Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1470 |
Symbol | |
ID | 5137029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1576762 |
End bp | 1579020 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640532928 |
Product | ComEC/rec2 family protein |
Protein accession | YP_001217413 |
Protein GI | 147673615 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCATACG GGATTATGAC TCTCTTGTCG AATTACTGGT CTCTCATTTC TTTTTCGATC ACCGTGCTGT CTGCCCCTTA TTGGCCTTGG ATGCCGAGTT GGGGTTGGGC TTGGTTATGC CTTATTGTTA TGGTTTTGCT CGGTTATCAC CGAGTTGGCC GTCAATTCCT TGGCTTCGTG GCTGCCATAC TAACCATTGT GCTACAGGGC AACCTTATAC GAGATCAATC CAATGTGCTC TATCAAGCAG GGCCGGATAT TATCATAAAA GGCCGTGTTG ACAGCTTTTT TACGCAAACT CGTTACGCTT ATGAGGGTTT TGTCCTCATT CATGAAGTGA ATGGACAAAC CTTAAACAAA ATGACTCGCC CTCGCATACG TTTAAGTGCC CCTTTACTGT TACAACCCAA TGATCGCGTC GAATTTTCGG TAACTCTCAA GCCGATAGTG GGTCGACTCA ACCAAACCGG CTTTGATTTA GAAGCGCATT ACATGGCGCA ATCTGTCGTC GCACGAGCGG TCGTAAAACC TGACACTGCT TATCAAATTG TGCAAGAGAG TGGCATAAGG TCAAGTTTGT TTTTTGAGCT AGAGCAATTA ACGCATACCA GCCCATACCA AGGATTGATC TTAGCCCTGA CGTTTGGCGA GCGAAAAGGT ATTGATGAGC AAGAGTGGCA AGCCTTACGC AATAGTGGCT TAATTCATTT AGTGGCCATT TCGGGGCTGC ACATTGGTAT CGCTTTTAGC GTGGGGTATT TTCTCGGGCT CGGCATGATG CGTTTTCATG CTCAGTTATT GTGGTCCCCT TTTGTGTGTG GGGCTTTACT GGCGGTGCTC TACGCTTGGC TGGCCGGATT TACGTTGCCT ACTCAGCGTG CATTGATTAT GTGCTTACTC AATGTGGCGT TGATCATGTT GGCTTTTCCT CTTTCCGCGC TCAAGCGGAT TCTACTCACC TTAGTCGCGG TCTTGCTTTG GTCGCCATTC GCCTCACTTT CAAACAGTTT CTGGATGTCG TTTTTGGCGG TCGCGATTGT TCTCTACCAA TTAGCCAGTC AAAGCCAGCG TCAGGTGTGG TGGAAAGCTC TTCTTTGGGC GCAGGTGTTC CTCGTCTGTT TAATGGCACC GGTCACGGCC TATTTTTTCG GTGGCTTAAG CGTAACGGCA GTTCTGTACA ATTTGGTGTT TATTCCTTGG TTTTCGTTGG TGATTGTCCC AGCTTTGTTT TTGGGTCTAT TACTCATGGT GGTATGGCCT AGTGTGGCCG CCGCTTACTG GCCTTGGGTG GATTGGACGT TTTTACCGCT CGATTGGGCT TTGCAGTTTG CCGATGTAGG CTGGTGGGTG GTCCCCAGCA AAGTACAAGG TGTGGTCGCA GCGAGTGTGG CCATCCTCTT GCTTTATCGA TTTATGAGCC TAAAAGCCTG CAGCTTATTA TTGGGTATGA TTGGCTTATG GTGGTGGTTT CCCTCTCTCA CTCCACTTTG GCGAATGGAT GTGCTGGATG TTGGACATGG CTTGGCGATT GTGATTGAGC AAGATGAGCG AGCAATTGTC TACGATACAG GCAGCAGTTG GCCGGGAGGC AGCTATGTGC AAAGCGTGAT TGAGCCTATG CTCCAACAGC GGGGGCTACG CCAAGTGGAT GGAGTGATTT TAAGTCATCT TGATAATGAT CATGCGGGTG ATTGGCAAGG TTTAGCTGAG CGCTGGCAAC CCAATTGGAT TCGTGCCAGC CAACTCGGGA CAGAGTTTAT GCCTTGTATC CGTGGTGAAA GCTGGCAGTG GCAATCTCTC CATTTTACGG TGTTATGGCC ACCACAAGCG GTTAGCCGAG CGTACAACCA GCATTCGTGT GTGATTCGTA TGACCGATAC TCAGTCTAAC CATTCTGTAC TGCTCTCCGG GGATGTCACA GCCATGGGGG AGTGGCTGCT TGCTCGCGAC GGAGCGCAAC TGCAAAGTGA GGTGATGATC GTGCCGCACC ACGGCAGTAA AACATCGTCC ACCGCAGAGT TTATTGCCCA AGTGAATCCC AAACTTGCGA TTGCTTCTGT GGCGAAAGAT AACCGCTGGA ATTTGCCTAA TCCGCAAGTC GTGGCACGTT ATCAAGCTCA GCAAGTTGAG TGGCTAGATA CTGGACACGC TGGGCAAATT AGCCTCTTTT TCTATCTAGA TCAGCTGGAT TGGTTTACCC AGCGTAGCCT TGGCTGGCAG CCTTGGTATA GGCAGATGCT GCGTAAAGGA GTAGAATGA
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Protein sequence | MAYGIMTLLS NYWSLISFSI TVLSAPYWPW MPSWGWAWLC LIVMVLLGYH RVGRQFLGFV AAILTIVLQG NLIRDQSNVL YQAGPDIIIK GRVDSFFTQT RYAYEGFVLI HEVNGQTLNK MTRPRIRLSA PLLLQPNDRV EFSVTLKPIV GRLNQTGFDL EAHYMAQSVV ARAVVKPDTA YQIVQESGIR SSLFFELEQL THTSPYQGLI LALTFGERKG IDEQEWQALR NSGLIHLVAI SGLHIGIAFS VGYFLGLGMM RFHAQLLWSP FVCGALLAVL YAWLAGFTLP TQRALIMCLL NVALIMLAFP LSALKRILLT LVAVLLWSPF ASLSNSFWMS FLAVAIVLYQ LASQSQRQVW WKALLWAQVF LVCLMAPVTA YFFGGLSVTA VLYNLVFIPW FSLVIVPALF LGLLLMVVWP SVAAAYWPWV DWTFLPLDWA LQFADVGWWV VPSKVQGVVA ASVAILLLYR FMSLKACSLL LGMIGLWWWF PSLTPLWRMD VLDVGHGLAI VIEQDERAIV YDTGSSWPGG SYVQSVIEPM LQQRGLRQVD GVILSHLDND HAGDWQGLAE RWQPNWIRAS QLGTEFMPCI RGESWQWQSL HFTVLWPPQA VSRAYNQHSC VIRMTDTQSN HSVLLSGDVT AMGEWLLARD GAQLQSEVMI VPHHGSKTSS TAEFIAQVNP KLAIASVAKD NRWNLPNPQV VARYQAQQVE WLDTGHAGQI SLFFYLDQLD WFTQRSLGWQ PWYRQMLRKG VE
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