Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0736 |
Symbol | |
ID | 6962536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 810858 |
End bp | 813164 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643382010 |
Product | putative competence-related protein |
Protein accession | YP_002265048 |
Protein GI | 209809510 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCTAT TAAATGACGT ACGTCTAAAA GGCGTTGTCG TGATTCTTAT TCTTTTGTCG TCAGCCTATT GGCCGACAAA CATGCCCTTT ACTTTAGTTG TTATATGTTA CTTTGGCTAT ATAGTTACTT TTCGCATGTC TAAAATGAGA ATCATTCAAG GTGTACTGCT CGGTCTTGTA ATATCGGCAT TACATATAGA GCGTTACAAA AGTGCAAATA AGGAAATATA TAGCCTAGGG CATGATATTA CCATCAAAGG TGAAATTCAA AGTCTAATTG CGTTTAAAGA ACCAACTTCT TCTATTTTAG TTCAAGTGAA AGAAATTAAC GGTAAATCTC TATCTAATAT GAGGACTCAT TTACTTCGCT TATCAATCCG CGATTATAAA AAGAAGATGC TTAATAGAGA TGAAGCGGTT TTATTTCAAC AAGGAGATGT GTGGCTTTTT GATATTAGAC TTCGACCTCC AATAGGGCGT CATAACGAAA CGGGATATAA ACTAGAAAAT TACGCGTTAT CGAAAGGGAT CCACGCTTAC GGAAAAATCA AGAATGCCAC TTTATTCGAA GAAAATAAAA GTTACCGCTC TCAATGGTTT TTGCAAGTAT ATGAACAAAC AATCGAAGCA CCGTTTCAAC CGTTGTTACT TGCTTTGTCC TTTGGATATA AAGGTAATAT ATCCGCTGAT GATTGGACAG TGTTACGTAA TTCTGGATTA GCTCATTTAC TTGCTATATC TGGTTTACAT ATTGGTTTTG TTTACGGGTT AGGTTGGTGG TTAGGAAAAC TGGGACGGTA CATTCTTCAA CGACGTTTAA CGCAATGGCT ACCTCTTTTT AGTGGTTGTG CGTTAGCCAT TTTTTATGGT TGGTTAGCCG GCTTTTCTTT ACCTACGGTT AGAGCTCTGA TTGCGTGTTT ATTTGTTTCG AGCTTATTAA TGACTCGAAC GGTATGGCCA AAGCATCAAA TTTTATTGTG GTGCGTGTTA CTTTGTTTAG TTATAAACCC TTTTTCCACA CTCTCTATGA GTTTCTGGCT TTCTTTTACT GCTGTATTAA CGGTACTTAC GACACTGCAT ATTTATCAAA TATACATAAA AAATACGGAA TCACCTCGCT TAACTAAAAT ATTACAGATA CTTGCCGTGC AATTTGGTTT GTTTGTTTTT TTACTTCCGG TGCAAAGTTA TTTTTTTGGA GGGGTAAGTC TTTTGTCTCC ATTAATCAAC TTGATTGCCG TTCCTTGGGT CAGTATGGTC ACTGTACCTA TAACTTTGTT TGCTGTTGTT GTCAGCTTTG CTGATAGTGA GTGGCTTAAA GGATTGTGGC AACTAAGTGA TCTCTCTCTT TTGCCGGTAT GGCATTTAGC TGAATCAGTT GAAGGGTCAT GGATATCATT ATCAAGTGAC ATAAGTTTAT TTATTATTGG TCTTATTATT TTCCTAGGAT TAATGGCCTT TTTCTCTTTT AAAATTATAT TGCCAATATT TGCTCTATTG ATGCTCTTAA TGGCAGTAAC TAAATCAAAA CCTGAATGGC AAGTTGATTT TTTAGATGTT GGGCATGGAT TAGCTATTCT TATAGAATCA AAGGGTAAGG CCATACTCTA TGATACGGGA ATGAAGTGGA ATAATGGAAG TATCGCAGAG AGTGTAATTG AACCAATTTT ACACAAAAGA GGGATTTCAA CCTTAGATGG TTTGATCTTA AGTCATTCTG ATGGTGATCA CTCTGGAGGG AAAGATTACC TTGTAACTCA TTTTTCACCT AGGTGGGTAA GGCGCAGTGA AGTTGATTCA AAGGCTTTAC CCTGCATAAA GGGAAGTAGG TGGAAAGAGG GTATGATGGA ATTTGAAGTA TTGTGGCCGC CAACATTAAC TAAAAGGGCT TACAATCCTC ATTCTTGTGT TGTTAAACTT ACCGTTGATA AATGGGTGTT TTTATTTACT GGCGATATTG ATGCAATTTC AGAAATGTTG ATCTTAAATC AAAATGAATT TAATGAGGTA GATGTTTTTC TTGTTCCTCA CCACGGTTCT AATTCATCGT CGACTGAGCG CTGGGTAAAA GAGATGGGTG GAAAGATTGC AGTGGTCTCT AGTGGCTTGT TTACTCCTTG GGATCTGCCG AGTAAAAAGA TTAAAGAAAG ACATGAAGTA AAGAATATTG ATTGGTTAGA TACTGCACAA CTAGGACAGA TACGAATAAC GGCTTCTGAT GAAAAACTAC TCATTAAAGG TTATTCAACC GTTAATAGCC ACGTTTGGTA CAGAAAGCTA TTTGGCGATA ACTTAAATAC AGAGTAG
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Protein sequence | MLLLNDVRLK GVVVILILLS SAYWPTNMPF TLVVICYFGY IVTFRMSKMR IIQGVLLGLV ISALHIERYK SANKEIYSLG HDITIKGEIQ SLIAFKEPTS SILVQVKEIN GKSLSNMRTH LLRLSIRDYK KKMLNRDEAV LFQQGDVWLF DIRLRPPIGR HNETGYKLEN YALSKGIHAY GKIKNATLFE ENKSYRSQWF LQVYEQTIEA PFQPLLLALS FGYKGNISAD DWTVLRNSGL AHLLAISGLH IGFVYGLGWW LGKLGRYILQ RRLTQWLPLF SGCALAIFYG WLAGFSLPTV RALIACLFVS SLLMTRTVWP KHQILLWCVL LCLVINPFST LSMSFWLSFT AVLTVLTTLH IYQIYIKNTE SPRLTKILQI LAVQFGLFVF LLPVQSYFFG GVSLLSPLIN LIAVPWVSMV TVPITLFAVV VSFADSEWLK GLWQLSDLSL LPVWHLAESV EGSWISLSSD ISLFIIGLII FLGLMAFFSF KIILPIFALL MLLMAVTKSK PEWQVDFLDV GHGLAILIES KGKAILYDTG MKWNNGSIAE SVIEPILHKR GISTLDGLIL SHSDGDHSGG KDYLVTHFSP RWVRRSEVDS KALPCIKGSR WKEGMMEFEV LWPPTLTKRA YNPHSCVVKL TVDKWVFLFT GDIDAISEML ILNQNEFNEV DVFLVPHHGS NSSSTERWVK EMGGKIAVVS SGLFTPWDLP SKKIKERHEV KNIDWLDTAQ LGQIRITASD EKLLIKGYST VNSHVWYRKL FGDNLNTE
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