Gene Bamb_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2148 
Symbol 
ID4311013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2358312 
End bp2360801 
Gene Length2490 bp 
Protein Length829 aa 
Translation table11 
GC content73% 
IMG OID638149973 
ProductDNA internalization-related competence protein ComEC/Rec2 
Protein accessionYP_774038 
Protein GI115352199 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.705314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTGG GGTGGATCGC GTTCGCGCTC GGCGTCGTCG TGCTGCAGCG GCAGGCGGCG 
TTGCCGGGCG CGAGCGGCTG GATAATCGGG GCGGCGGTGC TGGCCGGTTG CGGCGCGCTG
CTCGCATGGT GTGCGCGGCG CCGTCGAACC CGTGAGATCG TCGCGCTCCG GTGGATGCTG
TGCGCAAGCG CCGCCTGTGC GATCGGATTC GGCTATGCGG CCGCGCGCGC CGAATGGCGG
CTGCGTGACA GCCTGCCCGT CGAATGGGAA GGGCGCGACA TCGCCGTCAC CGGTGTGATC
TGCGGGTTGC CGGTGATCGA CGACACCGGC GCGCGACTGC TGCTGGCCGT CGAATCGAAC
GACGCGGGCC TGGCCCGTTT CCCGCCGGTG ATCAGATTGT CATGGCGCAC GTACGGCGCG
CCCGCCGCAC GCGCTGCGAT TCCCGATTTG CGCGCGGCGC AGCGCTGGCG TCTCGTCGTG
CGGCTGAAGC GCCCGCACGC CGAGGCGAAC CCCGGCGTGC GCGACAGCGA GGCGGCGTGG
CTCGCCGCGG GCATTCGTGC GATCGGCTAT GTCGTCGCGC CCGAGCGCGC GGAATTGCTC
GACGCACGCG CAGCGGGATG GCGCGCATCG ATCGATCGGC TGCGCGACGC GCTGCGCACG
CGTATCGGCG ACGGGCTCGG CGACGCGCGC CATCGCGGCA TCGTCACCGC GCTCGCGGTC
GGTGATCAAT CCGGTATCGG CGACGACGAC TGGCGCGTGC TGCGCAATAC GGGCACGAGC
CATCTGGTCG CGATTTCGGG GCTGCACGTC GGGCTCGTCG GCGCGATCGC GGGCGGGATC
GTATCGATGG TCTGGCGGCG TCTGCGCTGG CGCGGACGTG CCGCGGCGCT CGTGATGCCG
GCGCCCTACG TCGCTTCCCT GGCGGCGCTG ACGGCCGCCG CCGGCTATGC GGCGCTTGCC
GGCTTCAACG TGCCGGCGCA GCGCGCGTGG TGGATGATCG CGGCCGGCGC GGCCGCCTAT
CTGGCCGGCC GCAGCGTGCC GACTTCCGCG GTGTTGTGCG CGGCGCTCGG CGGCGTGCTG
CTTGCCGATC CGTGGGCGGT GCTGTCGGCC GGGTTCTGGC TGTCGTTCGG CGCGGTCGCC
GTGATCCTGA TGGCGGTGGC GGGCTGGCGC GCGGTGCGTG AATTCGACGG CGGCGACGAC
AGTGCGCCCG ACGGCGCCGC CGCGGTCGAC CGCCGGCGCC GGCTGCGCGC AGGGTGCACG
CGTGCCGGGC GCCGGATCGC GGAGGCGACG CGCGTGCAGT ACGCGGTGAC GCTCGGCCTC
GCGCCGCTCA CGGCCGCGTG GTTCGCGCAG ATCTCGGTAT CGGGCCCGCT CGGCAATGCG
TTTGCGATTC CGTGGGTCAG TTCCGTCGTG ACGCCGATCG TGCTCGCCGG TATCGGGTTG
