| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1470 |
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| Symbol | |
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| ID | 5137029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1576762 |
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| End bp | 1579020 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532928 |
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| Product | ComEC/rec2 family protein |
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| Protein accession | YP_001217413 |
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| Protein GI | 147673615 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCATACG GGATTATGAC TCTCTTGTCG AATTACTGGT CTCTCATTTC TTTTTCGATC
ACCGTGCTGT CTGCCCCTTA TTGGCCTTGG ATGCCGAGTT GGGGTTGGGC TTGGTTATGC
CTTATTGTTA TGGTTTTGCT CGGTTATCAC CGAGTTGGCC GTCAATTCCT TGGCTTCGTG
GCTGCCATAC TAACCATTGT GCTACAGGGC AACCTTATAC GAGATCAATC CAATGTGCTC
TATCAAGCAG GGCCGGATAT TATCATAAAA GGCCGTGTTG ACAGCTTTTT TACGCAAACT
CGTTACGCTT ATGAGGGTTT TGTCCTCATT CATGAAGTGA ATGGACAAAC CTTAAACAAA
ATGACTCGCC CTCGCATACG TTTAAGTGCC CCTTTACTGT TACAACCCAA TGATCGCGTC
GAATTTTCGG TAACTCTCAA GCCGATAGTG GGTCGACTCA ACCAAACCGG CTTTGATTTA
GAAGCGCATT ACATGGCGCA ATCTGTCGTC GCACGAGCGG TCGTAAAACC TGACACTGCT
TATCAAATTG TGCAAGAGAG TGGCATAAGG TCAAGTTTGT TTTTTGAGCT AGAGCAATTA
ACGCATACCA GCCCATACCA AGGATTGATC TTAGCCCTGA CGTTTGGCGA GCGAAAAGGT
ATTGATGAGC AAGAGTGGCA AGCCTTACGC AATAGTGGCT TAATTCATTT AGTGGCCATT
TCGGGGCTGC ACATTGGTAT CGCTTTTAGC GTGGGGTATT TTCTCGGGCT CGGCATGATG
CGTTTTCATG CTCAGTTATT GTGGTCCCCT TTTGTGTGTG GGGCTTTACT GGCGGTGCTC
TACGCTTGGC TGGCCGGATT TACGTTGCCT ACTCAGCGTG CATTGATTAT GTGCTTACTC
AATGTGGCGT TGATCATGTT GGCTTTTCCT CTTTCCGCGC TCAAGCGGAT TCTACTCACC
TTAGTCGCGG TCTTGCTTTG GTCGCCATTC GCCTCACTTT CAAACAGTTT CTGGATGTCG
TTTTTGGCGG TCGCGATTGT TCTCTACCAA TTAGCCAGTC AAAGCCAGCG TCAGGTGTGG
TGGAAAGCTC TTCTTTGGGC GCAGGTGTTC CTCGTCTGTT TAATGGCACC GGTCACGGCC
TATTTTTTCG GTGGCTTAAG CGTAACGGCA GTTCTGTACA ATTTGGTGTT TATTCCTTGG
TTTTCGTTGG TGATTGTCCC AGCTTTGTTT TTGGGTCTAT TACTCATGGT GGTATGGCCT
AGTGTGGCCG CCGCTTACTG GCCTTGGGTG GATTGGACGT TTTTACCGCT CGATTGGGCT
TTGCAGTTTG CCGATGTAGG CTGGTGGGTG GTCCCCAGCA AAGTACAAGG TGTGGTCGCA
GCGAGTGTGG CCATCCTCTT GCTTTATCGA TTTATGAGCC TAAAAGCCTG CAGCTTATTA
TTGGGTATGA TTGGCTTATG GTGGTGGTTT CCCTCTCTCA CTCCACTTTG GCGAATGGAT
GTGCTGGATG TTGGACATGG CTTGGCGATT GTGATTGAGC AAGATGAGCG AGCAATTGTC
TACGATACAG GCAGCAGTTG GCCGGGAGGC AGCTATGTGC AAAGCGTGAT TGAGCCTATG
CTCCAACAGC GGGGGCTACG CCAAGTGGAT GGAGTGATTT TAAGTCATCT TGATAATGAT
CATGCGGGTG ATTGGCAAGG TTTAGCTGAG CGCTGGCAAC CCAATTGGAT TCGTGCCAGC
CAACTCGGGA CAGAGTTTAT GCCTTGTATC CGTGGTGAAA GCTGGCAGTG GCAATCTCTC
CATTTTACGG TGTTATGGCC ACCACAAGCG GTTAGCCGAG CGTACAACCA GCATTCGTGT
GTGATTCGTA TGACCGATAC TCAGTCTAAC CATTCTGTAC TGCTCTCCGG GGATGTCACA
GCCATGGGGG AGTGGCTGCT TGCTCGCGAC GGAGCGCAAC TGCAAAGTGA GGTGATGATC
GTGCCGCACC ACGGCAGTAA AACATCGTCC ACCGCAGAGT TTATTGCCCA AGTGAATCCC
AAACTTGCGA TTGCTTCTGT GGCGAAAGAT AACCGCTGGA ATTTGCCTAA TCCGCAAGTC
GTGGCACGTT ATCAAGCTCA GCAAGTTGAG TGGCTAGATA CTGGACACGC TGGGCAAATT
AGCCTCTTTT TCTATCTAGA TCAGCTGGAT TGGTTTACCC AGCGTAGCCT TGGCTGGCAG
CCTTGGTATA GGCAGATGCT GCGTAAAGGA GTAGAATGA
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| Protein sequence | MAYGIMTLLS NYWSLISFSI TVLSAPYWPW MPSWGWAWLC LIVMVLLGYH RVGRQFLGFV
AAILTIVLQG NLIRDQSNVL YQAGPDIIIK GRVDSFFTQT RYAYEGFVLI HEVNGQTLNK
MTRPRIRLSA PLLLQPNDRV EFSVTLKPIV GRLNQTGFDL EAHYMAQSVV ARAVVKPDTA
YQIVQESGIR SSLFFELEQL THTSPYQGLI LALTFGERKG IDEQEWQALR NSGLIHLVAI
SGLHIGIAFS VGYFLGLGMM RFHAQLLWSP FVCGALLAVL YAWLAGFTLP TQRALIMCLL
NVALIMLAFP LSALKRILLT LVAVLLWSPF ASLSNSFWMS FLAVAIVLYQ LASQSQRQVW
WKALLWAQVF LVCLMAPVTA YFFGGLSVTA VLYNLVFIPW FSLVIVPALF LGLLLMVVWP
SVAAAYWPWV DWTFLPLDWA LQFADVGWWV VPSKVQGVVA ASVAILLLYR FMSLKACSLL
LGMIGLWWWF PSLTPLWRMD VLDVGHGLAI VIEQDERAIV YDTGSSWPGG SYVQSVIEPM
LQQRGLRQVD GVILSHLDND HAGDWQGLAE RWQPNWIRAS QLGTEFMPCI RGESWQWQSL
HFTVLWPPQA VSRAYNQHSC VIRMTDTQSN HSVLLSGDVT AMGEWLLARD GAQLQSEVMI
VPHHGSKTSS TAEFIAQVNP KLAIASVAKD NRWNLPNPQV VARYQAQQVE WLDTGHAGQI
SLFFYLDQLD WFTQRSLGWQ PWYRQMLRKG VE
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