Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2148 |
Symbol | |
ID | 4311013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2358312 |
End bp | 2360801 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638149973 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_774038 |
Protein GI | 115352199 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.705314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGGTGG GGTGGATCGC GTTCGCGCTC GGCGTCGTCG TGCTGCAGCG GCAGGCGGCG TTGCCGGGCG CGAGCGGCTG GATAATCGGG GCGGCGGTGC TGGCCGGTTG CGGCGCGCTG CTCGCATGGT GTGCGCGGCG CCGTCGAACC CGTGAGATCG TCGCGCTCCG GTGGATGCTG TGCGCAAGCG CCGCCTGTGC GATCGGATTC GGCTATGCGG CCGCGCGCGC CGAATGGCGG CTGCGTGACA GCCTGCCCGT CGAATGGGAA GGGCGCGACA TCGCCGTCAC CGGTGTGATC TGCGGGTTGC CGGTGATCGA CGACACCGGC GCGCGACTGC TGCTGGCCGT CGAATCGAAC GACGCGGGCC TGGCCCGTTT CCCGCCGGTG ATCAGATTGT CATGGCGCAC GTACGGCGCG CCCGCCGCAC GCGCTGCGAT TCCCGATTTG CGCGCGGCGC AGCGCTGGCG TCTCGTCGTG CGGCTGAAGC GCCCGCACGC CGAGGCGAAC CCCGGCGTGC GCGACAGCGA GGCGGCGTGG CTCGCCGCGG GCATTCGTGC GATCGGCTAT GTCGTCGCGC CCGAGCGCGC GGAATTGCTC GACGCACGCG CAGCGGGATG GCGCGCATCG ATCGATCGGC TGCGCGACGC GCTGCGCACG CGTATCGGCG ACGGGCTCGG CGACGCGCGC CATCGCGGCA TCGTCACCGC GCTCGCGGTC GGTGATCAAT CCGGTATCGG CGACGACGAC TGGCGCGTGC TGCGCAATAC GGGCACGAGC CATCTGGTCG CGATTTCGGG GCTGCACGTC GGGCTCGTCG GCGCGATCGC GGGCGGGATC GTATCGATGG TCTGGCGGCG TCTGCGCTGG CGCGGACGTG CCGCGGCGCT CGTGATGCCG GCGCCCTACG TCGCTTCCCT GGCGGCGCTG ACGGCCGCCG CCGGCTATGC GGCGCTTGCC GGCTTCAACG TGCCGGCGCA GCGCGCGTGG TGGATGATCG CGGCCGGCGC GGCCGCCTAT CTGGCCGGCC GCAGCGTGCC GACTTCCGCG GTGTTGTGCG CGGCGCTCGG CGGCGTGCTG CTTGCCGATC CGTGGGCGGT GCTGTCGGCC GGGTTCTGGC TGTCGTTCGG CGCGGTCGCC GTGATCCTGA TGGCGGTGGC GGGCTGGCGC GCGGTGCGTG AATTCGACGG CGGCGACGAC AGTGCGCCCG ACGGCGCCGC CGCGGTCGAC CGCCGGCGCC GGCTGCGCGC AGGGTGCACG CGTGCCGGGC GCCGGATCGC GGAGGCGACG CGCGTGCAGT ACGCGGTGAC GCTCGGCCTC GCGCCGCTCA CGGCCGCGTG GTTCGCGCAG ATCTCGGTAT CGGGCCCGCT CGGCAATGCG TTTGCGATTC CGTGGGTCAG TTCCGTCGTG ACGCCGATCG TGCTCGCCGG TATCGGGTTG CCCGCGCCGT TGGACGCATA TGCATTCCGG CTCGCGCATG