More than 300 homologs were found in PanDaTox collection
for query gene Psyr_1632 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_1611  DNA internalization-related competence protein ComEC/Rec2  63.92 
 
 
741 aa  783    Pseudomonas mendocina ymp  Bacteria  normal  0.804409  normal  0.12587 
 
 
-
 
NC_002947  PP_1897  DNA internalization-related competence protein ComEC/Rec2  62.14 
 
 
737 aa  787    Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.000116946 
 
 
-
 
NC_010501  PputW619_1508  DNA internalization-related competence protein ComEC/Rec2  62.82 
 
 
737 aa  784    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3848  DNA internalization-related competence protein ComEC/Rec2  89.16 
 
 
738 aa  1181    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1632  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  100 
 
 
738 aa  1421    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_007492  Pfl01_4178  DNA internalization-like competence protein ComEC/Rec2  69.38 
 
 
747 aa  954    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.145225  normal  0.646667 
 
 
-
 
NC_010322  PputGB1_1473  DNA internalization-related competence protein ComEC/Rec2  62.47 
 
 
738 aa  773    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3817  DNA internalization-related competence protein ComEC/Rec2  62.06 
 
 
738 aa  776    Pseudomonas putida F1  Bacteria  normal  0.925349  normal 
 
 
-
 
NC_012560  Avin_14730  DNA internalization-related competence protein ComA  63.29 
 
 
711 aa  726    Azotobacter vinelandii DJ  Bacteria  normal  0.0603479  n/a   
 
 
-
 
NC_008463  PA14_25480  putative competence protein  56.45 
 
 
741 aa  636    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2177  DNA internalization-related competence protein ComEC/Rec2  58.14 
 
 
740 aa  710    Pseudomonas aeruginosa PA7  Bacteria  normal  0.589266  n/a   
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  37.29 
 
 
784 aa  389  1e-106  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2506  DNA internalization-related competence protein ComEC/Rec2  37.53 
 
 
766 aa  380  1e-104  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  37.4 
 
 
801 aa  369  1e-101  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  39.11 
 
 
840 aa  357  5.999999999999999e-97  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  37.18 
 
 
772 aa  352  2e-95  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  35.39 
 
 
802 aa  351  2e-95  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  40.03 
 
 
770 aa  350  4e-95  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  38.02 
 
 
825 aa  336  7.999999999999999e-91  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  37.11 
 
 
819 aa  335  1e-90  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  38.33 
 
 
822 aa  333  1e-89  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1465  DNA internalization-related competence protein ComEC/Rec2  33.93 
 
 
801 aa  329  1.0000000000000001e-88  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5417  DNA internalization-related competence protein ComEC/Rec2  35.23 
 
 
830 aa  325  2e-87  Burkholderia sp. 383  Bacteria  normal  0.560238  normal 
 
 
-
 
NC_010508  Bcenmc03_2129  DNA internalization-related competence protein ComEC/Rec2  36.22 
 
 
829 aa  324  3e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.326593  normal  0.0900672 
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  36.84 
 
 
851 aa  323  9.000000000000001e-87  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  36.05 
 
 
878 aa  317  4e-85  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_008062  Bcen_5966  DNA internalization-related competence protein ComEC/Rec2  36.46 
 
 
829 aa  316  8e-85  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.814009  n/a   
 
 
-
 
NC_008542  Bcen2424_2111  DNA internalization-related competence protein ComEC/Rec2  36.46 
 
 
829 aa  316  8e-85  Burkholderia cenocepacia HI2424  Bacteria  normal  0.261797  n/a   
 
 
-
 
NC_010717  PXO_00591  DNA internalization-related competence protein ComEC/Rec2  38.16 
 
 
776 aa  315  1.9999999999999998e-84  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0903265  n/a   
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  34.88 
 
 
833 aa  315  1.9999999999999998e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_1205  DNA internalization-related competence protein ComEC/Rec2  36.24 
 
 
845 aa  311  4e-83  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.285892 
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  36.84 
 
 
800 aa  310  5.9999999999999995e-83  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  36.46 
 
 
766 aa  307  4.0000000000000004e-82  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  32.55 
 
 
839 aa  306  9.000000000000001e-82  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_007948  Bpro_3158  DNA internalization-related competence protein ComEC/Rec2  36.42 
 
 
860 aa  305  2.0000000000000002e-81  Polaromonas sp. JS666  Bacteria  normal  0.0990853  normal  0.446106 
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  35.4 
 
 
835 aa  305  2.0000000000000002e-81  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  35.63 
 
 
778 aa  303  6.000000000000001e-81  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_2636  DNA internalization-related competence protein ComEC/Rec2  36.33 
 
 
856 aa  303  6.000000000000001e-81  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0667077  n/a   
 