CCCGCGCCGT TGGACGCATA TGCATTCCGG CTCGCGCATG CGGCGCTCGA ACCGATGATG
GCGTTGCTCC GGCACCTCGC CGACTGGCCG GCCGGCGTGT TCTGGCTGCC CATGCCGGAC
TGGCCGGTGC TGGTGCTGGC ATGCGTGGGT GTCGGGTGGG CGTTGATGCC GCGCGGCTGG
CCGTTGCGCT GGGCGGCGCC GCTCACATGG CTGCCACTGG TCGCACCGGC GCCCGATGCG
CCGCCGCCGG GCGGCTTCCG GCTGACCGTG CTCGACGTCG GGCAGGGCGC GTCGGTGCTG
GTCGAGACCG CGCGCCGGAC CCTGCTGTTC GACGCGGGGC CGGGGGCGGA GTCGACCCAT
GCCGGCACGC GGATCGTTGC GCCGGCGTTG CGCGCACGCG GAATCCGGAC CATCGATTCG
CTCGTGCTCA GCCATGCGGA TGCCGATCAC GCGGGCGGCG CGGCGGCCGT CTATGCGGCG
GCCGAGGTGC GCCAACTGCT CGCCGGCATT GCGCCGCGGC ACCGGCTGTG GCGCGACGCG
CAGGCGGCCG GCGTGGCCGA TCGGCTGCCG TGCGCGGCCG GGCAGCGGTG GACCTGGGAC
GGTGTCGTCT TCACGATGCT GTGGCCGCCC GGCGTGGCGG GCGCCGGCCC GTCGAACGAG
CAATCGTGTG TGTTGCGCAT CGACGCGGGC GGCACGTCGG CACTGCTGAC GGGCGACATC
GAGGCGCGCG CCGAACGGCG ATTGGTGGCC GACGCGCGCG ACGCACTGGC CGCGCAGATC
CTCGTCGTTC CGCATCACGG CAGCCGCACG TCGTCGGTCG AGCCTTTCCT CGATTCGGTC
GAGCCGCGCG TCGCGGTATT TCCTGTAGGC TATCGCAATC GCTTCGGGCA TCCGCACCGG
ACGGTCCTCG CGCGCTACGA GGCGCGCGGG ATTCCGCTGC CGCGCACCGA TCGCGACGGG
GCCGTGCGGT TCGACGTCGC GCCGGCGGGC GGCGGGTTCG CGTTCGAGTG TTATCGAGAT
GCGCAGCGAC GGTACTGGAT GGACCGGTGA
 
Protein sequence
MRVGWIAFAL GVVVLQRQAA LPGASGWIIG AAVLAGCGAL LAWCARRRRT REIVALRWML 
CASAACAIGF GYAAARAEWR LRDSLPVEWE GRDIAVTGVI CGLPVIDDTG ARLLLAVESN
DAGLARFPPV IRLSWRTYGA PAARAAIPDL RAAQRWRLVV RLKRPHAEAN PGVRDSEAAW
LAAGIRAIGY VVAPERAELL DARAAGWRAS IDRLRDALRT RIGDGLGDAR HRGIVTALAV
GDQSGIGDDD WRVLRNTGTS HLVAISGLHV GLVGAIAGGI VSMVWRRLRW RGRAAALVMP
APYVASLAAL TAAAGYAALA GFNVPAQRAW WMIAAGAAAY LAGRSVPTSA VLCAALGGVL
LADPWAVLSA GFWLSFGAVA VILMAVAGWR AVREFDGGDD SAPDGAAAVD RRRRLRAGCT
RAGRRIAEAT RVQYAVTLGL APLTAAWFAQ ISVSGPLGNA FAIPWVSSVV TPIVLAGIGL
PAPLDAYAFR LAHAALEPMM ALLRHLADWP AGVFWLPMPD WPVLVLACVG VGWALMPRGW
PLRWAAPLTW LPLVAPAPDA PPPGGFRLTV LDVGQGASVL VETARRTLLF DAGPGAESTH
AGTRIVAPAL RARGIRTIDS LVLSHADADH AGGAAAVYAA AEVRQLLAGI APRHRLWRDA
QAAGVADRLP CAAGQRWTWD GVVFTMLWPP GVAGAGPSNE QSCVLRIDAG GTSALLTGDI
EARAERRLVA DARDALAAQI LVVPHHGSRT SSVEPFLDSV EPRVAVFPVG YRNRFGHPHR
TVLARYEARG IPLPRTDRDG AVRFDVAPAG GGFAFECYRD AQRRYWMDR