| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2389 |
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| Symbol | |
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| ID | 4279300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2850826 |
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| End bp | 2853321 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135185 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_751072 |
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| Protein GI | 114563559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00142105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGAT TTATCTATGG CTTTTGCGCC TGTTCTTTAT CAGCGATGTT ATGGCCTTCG
CTGGCACCAA TATGGTGTTT GCCCATTCTA TTCTTGGCTA TGCTTCTTTG TCTTCGCAAA
GGGCCGCTTA TGGCCGGCTG TTTATTCGCC GTCATTTGGC TGAGCCTGTT ATTTCATTGT
CTATATATGC ATCAATATGT TGAAAAGTCG CAACAAATCG AGTTTAAGGC GCAGATAGTA
TCACTAGTTA GCCAAAACCG CGACTGGATT AGTTTTGATG TGCGCGTTAT AGCAAAACCC
CATCAAGACG CATTTTTTGA GACGTTGGCG CTTAATAATG TGCAGCGATA TTACCGATTA
ACATGGCAAA AGCCAGATAA AATTGTTGTT GGCCAAATAT GGCAATTTAA TGCAAAAGTT
AAAGGGATCT CAAGCATCCA AAATCAAGGC GGTTTTAACC AGCAAAAGTA TTTTATTAGC
CAGCATATTG TCGCTAAAGG TCGTGTTAAG CAAGCAGAGT TGCTTAGTCA CAGTAGCTCA
ATGCGTCAAC AAATCATGGA AATATTATCA CCTTTATTGG GGCAGTTTTC TCATGGCGAT
ATTTTACACG CTTTGATTTT TGGCGATAAA AGCGCATTAA CCTCTCAACG TTGGCAGCAG
TTGCAACAGA CCGGAGCAGG GCATTTAGTC GCGATTTCAG GTTTACATCT GTCGGTAGTT
TTCGGATTAT TTTATGGCAT TTTGATTGGG ATAAGTCGCT ATGCATTTTC ATGGCAGCAT
TTGGGTAAAA TCCAACTGGC AATGGTATTT GCAGCAGTAT TTACCTTAGG TTATGGCTAC
TTATCGGGTT TTGCTATTGC CACTCAACGC GCATTGTTGA TGCTGTTTTT ATTGTTGATA
TTTAGTTTTA TTAAACAATT TAGTCATCAT TGGGATCGAC TTGCTTATGC ATTATTTTTT
GTGATGTTGG TGGATCCCTT TGCATCGTTA GGTGCTGGGT TGTGGTTATC TTTTGGGGCA
TTGGTGATTA TTCTATTGTC GGTGAAACCT GACTCGGTAG ATCAGCCATC TAACCTAGAC
CCTGTTCTCG TTAATCGAAG CATTGATGTC CCCGAGCTTA CTTTGACTGA CAGATGTATT
GAAAAAGTTA TGCTGCTGAA GGATAACATT TTACATGGAC TCGGTATTTT GTGGTCGATT
CAATGGCGTT TAGCGCTGTT GCTCGGCATT TTGCAAGGGA TATTATTTGG TGGCATTGCA
CCTCATAGTA TTTGGTTGAA TATGCTGCTG GTGCCTTGGT TTAGCTTGGT GGTTATTCCA
TTAACCCTGT TGAGTTTTTG CATTTGGTTA CTGGCGTTAT GGATTTTGTG GGTGCTAGGC
ATTGATACTG CTTCATTGCA AAGTTTTAGT TTAATGATAT TTCAGTGGGC TAATTTAAGT
