Gene VIBHAR_01534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01534 
Symbol 
ID5553609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1536398 
End bp1538656 
Gene Length2259 bp 
Protein Length752 aa 
Translation table11 
GC content45% 
IMG OID640907025 
Producthypothetical protein 
Protein accessionYP_001444731 
Protein GI156973824 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTCT TAGAAAAAAG TTTGACCTTG GCGTTATTTG TAGCGAGCGT TATATCGTCT 
GCGTGGTGGC CGACGATGCC TGATTGGCGA TGGTTGCTGC TGGGAATAAT TGCCACTGGC
TCGATTATCA AATTACGTCG TGGCTTATTG AGCATAGGCG TAATTTGGGG CTTTATGGTT
GTCATTATCC ACGGCAATGT TATGGAGCAT CAAAGACAAG CCCTGTTTCG AGTAGGGGTG
AATATTACCA TAAATGGCAA AGTTGACAGC CCTTTTACGC AAATAAGTCA CGGATATGAA
GGAATTGCGC AGATCAATCA GGTGAATTCT CAAAACCTGT TACCTTTTCT TAAACCGAAA
ATCCGATTGA TAACCGCTTT CCCACTGCCC GTTAACAGTG AGTTCACTAC TCAGGTGACG
ATCAAACCGA TTCTGGGTTT GAAGAATGAG GCGGGGTTTG ATGCGGAAAA GCAAGCGATA
GGTAAGGGTA TTACCGCTAG AGCTGTCACA CCTGATGACG CGAAATGGTT GATTCGTACA
CACTCTTCAT TTCGACAGCA AATCATTACG GCCGTTGATA CTCATATTGC TGAACTTGAC
CATTTCCCTT TAATCAGTGC ATTAGCGTTT AGCGACCGCT CCCTGCTTGC TAAACAGGAT
TGGCAGTCTC TGCGAGATAG CGGGCTGCTG CATTTGGTCT CAATCTCTGG TTTGCATATT
GGAATGGCGT TTGCGTTTGG CATGAGTTTG GGCTTTGTTA TTCGGCTTCT ATTCCCCAAA
TTTGTTCACC TTCCTTCCGC TGTCGGTTTA TTGGCAGCGC TCGTTTATGC GTGGTTGGCC
GATTTTTCTT TACCTACAGC CCGTGCTTTC TCGGTTTGTG TCATTTATCT CGTACTTAAA
GCGGCGTTGG TTCATTGGAG CCCTTGGCGA GTGTTATTGC TCGCAGTCTC GATACAGCTT
TTCATCGAAC CTTTTGCTTC ATTCACGATG AGCTTCTGGT TGTCTTATCT GTCCGTGGTT
GCTGTGCTTT TAGCCGTGAA TGTGGTTCAA CAGCGACGCG GCAATTGGCA AACGAAGCTG
AGTTCACTAC TAAAAATACA GTTAGTGCTT ACTTTGCTTA TCGTGCCAAT CAGCGGTGCG
TTTTTCTCTG GAACAAGTTT GGTATCCATC GCTTATAACC TAGTTTTCAT TCCTTGGTTT
GGTTTTTTGG TCGTTCCTTT GATGTTCCTA GCGCTGATTG TAACCCCAAT TTCTTTTCAG
TTGGCTGGTA TGCTTTGGCA ACTGGTGGAT TGGGTGTTGT TGTCACTGAC ATGGTCATTA
CAGTTTGCGG TCGGGAGTTG GCATTTTGTA AGTTTGCCTT TGACCTTAAC GATACTCGCA
GTTGCCATCT GTGGATTATT GAGACGTTTT TTGAATCGGG GCTCGTTCGT TACGTTAGTC
ATTCTAGTAA CGGGTGTCGC CCTATTTTAT GAGCGTACAA CGAATTCTTG GCGAGTGGAC
GTGTTAGATG TAGGGCACGG CCTTGCGGTA TTAATTGAGA AGCATGGAAA GGTGACGCTT
TACGACACAG GCAAAGCTTG GAACTCAGGG AGCATCGCTC AGCAAGCTAT CTCTCCTATA
TTACATCGCA GAGGTTTTGG CACCATTGAT ATGTTCATTA TCAGTCATGC TGATTCGGAT
CATGCAGGAG GTAGGCAGTA TATAGAGCAG CACTTTTCGC CAGCGCAGAA ATTCAGCAGT
CAAAACTACG CTAACTACCA ATCTTGTATT GCGGGTGAAC GCTGGTATTG GCAGGCGCTT
TATTTTGAAG TCCTATGGCC ACCTAAGCAG GTAAACCGTG CTTATAATCC TCATTCGTGT
GTTGTTCGAG TTGTGGATAA GGAATCGGAT TTTAAATTGC TTTTGACTGG CGATATTGAA
GCCGTCAGTG AGTGGATACT TATGCGTGAA CCCAACAAGC TAGAGAGTGA TGTTATGTTG
GTTCCTCATC ATGGTAGCAA GAGTTCTTCG AATCCAAAAT TTGTTCAAAC TGTCTCTCCA
ACCTTGGCGA TAGCCTCGTT AGCAAAAAGT AATCAGTGGG GCATGCCTGC TGAAAATGTT
TTATCGGCTT ATCAGGCAGC AAATGCCCAC TGGCTGGATA CGGGAAATCA TGGGCAGGTA
TCGGTGTTTA TTGAGCGAGA CAATTGGTAC TTTGAAACTA AACGTAGTGA GACATTTGAG
CCTTGGTATA GGCAGATGCT GCGTAAGGGA GTAGAATAA
 
Protein sequence
MTLLEKSLTL ALFVASVISS AWWPTMPDWR WLLLGIIATG SIIKLRRGLL SIGVIWGFMV 
VIIHGNVMEH QRQALFRVGV NITINGKVDS PFTQISHGYE GIAQINQVNS QNLLPFLKPK
IRLITAFPLP VNSEFTTQVT IKPILGLKNE AGFDAEKQAI GKGITARAVT PDDAKWLIRT
HSSFRQQIIT AVDTHIAELD HFPLISALAF SDRSLLAKQD WQSLRDSGLL HLVSISGLHI
GMAFAFGMSL GFVIRLLFPK FVHLPSAVGL LAALVYAWLA DFSLPTARAF SVCVIYLVLK
AALVHWSPWR VLLLAVSIQL FIEPFASFTM SFWLSYLSVV AVLLAVNVVQ QRRGNWQTKL
SSLLKIQLVL TLLIVPISGA FFSGTSLVSI AYNLVFIPWF GFLVVPLMFL ALIVTPISFQ
LAGMLWQLVD WVLLSLTWSL QFAVGSWHFV SLPLTLTILA VAICGLLRRF LNRGSFVTLV
ILVTGVALFY ERTTNSWRVD VLDVGHGLAV LIEKHGKVTL YDTGKAWNSG SIAQQAISPI
LHRRGFGTID MFIISHADSD HAGGRQYIEQ HFSPAQKFSS QNYANYQSCI AGERWYWQAL
YFEVLWPPKQ VNRAYNPHSC VVRVVDKESD FKLLLTGDIE AVSEWILMRE PNKLESDVML
VPHHGSKSSS NPKFVQTVSP TLAIASLAKS NQWGMPAENV LSAYQAANAH WLDTGNHGQV
SVFIERDNWY FETKRSETFE PWYRQMLRKG VE