA
TTGAATCTGC CGCGCCTCGA CATACTTCTA CTCAGTCACG CCGATAACGA TCATGCCGGT
GGCGCGGCCG CCATCCTCGC CGGCATGCCG GTCGCGCGAG TGGTCAGTGG CGAGCCGCAG
CGCCTGGCGC ATCGCGTGCA GTCGGAGCCT TGCGACTCGG GCCAGAGCTG GCAGTGGAAC
GGCGTCGACT TCAGAACCTG GCAGTGGGAA CGGGCCGTCT CGGGCAATCA GGCCTCCTGT
GTCTTACTGG TCGAGGCCGG GGGCGAGCGC CTGCTGCTGA CCGGCGATAT CGACGCGCGC
GCCGAGCACG CCCTGCTGCA GACGGATTTT CCCCTGGCGG CGCGCTGGTT GCTGGCGCCG
CACCACGGCA GTCGCAGCTC ATCCAGCCAG CGCTTCATCG AGGCGGTGGC GCCCGAGCAT
GTGCTGATCG CCCGTGGTCG CCATAACAAT TTCGCTCATC CGCACCCCCA GGTGCTCCAG
CGTTATCAGG CCGCCGGTGT CCAGGTGCAC GACAGTTCGG CGACCGGTGC CCTGCGTGTG
CTGCTGGGCG CCCAGGGGCA GGCGCAGGGG TTGCGAAGCC AGGCACGTTT CTGGCGGGAA
AAATGA
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| Protein sequence | MRTGMLALAL GLLTLRFLPG LPAGWILAVA AILGLSLLFS RLYPVGLFLL GLAWACCSAQ
WALDDRLDEE LDGRTLWLEG RVVGLPEVSA GVVRFQLEEA HSRRAELPGR LRLAWYGGPE
VRGGERWRLA VNLKRPHGLV NPQSFDYEAW LLARRIGATG TIKAGERLAP ASGLGSWRDG
LRQRLLAAPA FGREGGLAAL VLGDGSGLST ADWRLLQHTG TVHLMVISGQ HIALLAGFLY
GLVALLAKLG AWPRGWPWLP VACALALAGA LAYGMLAGFE VPVRRACVMV ALVLLWRLRF
RHLGAWWPLL LALLVVLLLE PLASLQPGFW LSFSAVAVLI LVFGGRLGVW GWWRGLTRAQ
WTMAIGLLPM MLILGLPVSS SGPLANLLAV PWVGFVTVPL ALLGTLLLPV PGVGEGLLWL
AGGSLHVLFE LLGHIADWLP AWLPSRLPLW AWLLALAGAL LLLLPAGIAL RLPGVALLLP
ALFLPSTAPQ EGHAEVWLLD VGQGLSVLVR TREHALLYDA GPRFGDFDSG ERIVLPSLRA
LNLPRLDILL LSHADNDHAG GAAAILAGMP VARVVSGEPQ RLAHRVQSEP CDSGQSWQWN
GVDFRTWQWE RAVSGNQASC VLLVEAGGER LLLTGDIDAR AEHALLQTDF PLAARWLLAP
HHGSRSSSSQ RFIEAVAPEH VLIARGRHNN FAHPHPQVLQ RYQAAGVQVH DSSATGALRV
LLGAQGQAQG LRSQARFWRE K
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