Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2564 |
Symbol | |
ID | 6284391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2895170 |
End bp | 2897959 |
Gene Length | 2790 bp |
Protein Length | 929 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642622123 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_001896183 |
Protein GI | 187924541 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0267783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0941772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGCAT GGTGGTGTGG TTTTGCGTTG GGCGTGATCG GGCTGCAACG GCAGGCGGTG TTGCCGGACT GGACGGCGTT GTGCGGGTTG GTGATGCTTG CTTGCGCCGC GGTCGTGGCG GCGGTGTGGG GTTTGGGCGA GGGTAGTCGC GCGGCGGTCG GTGCGGATCA TGCGATGACC CGCGTAACTA GCATTTCGGC TGAGGCCGGA ACTACGAATG CAGATAGAGC TCCGGCTATA GCGGAGCTTG ACGCTGACAC TGAGGTTGGG ACCGTGCCGC GAGTTGGCGC CGCGACAAGG TCAACGGTGG CGCCCGGCGA TTGGCAGCAC GCGTGTGCTA CGACCCTCGC TTCGCTCGTA CTCCGCATCC GCTTCAGCCG GCGCGTGCGT TCCTTCCTGG GCTGGAGCGC CGTGTGGTGC GCGGCCATGT GCGCGGGCTT TGGCTACGCA GCGATCCGTG CGGACATGCG TCTTGCGGTG AGCTTGCCGA ACGCGTGGGA AGCGCGCGAT ATCGAGGTCG TCGGCAGTAT CAAAGGCTTG CCGTCACACG ATGAAAATGG TGCGCGTTTT CTATTCGACG TCGAGTCTGC CGATGCGCCA ATCGACGCTT TCCCTCGCGT CATCCAGCTC TCGTGGATCG CCGAAGATGC GCCGCCGCCT TTGCTCGAGC CGGGCTCACG ATGGCGGCTG GCCGTGCGCC TCAAGCGTCC GCATGGCAAT GCCAACTTCG GCGTGCGCGA TGCTGAGGCG ACTCTGCTCG CACGCAACGT GCGCGCCACC GGTTATGTGA GCGCGCCGGT TCACGCTGTG CGATTGCCTG GTAGGGCGCG CGGCGTCGGC GTGACGGTGG ACCGCTGGCG CGCCGCGCTG CGCGAACGGA TCGATGCAGT GCTCGCTGAC GCGCCGCATC GCGGGATTGT CGTGGCGCTC GCGATCGGCG CGCAGGACGA AGTCAGCGCC GCGGACTGGC TGTTGATGCG CGGCACGGGT ACGAGTCATC TGGTGGCGAT TTCGGGGCTG CATATTGGCT TCGTCGCGGG CCTTGCGGGT TGGCTGGCCG GCGCGGTGTG GCGGCGCTCC GGATGGTTCG GCCGCAACTG GCCGTTGCGG CTGCCGGCAC AAGTCGTCGC GGTGACGGGC GGTGCGCTGT TCGCCGCGCT GCATGCCGCG TTGGCCGGGT TCAACGTGCC GGCGCAGCGT GCGCTGTGGA TGGCCGGGGT CGTCGCGCTC GCGTTTATCA GCGGGCGCAA TGTGCCGCGC TCGGCGGTGC TCGCGTGGGC CTTGGGGCTC GTGCTGGTGG TCGATCCGTG GGCGGTCGTG TCGGCGGGCT TCTGGTTGTC GTTCTGCGCG GTGGCGGCGA TTCTGTACGC CATGTCGGGG CGGCCGCATG TGCAAGATCA CGAACAGCAC CGCGACGAAA CAGCGGACGA CGGCGCTGCG GCGAGCCGCT GGTCGAGACT GGTTATCGTT TTGCGCCGCC GCTTGCGCGA TGCCGGCGCG AGGTTGCGCA GCGCCGCGCA GGTTCAGTTC GCCGTGACGA TCGCGCTTGC GCCGTTGACC ATCTACTGGT TCGCGCAGAT TCCGCTGATC GGCCCGCTCG CGAATGCTTT CGCGATTCCG TGGGTAAGCC TGCTGGTCAC GCCGGCGGTG CTGGCCGGCG TCGCGTTGCC GGCGCCGTTC