Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2585 |
Symbol | |
ID | 4479247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3089277 |
End bp | 3091598 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639727188 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_870218 |
Protein GI | 117921026 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.13038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGAT TCATTTTTGG CTTTAGTGCC ACCTTATTAT CAGCGATGTT GTGGCCCTCG CTGCTGCCAA TTAATTCTTT ACCCTACCTT TGCCTTGGGG CACTCATCTT ATTCAAAAAA GCGCCGAGTT TGTCTGGCAT ACTCTTCGCG ATGTGTTGGC TTACAGGGTT TTGCTTAGTC TTATCTCGGC AGGATCTTCC TTTATCGCAA CAGCCAATTC AAGTGAGGGC CGAAATCATA TCACTAGTTA GTCAAAACAG CGACTGGGTT AGCTTCGATA TTATTGTCGA TAAACCAAAT TTAATCTTTT GGCCAAGGGC GAAGTTGCGA CTCACTTGGC AATCTCCCGA AGCGGTGCAA GTGGGGCAAG TTTGGTCATT TACGCTGATG CCTAAAACTA TCTCGAGCGT GTTAAATCAA GGTGGCTACA ACGAACAAAA GCAATTGATT AGTCAGCATA TTGTTGGCAA GGGCAGGGTA CTACATGCAA CGTTAGAAAC ATCGCATTTT TCATTAAGAA ATCATCTGAT TAGCCAATTG TCCCCTAAGC TGCCGACATT CGAGCAGGGG GATATTTTGC TCGCGCTGAT TTTAGGCGAT AAGCAACTTA TACCCGCCAG TAAGTGGCAG GCATTAAGGC AAACGGGAAC CGGGCATTTA GTGGCGATAT CTGGGCTGCA TTTATCTGTG ATCACCGCCT GGGTTTATGT ATGCACGCTG TTTCTATTAA GCCGCTTCGC GGCGCATCCG AGCAGGCGTA ATCTAGTGAT TGCGCTATTG CTTGCCGGTG GTTGTGCTTT ATTTTATAGC TATTTAGCGG GATTTGCCGT TTCGACCCAA CGCGCGTTAG TGATGATTTT ATTGATCATG CTGCTGAGTT TATTAAGGCG CTATTCGAGT GCGTGGGACC GTTTACTGTT TGCACTCTTT ATTGTGCTTT TGCTCGATCC GCTTGCCTGT TTGAGTGCAG GTTTTTGGCT GTCGTTTTGC GCCTTGGCGA TTATTTTATA TACCTTGGAA AGCGCGCCGC GTATTCAGCC CGTTGAAGGT AACGCCACCT TTAGGGCAAA AGCGAGAGGG AGACTCGCGC AATTTTGGTC AATTCAATGG CGTTTAAGTT TGGTGTTAGG GCTGGTACAG GCGGTGTTTT TCGGCGGCCT AAGCGTACAC AGTCTGTGGA TGAATATGCT GGTGGTGCCT TGGTTTAGCT TAATCGTTAT CCCCTTGTCT ATGCTGGCGT TTATCCTCTG GTGGGTAGGC ACTCTTTTGG GGCAAGCATG GTTTGCGTTG TTCCATCTGG CTGATTTAAC ACTGTTACCC TATGGCAAGT TATTGGAACT TAGTGGTGAT TTACCCGCCC ATTGGCATTC GGTCTCTGAG ACCTTGCTCG GGGCCAGTCT GTGCGCACTG TTGGCCTTGA TACTGTGGCG TTACCTTCCG CATCATAGTC GGTATGGGCT CTGGCATTTA CCTTTAGCCT TGCTGTTTAT TCCGTTCATA TTAGTGATTT TTCCACGTGT GACTGAGTCC TCTTCCCCTC AGTGGACACT GCATCTACTC GATGTGGGGC AGGGATTAGC CGTGGTGATT GAACAGGATA AACGCGCACT TATCTATGAT ACGGGCGCCG CCTTTGGTGA AGATTTTAGC TATAGCGAAC GGGTGGTCAT TCCGTTTCTT AACAGCAAAG GCTTAGCTCA GGTGGATTAT ATTGTCGTGA GTCATAGGGA TAACGACCAT GCAGGTGGTG CCGAAGTACT GGCTAAAGCC TATCCAAGGG CAAACTGGAT AACCGATGTG GCTCATTTGG CTGGTATGCC TTGTGTGCCG CAGCAAATTC AGTGGCAGCA ATTAACGTTA AACTTTATTT CGCCGCAGAC GGCCAAGGGA GGGAACAACG CCTCCTGTGT GCTGCGTATC GATGATGGCG CGCACAGTTT GTTACTCAGT GGTGATATTG AAAAGGAAAC CGAAGCGGTA TTGATTGAAC AAGCGCTCAA AGGTGCCGAG CTTAAAAGCC AAGTGCTCAT TGCGCCGCAC CATGGCAGCC GCACCTCATC AACCCCTGCC TTTATCGATG CTGTCGCTCC TGAGTTAGTG TTGTTTCCTT CAGGTCTCAA TAACCGTTAT GGTTTCCCCA AGCCCGATGT GGTTGCGCGC TATCAAGCGC GGAATATTCA GTATTTAACG ACGGGGCGAG AAGGGCAAAT CAGCGTTTCT TTTAATGCTG GACGGCTTGA GGTGAAGACC TATCGGCGTG ATTTGGCGCC ATTTTGGTAT AACCGCTTGT TTAGATTTGG TGACTTGATT AATCCAGAGT AG
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Protein sequence | MNGFIFGFSA TLLSAMLWPS LLPINSLPYL CLGALILFKK APSLSGILFA MCWLTGFCLV LSRQDLPLSQ QPIQVRAEII SLVSQNSDWV SFDIIVDKPN LIFWPRAKLR LTWQSPEAVQ VGQVWSFTLM PKTISSVLNQ GGYNEQKQLI SQHIVGKGRV LHATLETSHF SLRNHLISQL SPKLPTFEQG DILLALILGD KQLIPASKWQ ALRQTGTGHL VAISGLHLSV ITAWVYVCTL FLLSRFAAHP SRRNLVIALL LAGGCALFYS YLAGFAVSTQ RALVMILLIM LLSLLRRYSS AWDRLLFALF IVLLLDPLAC LSAGFWLSFC ALAIILYTLE SAPRIQPVEG NATFRAKARG RLAQFWSIQW RLSLVLGLVQ AVFFGGLSVH SLWMNMLVVP WFSLIVIPLS MLAFILWWVG TLLGQAWFAL FHLADLTLLP YGKLLELSGD LPAHWHSVSE TLLGASLCAL LALILWRYLP HHSRYGLWHL PLALLFIPFI LVIFPRVTES SSPQWTLHLL DVGQGLAVVI EQDKRALIYD TGAAFGEDFS YSERVVIPFL NSKGLAQVDY IVVSHRDNDH AGGAEVLAKA YPRANWITDV AHLAGMPCVP QQIQWQQLTL NFISPQTAKG GNNASCVLRI DDGAHSLLLS GDIEKETEAV LIEQALKGAE LKSQVLIAPH HGSRTSSTPA FIDAVAPELV LFPSGLNNRY GFPKPDVVAR YQARNIQYLT TGREGQISVS FNAGRLEVKT YRRDLAPFWY NRLFRFGDLI NPE
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