| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1336 |
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| Symbol | |
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| ID | 4603588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1627401 |
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| End bp | 1629698 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780686 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_927213 |
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| Protein GI | 119774473 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.62013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAACC CATTTCTGCT GGGCTTTTGT GCCCTTGTCA TCTCATCGCT GCTCTGGCCA
GTGCTGCCGC CCTGGCCGGC CTGCCTGCTT TTGCTTGTGG CATTGGGGTG TTACCGCAAG
TTGCCTGTGC TCAGTGGAGC CCTGACTGCC GTGGCGTGGG TTGCTGTGTA CACCCATATG
CTGTTCGATT ACAGCCACCT GCAACAAGCC GGTGATTCCT GGGTGCGTGG CGAGATAATA
GCACCTGTGT CTGACAGCGG CGACTGGCAG AGTATAGATA TACGTCTTGT TAAACCAAAA
TTAATCTGGC CTGTTGAGGG CAATATCAGG CTCAACTGGC GAACAACTGA CCAAATTCGT
CCCGGGGAGC AGTGGGAATT TCGTCTTGCA CCCCGTTCCA TCACCTCGCC CCTCAACGAA
GGCGCCTTCA ACGGTCAGCG TTACCTGCTA TCACGCCATG TGGGTATCAA GGCAAGAGTG
CTGGAAGCAA GAAAAGTATC CGAGGCGTCA GGGCTTCGCG GGCTATTACT GGAGCACATT
GGCCATGCCA TATCGGAGAA ACCCCGGCAG GCGCTGCTGT ACCCACTGCT GACGGGGGAA
CAGCAGGGCA TAGATGCGCA GACCTGGCAG CGGCTCAGGC AAACCGGCAC CGGGCACCTG
ATGGCCATCT CCGGGTTGCA TATGTCGGTG CTCGGAGCCT GGCTGTTGCT GCTGTGCCGC
GCGCTGTTGA CCTCGTTTGC GCCGCGCCAG GACAGGCGTA ATTTGGTGAT TGCCATGATA
GTCGCCACTG TGGGGTGTCT GCTCTATGGT CTGCTGGCGG GCATGGGCAT TCCTACCCGC
CGGGCCTTTA TCATGCTGGC ATTGGTGGTG CTGCTGACCC TCAGTCGCCG TTTCGCCTCG
CCCTGGGAGC GTTTGTTGTA CGCCCTTGCC GCTGTGTTGT TTCTCGATCC TTTGTCGCCA
CTGTCTGCCG GATTTTGGCT GTCTTTTGGC GCCATCGTGA TTATGTTACT GCTATTGGAC
CGGCCGCCCG CCCACCTTGA GGGTGTCCCC GGTCGATTAA AGCACTACCT GATGTCGCTG
GTGACGCTGC AGTTGGCACT CAGTATCGGA CTGGGAGTAT TGCAGCTGGT GCTCTTTGGC
GGTGTCAGTG TCCATAGCCT GTGGATTAAT CTGCTGATGG TGCCCTGGTT TTCGCTGGTG
GCCATTCCCC TGGCGTTGGC AGGGCTTGTG TTTTTTGTTC TCTTGCTGCC TTTTGGGATA
TTGGCCGACT GGGCGTTTAC TCCCGCCCTC ATGGCATTGA TACCGCTGGA TGGGCTTCTT
ACGTTCAGTG ACCACTTACC CGGCGCCTGG ATAAGCGTGC CGGCACAGTT GATTGCGCCC
CTGTGTTTTG CCATTGCAGG CGCTGTTTTA TTGTTTTTGC CTTTGGCGCG GGGTGTTAAG
TGGGTGAGCG CCTCCTTACT GTTGCCGCTA CTGATAACTC TGAGTGTGAA AGGCGGGCCC
CAATGGCAGA TGCATTTACT GGATGTAGGG CAGGGGCTGG CCGTCGTGGT TTTCAGCCGG
GATCAAACAC TGGTGTACGA CACCGGATTG GCCTTTGGTG ACACCTTCTC CCATGGTGAG
CGAACCCTGG TGCCATTTTT GCGGGCCAAG GGACGTAATC ACATCGATGT GTTGGTCATC
AGCCATGAGG ATAAAGACCA TGCCGGTGGC GCCGCCGCGC TGGCCAGAGC AATGCCAGTC
CACTTACTCA TCAGCGATAC CCGGGCTGCA AGGGATACAC TGGCGATGGA ACATGCGCCT
TGCCGCCCTC AGGCATTCGC CCTTGGCAAT CTGTGGGTAG AGGTCCTGTC GCCCGCAGAC
TCACCGGCTG GAAGAGTAGA CAATAATGCT TCCTGTGTGG TGACAGTGGG CGATGGTCAT
TCGCGGCTGC TGTTGCCCGG CGACATTGAA GCCGAAGGGG AGACGCGGCT CCTTGGCAGT
GGCGAGGCGT TGAACGCCAA TGTCTTAGTG GCACCCCACC ATGGCAGCCT GACGTCATCG
ACTCCGGCCT TTGTCGCGGG CGTAGCACCG GCCATCACCC TCTTTGCTGC CGGCGCCAAC
AACAGATACG GTTTTCCTAA AGACGCCGTG GTGCAGCGAT ACCTGGCCCA GGGCAGTCAA
ACGTTTACTG CGGCGGATAC CGGCCAGATA AGCCTGTACC TTGATGATGA AATCACAGTG
AAAACCTATC GGGGTTCGCT GGCCCCTTTT TGGTATAACC GGGTCTTTGG AGTTGGTGGC
AGGCCGATTA CAGAGTAG
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| Protein sequence | MKNPFLLGFC ALVISSLLWP VLPPWPACLL LLVALGCYRK LPVLSGALTA VAWVAVYTHM
LFDYSHLQQA GDSWVRGEII APVSDSGDWQ SIDIRLVKPK LIWPVEGNIR LNWRTTDQIR
PGEQWEFRLA PRSITSPLNE GAFNGQRYLL SRHVGIKARV LEARKVSEAS GLRGLLLEHI
GHAISEKPRQ ALLYPLLTGE QQGIDAQTWQ RLRQTGTGHL MAISGLHMSV LGAWLLLLCR
ALLTSFAPRQ DRRNLVIAMI VATVGCLLYG LLAGMGIPTR RAFIMLALVV LLTLSRRFAS
PWERLLYALA AVLFLDPLSP LSAGFWLSFG AIVIMLLLLD RPPAHLEGVP GRLKHYLMSL
VTLQLALSIG LGVLQLVLFG GVSVHSLWIN LLMVPWFSLV AIPLALAGLV FFVLLLPFGI
LADWAFTPAL MALIPLDGLL TFSDHLPGAW ISVPAQLIAP LCFAIAGAVL LFLPLARGVK
WVSASLLLPL LITLSVKGGP QWQMHLLDVG QGLAVVVFSR DQTLVYDTGL AFGDTFSHGE
RTLVPFLRAK GRNHIDVLVI SHEDKDHAGG AAALARAMPV HLLISDTRAA RDTLAMEHAP
CRPQAFALGN LWVEVLSPAD SPAGRVDNNA SCVVTVGDGH SRLLLPGDIE AEGETRLLGS
GEALNANVLV APHHGSLTSS TPAFVAGVAP AITLFAAGAN NRYGFPKDAV VQRYLAQGSQ
TFTAADTGQI SLYLDDEITV KTYRGSLAPF WYNRVFGVGG RPITE
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