| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0933 |
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| Symbol | |
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| ID | 7384436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 956886 |
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| End bp | 959471 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643654248 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_002552411 |
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| Protein GI | 222110147 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.337545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCAGT GGGCGCCCGA AGGGCCACAG CACCAGCAGG GAGGGAGCAC CGCCGCGCGG
GTGGCGACGG CGTCCGCTCG CGTGCCGATC GCTTGCGTGC CTGTGGTGCG GTCCTGGCAT
CTGCCCATGG CGCTGGCTGC GGGGGTGCTG GGCGTGGCGC TGCAACTGCA GCAGCCTTCG
CTGTGGCCCT GGCCGTCCTA TGCGGGGTTG ATGGTTGGCG CGCTGCTGGC GGCCGGGGCG
CTCGCCTGGT GGGCCGGTGT GCGCGGCACG CGCCGCTGGC ACGGCAGCGG CGTGGCGATT
CTGGCCGCGG TGCTGATGTA CGGGCTGTGC GGCATGCGCG CTGCGGTCTT CCTGGAGCAG
TCTCTGGCGC CGGCGCTGGA GGGGCGTGAT CTGCGCGTGA CGGGCGTGGT TGCCGCCATG
CCGCAGCCGC GCGAGACCGG ATTGCGCCTG CGGCTGGAGG TGGAGGCGGC GCAACTGGAC
GGTGCGCCCG TGCGCGTGCC GCCGCTCATC GACCTGACCT GGTATGCCGG CGGGCTGGGT
GATGAGGCAG GCGCGGACAG TCCTCCGCCC GCTGTGCGCG CCGGTGAACG CTGGCGCCTG
ACCGTGCGCC TGAAGGCGCC GCACGGCGGG CGCAATCCGC ACGGCTTCGA TTACGAGCTG
TGGCTGTGGG AGCAAGGGGT GCAGGCCACG GGCTACGTGC GTACCAGCGC GCGGCTGGAT
GCGCTGCACG GCCCGCCTGA GCGGCTGGGC GCCACCTGGC GCCACCCCGT GGAGCAACTG
CGCCAGCGGG TGCGCGACGC CATCGTGCGC ACGCTGGTGG ACCCTGCGCA GGATGCAGCC
CGCCAGCGTG CGGCCGGGGT GGTGGCGGCG CTGGTCACGG GCGACCAGCG CGCCATCGAG
CGGGCAGACT GGGATGTGTT CCGCGCCACG GGCGTGGCCC ACCTCATGAG CATCTCGGGG
CTGCACATCA CGCTGTTTGC CTGGCTTGCG GCCGCACTGC TGGACCGGGC CTGGCGCCGC
TCGCAACGCC TGTGCCTGGC CGTGCCCGCG CCCACGGCGG CGTTGGTGGG CGGTGTGCTG
CTGGCCGCTG CCTATGCGCT CTTCAGTGGA TGGGGCGTGC CCGCGCAGCG CACGGTGTGC
ATGTTGGCCA CGGTGGCGCT GCTGCGCCTG TCGGGGCGGC GCTGGCCCTG GCCGCAGGTG
TGGCTGCTGG CCTGCGCGGT GGTGCTGGCG GTCGATCCGT GGGCGCTACT GCAGCCGGGC
TTCTGGCTGA GCTTTGTGGC CGTGGCCGTG CTGTTTGCTA CCGATTTGGG AGCTGCTAGC
GCTTATCCAG TGGGTATTAC AGGCCGTTTT TATGCATTGC TTCGAGAACA GTGGGTGGTG
ACGCTGGCGC TCACGCCCCT CACGCTATTG CTGTTCGGGC AGGTTGCGCT GGTGGGGCTG
CTGGCCAATT TGGTGGCGAT TCCGTGGACC ACGCTGGTGG TCACGCCGCT GGCGCTGCTG