 
-
 
NC_009074  BURPS668_2581  DNA internalization-related competence protein ComEC/Rec2  36.33 
 
 
856 aa  303  6.000000000000001e-81  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2715  DNA internalization-related competence protein ComEC/Rec2  36.33 
 
 
842 aa  303  9e-81  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2198  DNA internalization-related competence protein ComEC/Rec2  36.46 
 
 
856 aa  302  2e-80  Burkholderia mallei SAVP1  Bacteria  normal  0.975554  n/a   
 
 
-
 
NC_006348  BMA1693  DNA internalization-related competence protein ComEC/Rec2  36.46 
 
 
842 aa  302  2e-80  Burkholderia mallei ATCC 23344  Bacteria  normal  0.891985  n/a   
 
 
-
 
NC_008740  Maqu_1744  DNA internalization-related competence protein ComEC/Rec2  33.96 
 
 
806 aa  301  2e-80  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3120  DNA internalization-related competence protein ComEC/Rec2  36.46 
 
 
856 aa  302  2e-80  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1471  DNA internalization-related competence protein ComEC/Rec2  36.46 
 
 
856 aa  302  2e-80  Burkholderia mallei NCTC 10247  Bacteria  normal  0.300879  n/a   
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  36.99 
 
 
747 aa  301  3e-80  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  34.02 
 
 
839 aa  301  3e-80  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2148  DNA internalization-related competence protein ComEC/Rec2  35.75 
 
 
829 aa  301  4e-80  Burkholderia ambifaria AMMD  Bacteria  normal  0.705314  n/a   
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  33.62 
 
 
840 aa  299  1e-79  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_010002  Daci_5080  DNA internalization-related competence protein ComEC/Rec2  34.32 
 
 
832 aa  299  1e-79  Delftia acidovorans SPH-1  Bacteria  normal  0.411729  normal  0.0251813 
 
 
-
 
NC_008825  Mpe_A2554  putative transporter DNA uptake transmembrane protein  34.19 
 
 
846 aa  298  3e-79  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2021  DNA internalization-related competence protein ComEC/Rec2  35.02 
 
 
833 aa  298  4e-79  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.130557 
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  37.88 
 
 
861 aa  296  1e-78  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  34.79 
 
 
847 aa  295  2e-78  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_006369  lpl0663  hypothetical protein  31.31 
 
 
735 aa  290  5.0000000000000004e-77  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp0680  hypothetical protein  31.46 
 
 
735 aa  290  7e-77  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010681  Bphyt_2564  DNA internalization-related competence protein ComEC/Rec2  33.12 
 
 
929 aa  286  1.0000000000000001e-75  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0267783  normal  0.0941772 
 
 
-
 
NC_011071  Smal_1395  DNA internalization-related competence protein ComEC/Rec2  33.85 
 
 
799 aa  285  2.0000000000000002e-75  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.751306  normal 
 
 
-
 
NC_007951  Bxe_A1569  ComEC/Rec2-related protein  33.38 
 
 
801 aa  281  4e-74  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.304315 
 
 
-
 
NC_010622  Bphy_1443  DNA internalization-related competence protein ComEC/Rec2  32.24 
 
 
843 aa  277  4e-73  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1352  DNA internalization-related competence protein ComEC/Rec2  36.99 
 
 
948 aa  264  4e-69  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0141053 
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  30.24 
 
 
841 aa  263  6e-69  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1585  DNA internalization-related competence protein ComEC/Rec2  34.21 
 
 
758 aa  252  2e-65  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.882312  n/a   
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  30.56 
 
 
762 aa  248  4e-64  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  28.47 
 
 
812 aa  242  2e-62  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_008700  Sama_1336  DNA internalization-related competence protein ComEC/Rec2  32.19 
 
 
765 aa  239  1e-61  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.62013 
 
 
-
 
NC_008577  Shewana3_2585  DNA internalization-related competence protein ComEC/Rec2  30.52 
 
 
773 aa  238  3e-61  Shewanella sp. ANA-3  Bacteria  normal  normal  0.13038 
 
 
-
 
NC_010506  Swoo_1818  DNA internalization-related competence protein ComEC/Rec2  29.22 
 
 
765 aa  235  2.0000000000000002e-60  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0856288  normal  0.218544 
 
 
-
 
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  27.79 
 
 
860 aa  233  8.000000000000001e-60  Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  40.59 
 
 
845 aa  226  8e-58  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0899  DNA internalization-related competence protein ComEC/Rec2  27.75 
 
 
798 aa  226  1e-57  Psychromonas ingrahamii 37  Bacteria  normal  0.383263  normal  0.740662 
 
 
-
 
NC_008322  Shewmr7_2493  DNA internalization-related competence protein ComEC/Rec2  30.5 
 
