Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003988 |
Symbol | |
ID | 8557724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2633186 |
End bp | 2635444 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646407086 |
Product | predicted hydrolase of the metallo-beta-lactamase superfamily |
Protein accession | YP_003286613 |
Protein GI | 262394759 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTCT CAGAAAAAAG TTGGACCTTG GCGTTATTTG TAGCGAGCGT AATTTCGTCA GCTTGGTGGC CGACAATACC AGATTGGCGT TGGCTGCTGC TGGGAATAAT AACCACTGGC TCAATAATCA AATTACGTCG TGGCTTAATT AGCATAGGCG CAATTGCGGG CTTTATGGTT GTCATCGTCC ACGGCAATGT ATTGGAGTCT CAGAGACAAG CCCTTTTTCA AGCAGGGGAG AATATTACCA TAATTGGTAA AGTTGACAGC CCTTTTACGC AAATAAGTCA CGGATATGAA GGCATTGTGG CTCTAAAAAA GGTAAATTCT CAAACTCTGT TACCTTTTCT TAAACCTAAA ATCCGTCTTA TTACGCCTTT TCCACTCGAT GTTAACAGTG AGTTTACGAC ATCCGTCTCG TTAAAGCCGA TTACAGGCCT ACGCAACGAA GCTGGTTTTG ACGCTGAAAA GCACGCAATG GGTAAAAGTA TTATCGCACG CGGTGTTGTT AACAAGGATG TTACCTGGAT TATTCGTTCT ACTACATCTT TGCGCCAAGC CATTATCGCT GATGTTTCGG AGGATGTGTC CTCCCTTCAT CATTTCTCGT TAATAAATGC GTTAGTTTTT GCCGATCGCT CTTGGTTATC TAAGGAGGAT TGGCAAGCAC TCAGAGACAG TGGTTTACTG CACTTGGTCT CGATTTCGGG CTTACATATT GGTATGGCGT TTACTTTTGG GGTAGTGGTG GGCGGTGCCA TTCGTTATGC GTTACCTCAA TACCAGCTAT TGCCTAGCTT ATGTGGGCTG ATGTTTGCCG TTGCCTATGC TTGGTTAGCG GACTTCTCAT TACCTACTAC CCGCGCGGTG TCTGTATGTG TTATTTACGT CGTTCTCAAA TATACCTTAG TGCACTGGGC TTCCTGGCGG GTACTTTTGC TCGCGGTAGC GCTACAACTG CTTGTTCAAC CTTTTGCATC GTATAGCATG AGTTTTTGGT TATCGTATTT GTCAGTTTGC GCAGTGCTGT TTGCAATCAA TTTGGTTCGG CATCAAAACG GGGGCTGGAA GGCGAAGTTA AAAGTGTTAT TGCTTACTCA ATTGATGTTG AGTGCGTTAA TCGTGCCTAT TAGTGGCTAT TACTTTTCTG GTTTCAGTTT GTCATCAATT GCATACAACT TGGCGTTTAT TCCTTGGTTC GGATTTATCG TTGTGCCTTT GATGTTTCTG GCCCTGTTCT CATCTTTATT TCTTGAAATG ATAGCAAAGC CTCTGTGGCA GTTGGTGGAC TGGTCATTGC AGCCATTGAG CACGTCAATT CAGTACGCGA TAGGCTCCTG GCAAGCCATT AGTATAGAAA TGACAGGGTT GATTCTGGCG GGAATTATTT GCTTGGTGTT TCAACGATTC ATGTTTCAGT ACGCGTGGTG TTTGTTACTT GGCATTGTAA TTAGTATTAA GCTCACATCG GAATATGATC AGCAACATTG GCGCATTGAT GTACTAGATG TGGGCCATGG CCTTGCGGTG ATTGTAGAAA AAGACGATAA AGTGTTGCTC TATGATACAG GTAAAGCATG GCAAAATGGC AGTATTGCGG AGCAGGTCGT CACTCCGGTC TTGCATCAAC GAGGTTATGA AAGCATCGAT ACGATGATCC TCAGCCACTC CGACAATGAC CATGCAGGAG GACGCTTGTT CATTGAAGAT TCCTTTTCGC CACAGCGCAA ACTCAGTAGC CAAAACTTTA TCGGATATGA GTCTTGTACT CGCGGCGATC ATTGGAAATG GCAAGGGTTA AATATAGAAG TACTTTGGCC TCCTGCTCTT GTTCAACGTG CATATAATCC GCACTCTTGT GTACTACGCC TTACCGACCC TATTTCTACG TTCAGTATGC TTTTTACTGG TGATATTGAG ACCATTAGCG AGTGGATCTT GCTCAGGGAG CCTGAAAAGT TAAAAAGTGA TGTGATGTTG GTCCCTCATC ATGGTAGTAA AAGTTCGTCG AATCCTCGCT TTATTGAAGC GGTAAACCCG AGTGTGGCCG TTGCTTCTTT GGCAAAAAAT AATCAATGGG GAATGCCGGC AGAACATGTT GTTACAGCAT ATCGCAAGCT TGACATTACT TGGCTTGATA CTGGGGAATA TGGTCAGGTA AGCTTCTCTA TTCACCGTGA TAATTGGCGC TCAGAAACCA AACGTAGCGA TACATTTGAG CCTTGGTATA GGCAGATGCT GCGTAAGGGA GTAGAATGA
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Protein sequence | MTLSEKSWTL ALFVASVISS AWWPTIPDWR WLLLGIITTG SIIKLRRGLI SIGAIAGFMV VIVHGNVLES QRQALFQAGE NITIIGKVDS PFTQISHGYE GIVALKKVNS QTLLPFLKPK IRLITPFPLD VNSEFTTSVS LKPITGLRNE AGFDAEKHAM GKSIIARGVV NKDVTWIIRS TTSLRQAIIA DVSEDVSSLH HFSLINALVF ADRSWLSKED WQALRDSGLL HLVSISGLHI GMAFTFGVVV GGAIRYALPQ YQLLPSLCGL MFAVAYAWLA DFSLPTTRAV SVCVIYVVLK YTLVHWASWR VLLLAVALQL LVQPFASYSM SFWLSYLSVC AVLFAINLVR HQNGGWKAKL KVLLLTQLML SALIVPISGY YFSGFSLSSI AYNLAFIPWF GFIVVPLMFL ALFSSLFLEM IAKPLWQLVD WSLQPLSTSI QYAIGSWQAI SIEMTGLILA GIICLVFQRF MFQYAWCLLL GIVISIKLTS EYDQQHWRID VLDVGHGLAV IVEKDDKVLL YDTGKAWQNG SIAEQVVTPV LHQRGYESID TMILSHSDND HAGGRLFIED SFSPQRKLSS QNFIGYESCT RGDHWKWQGL NIEVLWPPAL VQRAYNPHSC VLRLTDPIST FSMLFTGDIE TISEWILLRE PEKLKSDVML VPHHGSKSSS NPRFIEAVNP SVAVASLAKN NQWGMPAEHV VTAYRKLDIT WLDTGEYGQV SFSIHRDNWR SETKRSDTFE PWYRQMLRKG VE
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