GACGCCTACG CATGGCATGG CGCACACGCT TTGCTGGACC TGCTGGCGGT GGGCTTGCAA GCGCTATCCG GCCCCGCCTG GACGCTCTGG CGTCTGCCGC AACCGGATGC ATGGACGCTG GCCGCGGCGG CAGTCGGCGT GCTTTGGTGT CTTGCGCCGC GCGGCTGGCC GCTGCGCTGG GCCGCGCCGC TGACCTGGCT GCCGCTGCTG ATACCCGCGC CGTCCGGACC GCCGCACGGC AGTTTCCGTT TGACCGCGCT GGACGTCGGT CAAGGCACCT CGGTGCTGGT CGAAACGACG CATCACACGT TGCTGTTCGA TACCGGACCG GGACCGGAGT CGACTCACGC GGGCGAGCGG GTGGTCGTGC CGTTTTTACA GGCGCGTGGC GTGACGGCGC TCGATACGTT GATCGTGAGC CACGCCGACT CCGATCATTC GGGCGGCGCG CCCGCCGTGC TGGACGCGAT CGATGTGCAT CAAATGGTGG CGGCATTGGC GCCGTCGAAT GCGCTGTGGT CGAATGCGCG GCAACGCGGC GCCGACACGC TGCCTTGTGC GGCGGGTCAG CGCTGGCAGT GGGACGGCGT GGAGTTCGCA ATGCTCTGGC CGGACGCCGG GCCGCTGCAA GGCAAGCCGA ATGCGCATTG CTGCGTGCTG CGGGTCAGCA CTTTGCCGAC CGCCGCAAGC CCGTCGATCA GCCATACTCA TACAGAACCG CCGCGCATGA CGGCCTTGCT CACGGCGGAC ATCGAGGCGC CCGTCGAACG CGTTCTGCTC GCGCGCGATC GCGAGGCGTT GCGCGCACAA GTGCTGGTCG TGCCGCATCA CGGCAGCAAG ACTTCGTCGA CCGAGCCGTT CCTCGACTCT ATCGATCCGC TCATCGCGCT ATTTCAGGTA GGCTATCGCA ACCGTTTTCA TCATCCGAAT GCGGGTGTGT TCGAGCGCTA CAAGGCGCGA CGGATCGAGC TCGGGCGCAG CGACGTGGAC GGTGCGGTGC GCGTCGAGGT GAACCCGGGC GGCGAGATAA GCGACGCCAC CCGCAGCAGC GCCACGGTCA CGCTCGAGCG CTATCGCGAC ACGCAGCGCC GCTACTGGAT GGATCGCTGA
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Protein sequence | MRAWWCGFAL GVIGLQRQAV LPDWTALCGL VMLACAAVVA AVWGLGEGSR AAVGADHAMT RVTSISAEAG TTNADRAPAI AELDADTEVG TVPRVGAATR STVAPGDWQH ACATTLASLV LRIRFSRRVR SFLGWSAVWC AAMCAGFGYA AIRADMRLAV SLPNAWEARD IEVVGSIKGL PSHDENGARF LFDVESADAP IDAFPRVIQL SWIAEDAPPP LLEPGSRWRL AVRLKRPHGN ANFGVRDAEA TLLARNVRAT GYVSAPVHAV RLPGRARGVG VTVDRWRAAL RERIDAVLAD APHRGIVVAL AIGAQDEVSA ADWLLMRGTG TSHLVAISGL HIGFVAGLAG WLAGAVWRRS GWFGRNWPLR LPAQVVAVTG GALFAALHAA LAGFNVPAQR ALWMAGVVAL AFISGRNVPR SAVLAWALGL VLVVDPWAVV SAGFWLSFCA VAAILYAMSG RPHVQDHEQH RDETADDGAA ASRWSRLVIV LRRRLRDAGA RLRSAAQVQF AVTIALAPLT IYWFAQIPLI GPLANAFAIP WVSLLVTPAV LAGVALPAPF DAYAWHGAHA LLDLLAVGLQ ALSGPAWTLW RLPQPDAWTL AAAAVGVLWC LAPRGWPLRW AAPLTWLPLL IPAPSGPPHG SFRLTALDVG QGTSVLVETT HHTLLFDTGP GPESTHAGER VVVPFLQARG VTALDTLIVS HADSDHSGGA PAVLDAIDVH QMVAALAPSN ALWSNARQRG ADTLPCAAGQ RWQWDGVEFA MLWPDAGPLQ GKPNAHCCVL RVSTLPTAAS PSISHTHTEP PRMTALLTAD IEAPVERVLL ARDREALRAQ VLVVPHHGSK TSSTEPFLDS IDPLIALFQV GYRNRFHHPN AGVFERYKAR RIELGRSDVD GAVRVEVNPG GEISDATRSS ATVTLERYRD TQRRYWMDR
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