Gene PputW619_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1508 
Symbol 
ID6110442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1664890 
End bp1667103 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content67% 
IMG OID641621288 
ProductDNA internalization-related competence protein ComEC/Rec2 
Protein accessionYP_001748382 
Protein GI170720694 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACAG GGATGTTTGC GCTGGCGCTC GGGCTGTTGT GCCTGGGTGT CCTTCCTGAA 
TTGCCATCGG TCGGGTGGCT GTGGCTGCTG CTCTGCGGGG GGCTGTTTTG CCTGTGCACA
CGCCTGTGGC CGCTGGGCTG CTGCGTGCTG GGTATGTGCT GGGCTTGCTG GTCGGCGCAG
CAGGCACTGG ATGATCGCCT GGCCCCAAGC CTGGATGGCC GCACGCTGTG GCTGGAGGGC
AGGGTGGTCG GCTTGCCGAC CAACACGCTG AGTGGTGTGC GCTTTGAGCT GGAACAGCCT
CGCTCGCGCC GCGCTGCGTT GCCCAAGCGC CTGCAATTGC ATTGGTTCGA TGGCCCGCCG
GTGCGTGCTG GCGAGCGCTG GCGCCTGGCT GCTACCTTGC AGCGCCCGGC CGGGCTGCTC
AACCCTCATG GTCCGGACCG GGAGGCACAG TTGTTGGCCA AGCGCATCGG CGCCACTGGC
ACGGTCAAGG CCGGCCATGT GCTGGATACC GGGCAGCCGG GGTGGCGTGA CGCACTGCGC
CAGCGCTTGT TGAGCGTCGC CGCGCATGGC CGGGAAGCGG CCCTTGTCGC ATTGGTGCTC
GGCGATGGCG CCGGCCTGGC CCGTGAGGAC TGGCAAGCGC TGCAGGCCAC GGGCACGGTA
CACCTGTTGG TGATCTCGGG GCAGCACATC GGCCTGGTCG CCGGCCTGCT TTACGCCTTG
GTCGCGGGCC TGGCGCGCTG GGGCCTGTGG CCTCAGGCTC TACCTTGGTT GCCGTGTGCG
TGTGGCCTGG CACTGGGTGC GGCGCTGGCC TATGGCTGGC TGGCCGGTGC GGGGGTGCCG
GTGCAGCGCG CCTGCCTGAT GCTGGCGGTG GTTCTGCTCT GGCGCCTGCG CTTTCGCCAT
CTTGGGGCGC TGTTTCCTTT GCTGCTGGCA CTTATCGGGG TGCTGGTCGC CGAGCCCCTG
GCGCCGCTGC TGCCAGGGTT CTGGCTGTCG TTTGCGGCGG TGGCGACCCT GGTCTACTGC
TTCAGTTCAC GTCTGGGCCG ATGGCGGCCC TGGCAAGGGT GGACCCGCGC CCAGTGGGTG
ATCGCCATCG GCCTGCTGCC GGTACTGATT GCGACCGGTC TGCCGGTCAG TCTGAGTGCG
CCACTGGCCA ACTTGCTGGC AGTGCCGTGG ATCAGCCTCG CGGTATTGCC CTTGGCGCTG
CTTGGAACGT TGCTGCTGCC GTTGGCAGGG GTAGGTGAAG GTCTGTTGTG GTTGGCGGGC
GGGCTGCTGG ATGTCTTGTT CCGGTTGCTG GCTTGGGTAG CGCATTGGCG CCCGGCATGG
CTACCGCCTG CTTTGCCGGT CTGGGCCTGG CTGATGGTCT GCCTGGGCGC GTTGCTGGTG
CTGCTGCCGT CCGGTGTACC TCTACGCAGC CTGGGCGGGG CCATGCTGCT GGCATTGTGG
GTGCCCAGGG AGGCTGTGCC GCAGGGGCAG GTGGAGGTCT GGCAGTTGGA TGTCGGGCAG
GGCTTGGCGG TATTGCTGCG CACGCAAAAT CACAGTCTGC TTTACGACGC CGGCCCGGCG
CGGGGTGATA GTGATCTGGG TGAGCGGGTG GTGTTGCCGA CCCTGCACAA GTTGGGCGTA
AAGCGCTTGG ACATCATGCT TATCAGTCAT GCCCATGCCG ACCATGCGGG TGGCGCGCCG
GCCGTCTACC GTGGGTTGCC GGTGGTCCGT GTGCTGGGCG GCGAAGTGTT GGAGGACCTT
GCACTGCAGC CTTGTGCCAG TGATGAGCAG TGGGAATGGG ATGGCGTGCG CTTTTCGCTG
TGGCATTGGG CCCAGGGGCA GAGCAGCAAC GATCGCTCTT GCGTGCTGCT GGTCGAGGCA
CAGGGGGAGC GGCTGCTATT GGCAGGCGAT ATGGAGGCGG GGGCCGAGCG CGCATGGTTG
GCGGCCCACG CGACGCCTCG TATCGATTGG CTGCAGTCAC CGCACCATGG CAGCCGTAGT
TCCTCGACCG AGGCATTCAT CCGCGCCACG GCGCCGCGCG GCGTGCTGAT TTCGCGGGGG
CGTAACAACG GTTTTGGGCA TCCGCATGTG CAGGTGATCG AGCGGTATCG GCGGCATGGG
GTGGCCATTC ACGATACGGC GGTAGAGGGG GCGTTGCGGT TGGTGCTGGG CAACCATGGC
GAGGTGGAGG GGGTGCGGGG GCAGAAACGC TTTTGGCGGG GCAGTGTGCC GTGA
 
Protein sequence
MRTGMFALAL GLLCLGVLPE LPSVGWLWLL LCGGLFCLCT RLWPLGCCVL GMCWACWSAQ 
QALDDRLAPS LDGRTLWLEG RVVGLPTNTL SGVRFELEQP RSRRAALPKR LQLHWFDGPP
VRAGERWRLA ATLQRPAGLL NPHGPDREAQ LLAKRIGATG TVKAGHVLDT GQPGWRDALR
QRLLSVAAHG REAALVALVL GDGAGLARED WQALQATGTV HLLVISGQHI GLVAGLLYAL
VAGLARWGLW PQALPWLPCA CGLALGAALA YGWLAGAGVP VQRACLMLAV VLLWRLRFRH
LGALFPLLLA LIGVLVAEPL APLLPGFWLS FAAVATLVYC FSSRLGRWRP WQGWTRAQWV
IAIGLLPVLI ATGLPVSLSA PLANLLAVPW ISLAVLPLAL LGTLLLPLAG VGEGLLWLAG
GLLDVLFRLL AWVAHWRPAW LPPALPVWAW LMVCLGALLV LLPSGVPLRS LGGAMLLALW
VPREAVPQGQ VEVWQLDVGQ GLAVLLRTQN HSLLYDAGPA RGDSDLGERV VLPTLHKLGV
KRLDIMLISH AHADHAGGAP AVYRGLPVVR VLGGEVLEDL ALQPCASDEQ WEWDGVRFSL
WHWAQGQSSN DRSCVLLVEA QGERLLLAGD MEAGAERAWL AAHATPRIDW LQSPHHGSRS
SSTEAFIRAT APRGVLISRG RNNGFGHPHV QVIERYRRHG VAIHDTAVEG ALRLVLGNHG
EVEGVRGQKR FWRGSVP