CGGCGCTCGA ACCGATGATG GCGTTGCTCC GGCACCTCGC CGACTGGCCG GCCGGCGTGT TCTGGCTGCC CATGCCGGAC TGGCCGGTGC TGGTGCTGGC ATGCGTGGGT GTCGGGTGGG CGTTGATGCC GCGCGGCTGG CCGTTGCGCT GGGCGGCGCC GCTCACATGG CTGCCACTGG TCGCACCGGC GCCCGATGCG CCGCCGCCGG GCGGCTTCCG GCTGACCGTG CTCGACGTCG GGCAGGGCGC GTCGGTGCTG GTCGAGACCG CGCGCCGGAC CCTGCTGTTC GACGCGGGGC CGGGGGCGGA GTCGACCCAT GCCGGCACGC GGATCGTTGC GCCGGCGTTG CGCGCACGCG GAATCCGGAC CATCGATTCG CTCGTGCTCA GCCATGCGGA TGCCGATCAC GCGGGCGGCG CGGCGGCCGT CTATGCGGCG GCCGAGGTGC GCCAACTGCT CGCCGGCATT GCGCCGCGGC ACCGGCTGTG GCGCGACGCG CAGGCGGCCG GCGTGGCCGA TCGGCTGCCG TGCGCGGCCG GGCAGCGGTG GACCTGGGAC GGTGTCGTCT TCACGATGCT GTGGCCGCCC GGCGTGGCGG GCGCCGGCCC GTCGAACGAG CAATCGTGTG TGTTGCGCAT CGACGCGGGC GGCACGTCGG CACTGCTGAC GGGCGACATC GAGGCGCGCG CCGAACGGCG ATTGGTGGCC GACGCGCGCG ACGCACTGGC CGCGCAGATC CTCGTCGTTC CGCATCACGG CAGCCGCACG TCGTCGGTCG AGCCTTTCCT CGATTCGGTC GAGCCGCGCG TCGCGGTATT TCCTGTAGGC TATCGCAATC GCTTCGGGCA TCCGCACCGG ACGGTCCTCG CGCGCTACGA GGCGCGCGGG ATTCCGCTGC CGCGCACCGA TCGCGACGGG GCCGTGCGGT TCGACGTCGC GCCGGCGGGC GGCGGGTTCG CGTTCGAGTG TTATCGAGAT GCGCAGCGAC GGTACTGGAT GGACCGGTGA
|
Protein sequence | MRVGWIAFAL GVVVLQRQAA LPGASGWIIG AAVLAGCGAL LAWCARRRRT REIVALRWML CASAACAIGF GYAAARAEWR LRDSLPVEWE GRDIAVTGVI CGLPVIDDTG ARLLLAVESN DAGLARFPPV IRLSWRTYGA PAARAAIPDL RAAQRWRLVV RLKRPHAEAN PGVRDSEAAW LAAGIRAIGY VVAPERAELL DARAAGWRAS IDRLRDALRT RIGDGLGDAR HRGIVTALAV GDQSGIGDDD WRVLRNTGTS HLVAISGLHV GLVGAIAGGI VSMVWRRLRW RGRAAALVMP APYVASLAAL TAAAGYAALA GFNVPAQRAW WMIAAGAAAY LAGRSVPTSA VLCAALGGVL LADPWAVLSA GFWLSFGAVA VILMAVAGWR AVREFDGGDD SAPDGAAAVD RRRRLRAGCT RAGRRIAEAT RVQYAVTLGL APLTAAWFAQ ISVSGPLGNA FAIPWVSSVV TPIVLAGIGL PAPLDAYAFR LAHAALEPMM ALLRHLADWP AGVFWLPMPD WPVLVLACVG VGWALMPRGW PLRWAAPLTW LPLVAPAPDA PPPGGFRLTV LDVGQGASVL VETARRTLLF DAGPGAESTH AGTRIVAPAL RARGIRTIDS LVLSHADADH AGGAAAVYAA AEVRQLLAGI APRHRLWRDA QAAGVADRLP CAAGQRWTWD GVVFTMLWPP GVAGAGPSNE QSCVLRIDAG GTSALLTGDI EARAERRLVA DARDALAAQI LVVPHHGSRT SSVEPFLDSV EPRVAVFPVG YRNRFGHPHR TVLARYEARG IPLPRTDRDG AVRFDVAPAG GGFAFECYRD AQRRYWMDR
|
| |