 
773 aa  225  2e-57  Shewanella sp. MR-7  Bacteria  normal  0.105792  normal  0.137051 
 
 
-
 
NC_009438  Sputcn32_1556  DNA internalization-related competence protein ComEC/Rec2  28.75 
 
 
774 aa  222  1.9999999999999999e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2803  DNA internalization-related competence protein ComEC/Rec2  29.83 
 
 
769 aa  219  1e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1667  DNA internalization-related competence protein ComEC/Rec2  28.91 
 
 
795 aa  218  2e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1704  DNA internalization-related competence protein ComEC/Rec2  28.75 
 
 
783 aa  216  9.999999999999999e-55  Shewanella baltica OS195  Bacteria  normal  0.0286912  normal 
 
 
-
 
NC_013889  TK90_1202  DNA internalization-related competence protein ComEC/Rec2  31.4 
 
 
776 aa  214  4.9999999999999996e-54  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.177641 
 
 
-
 
NC_012880  Dd703_2209  hypothetical protein  31.56 
 
 
747 aa  214  5.999999999999999e-54  Dickeya dadantii Ech703  Bacteria  normal  0.785174  n/a   
 
 
-
 
NC_012917  PC1_1768  hypothetical protein  30.12 
 
 
763 aa  213  1e-53  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.44185  n/a   
 
 
-
 
NC_009831  Ssed_2827  DNA internalization-related competence protein ComEC/Rec2  29.41 
 
 
767 aa  213  1e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0829289 
 
 
-
 
NC_009052  Sbal_1682  DNA internalization-related competence protein ComEC/Rec2  28.39 
 
 
783 aa  212  2e-53  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1637  DNA internalization-related competence protein ComEC/Rec2  31.12 
 
 
761 aa  212  2e-53  Shewanella loihica PV-4  Bacteria  normal  0.594703  normal 
 
 
-
 
NC_011663  Sbal223_2675  DNA internalization-related competence protein ComEC/Rec2  28.52 
 
 
783 aa  212  2e-53  Shewanella baltica OS223  Bacteria  normal  0.923098  normal  0.0587505 
 
 
-
 
NC_009832  Spro_1711  hypothetical protein  31.19 
 
 
737 aa  206  9e-52  Serratia proteamaculans 568  Bacteria  normal  0.0805358  normal 
 
 
-
 
NC_013456  VEA_003988  predicted hydrolase of the metallo-beta-lactamase superfamily  28.63 
 
 
752 aa  204  7e-51  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01534  hypothetical protein  28.53 
 
 
752 aa  202  1.9999999999999998e-50  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  28.83 
 
 
763 aa  199  2.0000000000000003e-49  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2310  hypothetical protein  31.14 
 
 
793 aa  199  2.0000000000000003e-49  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0736  putative competence-related protein  30.08 
 
 
768 aa  197  6e-49  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1470  ComEC/rec2 family protein  27.11 
 
 
752 aa  194  4e-48  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2666  hypothetical protein  28.29 
 
 
763 aa  189  1e-46  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2578  hypothetical protein  28.29 
 
 
763 aa  189  1e-46  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0251432  n/a   
 
 
-
 
NC_009674  Bcer98_3051  DNA internalization-related competence protein ComEC/Rec2  27.27 
 
 
780 aa  188  3e-46  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.755952  n/a   
 
 
-
 
NC_010159  YpAngola_A1958  hypothetical protein  28.16 
 
 
763 aa  187  4e-46  Yersinia pestis Angola  Bacteria  hitchhiker  0.0001218  normal  0.195131 
 
 
-
 
NC_009012  Cthe_0606  DNA internalization-related competence protein ComEC/Rec2  25.03 
 
 
778 aa  187  5e-46  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1074  hypothetical protein  27.92 
 
 
754 aa  184  5.0000000000000004e-45  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.361238  normal 
 
 
-
 
NC_009801  EcE24377A_1011  hypothetical protein  28.05 
 
 
754 aa  184  6e-45  Escherichia coli E24377A  Bacteria  hitchhiker  0.00460048  n/a   
 
 
-
 
NC_010498  EcSMS35_2207  hypothetical protein  28.35 
 
 
754 aa  183  8.000000000000001e-45  Escherichia coli SMS-3-5  Bacteria  normal  0.01066  normal  0.239269 
 
 
-
 
NC_013216  Dtox_3303  DNA internalization-related competence protein ComEC/Rec2  30.03 
 
 
789 aa  179  2e-43  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.78547  normal 
 
 
-
 
CP001637  EcDH1_2730  DNA internalization-related competence protein ComEC/Rec2  27.83 
 
 
754 aa  178  3e-43  Escherichia coli DH1  Bacteria  normal  0.170872  n/a   
 
 
-
 
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