| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0736 |
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| Symbol | |
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| ID | 6962536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 810858 |
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| End bp | 813164 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643382010 |
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| Product | putative competence-related protein |
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| Protein accession | YP_002265048 |
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| Protein GI | 209809510 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCTAT TAAATGACGT ACGTCTAAAA GGCGTTGTCG TGATTCTTAT TCTTTTGTCG
TCAGCCTATT GGCCGACAAA CATGCCCTTT ACTTTAGTTG TTATATGTTA CTTTGGCTAT
ATAGTTACTT TTCGCATGTC TAAAATGAGA ATCATTCAAG GTGTACTGCT CGGTCTTGTA
ATATCGGCAT TACATATAGA GCGTTACAAA AGTGCAAATA AGGAAATATA TAGCCTAGGG
CATGATATTA CCATCAAAGG TGAAATTCAA AGTCTAATTG CGTTTAAAGA ACCAACTTCT
TCTATTTTAG TTCAAGTGAA AGAAATTAAC GGTAAATCTC TATCTAATAT GAGGACTCAT
TTACTTCGCT TATCAATCCG CGATTATAAA AAGAAGATGC TTAATAGAGA TGAAGCGGTT
TTATTTCAAC AAGGAGATGT GTGGCTTTTT GATATTAGAC TTCGACCTCC AATAGGGCGT
CATAACGAAA CGGGATATAA ACTAGAAAAT TACGCGTTAT CGAAAGGGAT CCACGCTTAC
GGAAAAATCA AGAATGCCAC TTTATTCGAA GAAAATAAAA GTTACCGCTC TCAATGGTTT
TTGCAAGTAT ATGAACAAAC AATCGAAGCA CCGTTTCAAC CGTTGTTACT TGCTTTGTCC
TTTGGATATA AAGGTAATAT ATCCGCTGAT GATTGGACAG TGTTACGTAA TTCTGGATTA
GCTCATTTAC TTGCTATATC TGGTTTACAT ATTGGTTTTG TTTACGGGTT AGGTTGGTGG
TTAGGAAAAC TGGGACGGTA CATTCTTCAA CGACGTTTAA CGCAATGGCT ACCTCTTTTT
AGTGGTTGTG CGTTAGCCAT TTTTTATGGT TGGTTAGCCG GCTTTTCTTT ACCTACGGTT
AGAGCTCTGA TTGCGTGTTT ATTTGTTTCG AGCTTATTAA TGACTCGAAC GGTATGGCCA
AAGCATCAAA TTTTATTGTG GTGCGTGTTA CTTTGTTTAG TTATAAACCC TTTTTCCACA
CTCTCTATGA GTTTCTGGCT TTCTTTTACT GCTGTATTAA CGGTACTTAC GACACTGCAT
ATTTATCAAA TATACATAAA AAATACGGAA TCACCTCGCT TAACTAAAAT ATTACAGATA
CTTGCCGTGC AATTTGGTTT GTTTGTTTTT TTACTTCCGG TGCAAAGTTA TTTTTTTGGA
GGGGTAAGTC TTTTGTCTCC ATTAATCAAC TTGATTGCCG TTCCTTGGGT CAGTATGGTC
ACTGTACCTA TAACTTTGTT TGCTGTTGTT GTCAGCTTTG CTGATAGTGA GTGGCTTAAA
GGATTGTGGC AACTAAGTGA TCTCTCTCTT TTGCCGGTAT GGCATTTAGC TGAATCAGTT
GAAGGGTCAT GGATATCATT ATCAAGTGAC ATAAGTTTAT TTATTATTGG TCTTATTATT
TTCCTAGGAT TAATGGCCTT TTTCTCTTTT AAAATTATAT TGCCAATATT TGCTCTATTG
ATGCTCTTAA TGGCAGTAAC TAAATCAAAA CCTGAATGGC AAGTTGATTT TTTAGATGTT
GGGCATGGAT TAGCTATTCT TATAGAATCA AAGGGTAAGG CCATACTCTA TGATACGGGA
ATGAAGTGGA ATAATGGAAG TATCGCAGAG AGTGTAATTG AACCAATTTT ACACAAAAGA
GGGATTTCAA CCTTAGATGG TTTGATCTTA AGTCATTCTG ATGGTGATCA CTCTGGAGGG
AAAGATTACC TTGTAACTCA TTTTTCACCT AGGTGGGTAA GGCGCAGTGA AGTTGATTCA
AAGGCTTTAC CCTGCATAAA GGGAAGTAGG TGGAAAGAGG GTATGATGGA ATTTGAAGTA
TTGTGGCCGC CAACATTAAC TAAAAGGGCT TACAATCCTC ATTCTTGTGT TGTTAAACTT
ACCGTTGATA AATGGGTGTT TTTATTTACT GGCGATATTG ATGCAATTTC AGAAATGTTG
ATCTTAAATC AAAATGAATT TAATGAGGTA GATGTTTTTC TTGTTCCTCA CCACGGTTCT
AATTCATCGT CGACTGAGCG CTGGGTAAAA GAGATGGGTG GAAAGATTGC AGTGGTCTCT
AGTGGCTTGT TTACTCCTTG GGATCTGCCG AGTAAAAAGA TTAAAGAAAG ACATGAAGTA
AAGAATATTG ATTGGTTAGA TACTGCACAA CTAGGACAGA TACGAATAAC GGCTTCTGAT
GAAAAACTAC TCATTAAAGG TTATTCAACC GTTAATAGCC ACGTTTGGTA CAGAAAGCTA
TTTGGCGATA ACTTAAATAC AGAGTAG
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| Protein sequence | MLLLNDVRLK GVVVILILLS SAYWPTNMPF TLVVICYFGY IVTFRMSKMR IIQGVLLGLV
ISALHIERYK SANKEIYSLG HDITIKGEIQ SLIAFKEPTS SILVQVKEIN GKSLSNMRTH
LLRLSIRDYK KKMLNRDEAV LFQQGDVWLF DIRLRPPIGR HNETGYKLEN YALSKGIHAY
GKIKNATLFE ENKSYRSQWF LQVYEQTIEA PFQPLLLALS FGYKGNISAD DWTVLRNSGL
AHLLAISGLH IGFVYGLGWW LGKLGRYILQ RRLTQWLPLF SGCALAIFYG WLAGFSLPTV
RALIACLFVS SLLMTRTVWP KHQILLWCVL LCLVINPFST LSMSFWLSFT AVLTVLTTLH
IYQIYIKNTE SPRLTKILQI LAVQFGLFVF LLPVQSYFFG GVSLLSPLIN LIAVPWVSMV
TVPITLFAVV VSFADSEWLK GLWQLSDLSL LPVWHLAESV EGSWISLSSD ISLFIIGLII
FLGLMAFFSF KIILPIFALL MLLMAVTKSK PEWQVDFLDV GHGLAILIES KGKAILYDTG
MKWNNGSIAE SVIEPILHKR GISTLDGLIL SHSDGDHSGG KDYLVTHFSP RWVRRSEVDS
KALPCIKGSR WKEGMMEFEV LWPPTLTKRA YNPHSCVVKL TVDKWVFLFT GDIDAISEML
ILNQNEFNEV DVFLVPHHGS NSSSTERWVK EMGGKIAVVS SGLFTPWDLP SKKIKERHEV
KNIDWLDTAQ LGQIRITASD EKLLIKGYST VNSHVWYRKL FGDNLNTE
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