TTGGAGCCTT TTGCATGGTT ATTACAGCTG AGCGATGATT TGCCGTTAAA TCAACTGGTG
CTAACCGAGA AAGAGCTAGC GGGGGGAATG TTTTTTGTTT TAGCATTGAT GTTGTTGGTG
CTACGCAGAT ACGTACCGAG TCAGCGAAAA TGGAGTTATA GCGTTGTAGT GGCAGTACTG
ATGCTGCCCA TCATTATGAA CAAGTTAGTG ACTCATGAGA TAGTGTTTTC ACCAGCGTCT
TCGTTAGGTG AAACACCATG GCAACTTCAT GCCATCGATG TGGCTCAAGG AATGGCAGTG
GTTTTACAAC AAGGGCAGCA CGGAATTATT TACGACACTG GCGCTGCTTA TGGGGAGTTC
AGTTATGCTC AACGTGCAAT ATTGCCTTTT TTGGCCAGTA AAGGTATCCG TTATGTTGAT
TATATTGTTG TGAGTCATGA CGATAATGAT CATGCTGGTG GATTAAACGT GTTGGTCGAT
CAATTTCCAC AGGCGGCATT AATTGCTGAT TTTTCAGCGT CAGCCTCAGC GTTAACTGAA
TCATCACATA GCGTGCGAAC TTGTGACGGT GAATTATTGT GGCGCGGCGT ACAATTGAGT
TTTATCCCAA ATATTTTAAG CGCCAATAGT AATGATAATA ACCGTTCCTG CGTGGTTAAA
TTGTTTGACG GTCAGTCAAC GGTGTTGTTA ACCGGAGACA TTGAAGCTCC ACGAGAGCAA
GCACTTTTGG CGGTAAATGC AGATATTCAA GCCGATATTT TATTCGTTCC GCACCACGGT
AGTCGCACCT CATCTACCCC AGCCTTTATT GATAGTGTTA ACCCCCAATT AGCTATTTTT
ACCGCTGGCT TCTCTAATCA ATATGGGTTT CCTAAACCAG ATATTATGGC GAGGTATCAA
CAACAAGGCA GTAAAATGTT ACAAACTGGC CATGTCGGCC AAATAAGCAT CAACTTCACA
ACTGAAGGCT ACAAAGTAAC CACTTACCGT CAGCAAATTG CCCCATTTTG GTATAACCGT
TTGTTTAGAT TTGGTGAGTC ACTTAAAGCA GAGTAG
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| Protein sequence | MNRFIYGFCA CSLSAMLWPS LAPIWCLPIL FLAMLLCLRK GPLMAGCLFA VIWLSLLFHC
LYMHQYVEKS QQIEFKAQIV SLVSQNRDWI SFDVRVIAKP HQDAFFETLA LNNVQRYYRL
TWQKPDKIVV GQIWQFNAKV KGISSIQNQG GFNQQKYFIS QHIVAKGRVK QAELLSHSSS
MRQQIMEILS PLLGQFSHGD ILHALIFGDK SALTSQRWQQ LQQTGAGHLV AISGLHLSVV
FGLFYGILIG ISRYAFSWQH LGKIQLAMVF AAVFTLGYGY LSGFAIATQR ALLMLFLLLI
FSFIKQFSHH WDRLAYALFF VMLVDPFASL GAGLWLSFGA LVIILLSVKP DSVDQPSNLD
PVLVNRSIDV PELTLTDRCI EKVMLLKDNI LHGLGILWSI QWRLALLLGI LQGILFGGIA
PHSIWLNMLL VPWFSLVVIP LTLLSFCIWL LALWILWVLG IDTASLQSFS LMIFQWANLS
LEPFAWLLQL SDDLPLNQLV LTEKELAGGM FFVLALMLLV LRRYVPSQRK WSYSVVVAVL
MLPIIMNKLV THEIVFSPAS SLGETPWQLH AIDVAQGMAV VLQQGQHGII YDTGAAYGEF
SYAQRAILPF LASKGIRYVD YIVVSHDDND HAGGLNVLVD QFPQAALIAD FSASASALTE
SSHSVRTCDG ELLWRGVQLS FIPNILSANS NDNNRSCVVK LFDGQSTVLL TGDIEAPREQ
ALLAVNADIQ ADILFVPHHG SRTSSTPAFI DSVNPQLAIF TAGFSNQYGF PKPDIMARYQ
QQGSKMLQTG HVGQISINFT TEGYKVTTYR QQIAPFWYNR LFRFGESLKA E
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