GGGGTGCTGT GGGCGCCGCT GTGGCAGGCG GCGGCGTGGT GCGTGCAGGC GTTGTCGGTG
TTGCTGCAGT GGCTGGCAGC CTGGCCCTGG GCGCAGGTCG CTCTGCCCAT GGCCCCGCAG
TGGGCCGGCG CGGCAGCCGT GACCGGCGGC GTATTGCTGG CGCTGCGCCT GCCGTGGGGC
GTACGTGCCC TGGGCCTTGC GCTGCTGCTG CCGGCGCTGT GGTGGCAGCC CGCGCGCCCG
CAGCCGGGGC AGTTCGAGCT GCTGGCCGCC GACGTGGGCC AGGGCCAGGC CGTGCTGGTG
CGCACGGCGC GCCATGCGCT GCTGTACGAC GCCGGCCCGC GCTACCACCA GGACAGCGAC
GCGGGCGAGC GCGTGCTGGT GCCCCTGCTG CGCGCGCTGG GCGAACGGCT GGACCTGCTG
GTGTTGAGCC ACCGCGATAC CGACCACACC GGCGGCGCCG CGGCAGTGCT GGCGCAACAG
CCGCAGGCAC GCCTGCTGGG GTCGATTGAG GCCGACCATG CACTGCAGGC CCTGCGGCCC
GCCGAGCCTT GCCTGGCAGG CCAGCACTGG AACTGGGACG GCGTGCTTTT CGAAGTGCTG
CACCCGCCGC GCGATGCGGG CGATGGGCCG GGCGCCCGTG CGCCGACGTC CAATGCCACG
AGCTGTGTGC TGCGCATCGC AGCCGCGGGG ACCAGTGACA AGACCGGCGG TGCGGTGGCC
CTGCTGGTGG GCGACATCGA GCGCGCGCAG GAACAGGCGC TGGTAGATGG CGGTGCAGCG
CTGGCGGCAG ACCTGCTGCT GGTGCCGCAC CATGGCAGCA AGAGCTCGTC CAGCGCGCCA
TTCCTGGATG CCGTGCAGCC GCGCACCGCG CTGGTGCAGG CCGGCTACCG CAACCGCTTC
GGCCACCCCG CGCCCGACGT GGTGGCGCGC TACCGGCAGC GCGGCGTCTT GCTCGTGCAG
TCGCCGCCCT GCGGTGCGGC GCGTTGGGTA TCCGATGCGC CGCTGGCCGT GCACTGTGAA
CGAGAGGCCA CGCGGCGCTA CTGGCACCAC CGCGTGTCCG AGGCGTCACT TTTGCCGCAG
CCGTAG
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| Protein sequence | MDQWAPEGPQ HQQGGSTAAR VATASARVPI ACVPVVRSWH LPMALAAGVL GVALQLQQPS
LWPWPSYAGL MVGALLAAGA LAWWAGVRGT RRWHGSGVAI LAAVLMYGLC GMRAAVFLEQ
SLAPALEGRD LRVTGVVAAM PQPRETGLRL RLEVEAAQLD GAPVRVPPLI DLTWYAGGLG
DEAGADSPPP AVRAGERWRL TVRLKAPHGG RNPHGFDYEL WLWEQGVQAT GYVRTSARLD
ALHGPPERLG ATWRHPVEQL RQRVRDAIVR TLVDPAQDAA RQRAAGVVAA LVTGDQRAIE
RADWDVFRAT GVAHLMSISG LHITLFAWLA AALLDRAWRR SQRLCLAVPA PTAALVGGVL
LAAAYALFSG WGVPAQRTVC MLATVALLRL SGRRWPWPQV WLLACAVVLA VDPWALLQPG
FWLSFVAVAV LFATDLGAAS AYPVGITGRF YALLREQWVV TLALTPLTLL LFGQVALVGL
LANLVAIPWT TLVVTPLALL GVLWAPLWQA AAWCVQALSV LLQWLAAWPW AQVALPMAPQ
WAGAAAVTGG VLLALRLPWG VRALGLALLL PALWWQPARP QPGQFELLAA DVGQGQAVLV
RTARHALLYD AGPRYHQDSD AGERVLVPLL RALGERLDLL VLSHRDTDHT GGAAAVLAQQ
PQARLLGSIE ADHALQALRP AEPCLAGQHW NWDGVLFEVL HPPRDAGDGP GARAPTSNAT
SCVLRIAAAG TSDKTGGAVA LLVGDIERAQ EQALVDGGAA LAADLLLVPH HGSKSSSSAP
FLDAVQPRTA LVQAGYRNRF GHPAPDVVAR YRQRGVLLVQ SPPCGAARWV SDAPLAVHCE
REATRRYWHH RVSEASLLPQ P
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