Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2423 |
Symbol | |
ID | 4252994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2885709 |
End bp | 2888030 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638119055 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_734551 |
Protein GI | 113970758 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.395966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGAT TCATTTTTGG CTTTAGTGCC ACCTTATTAT CAGCGATGTT GTGGCCTTCG CTGCTGCCAA TCAGTTGTTT ACCCTACCTT TGCCTTGGGG CGCTCATCTT ATTCAAAAAA GCACCTAGTT TGTCAGGCGT GCTCTTTGCG ATGTGTTGGC TTACTGGGTT TTGTTTAGTC TTATCTCGCC AGGAGCTTCC TTTATCGCAA CAGCCTATTC ACGTGAGGGG CGAAATCATA TCACTTGTTA GTCAAAACAG CGACTGGGTT AGCTTCGATA TTATTGTCGA TAAACCAAAT TTAATCTTTG TGCCAAGGGC GAAATTGCGT TTGACCTGGC AATCCTCGGA GACGCTGCAA GTTGGGCAAG TGTGGTCTTT TACCCTGATG CCTAAAAGTA TCTCGAGCGT GTTGAATCAA GGTGGTTACA ACGAACAAAA GCAATTGATT AGCCAACATA TTGTCGGCAA GGGGCGGGTG CTACACGCCA AGCTGCAAAC ATCACATTTC TCATTAAGAA ATCATCTCAT CGAGCAGTTA GCTCCCAAGC TGTCGACGTT AGCGCAGGGT GATATTTTGC TGGCACTTAT TTTGGGGGAT AAGCAACTCA TATCAGCGAG CAAGTGGCAG GACTTGAGGC AAACGGGAAC AGGGCATTTA GTGGCGATAT CGGGACTACA TTTATCGGTG ATCACCGCTT GGGTGTATTC CTGTATTTTG TTTTTACTCA CTCGAGTGGC GGCGCATCCT AGCAGGCGTA ATTTAGTGAT TGCCCTATTG CTCGCCGGAG CAAGCGCCTT TTTTTATAGC TACTTAGCGG GATTTGCCGT CTCGACGCAA CGTGCACTAG TGATGATTTT ATTGATCATG CTACTAAGTC TATTAAGGCG TTACTCGAGT GCTTGGGACC GTTTGTTGTT TGCACTCTTT ATTGTGCTTT TAGTCGATCC ACTTGCCTGT TTGAGTGCTG GGTTCTGGCT GTCGTTTTGT GCTCTAGCGA TTATTTTATA TACCTTAGAA AGCGCGCCAG TCGCCCAATC TATTGAAAAT AAGGCCACTT TTATGGTTAG GGCGAGAATA AGATTCGCGC AATTTTGGTC GATTCAATGG CGTTTAAGTC TGGTATTAGG ATTGGTTCAG GCTATCTTTT TCGGCGGCTT GAGTGTGCAT AGTCTCTGGA TTAATATGCT GGTGGTGCCT TGGTTTAGTC TTATCGTTAT TCCACTGTCG ATGCTGGCTC TTATCATCTG GTGGATAGGC ACACTTTTCG GGCAATCATG GTTCGGATTC TTTAATCTGG CAGATGTAAC CCTATTACCC TATGGCAAGT TACTCGAACT CAGCGGCGAT TTACCCGCCC ATTGGTATGC TGTTTCCGAA ACATTATTAG CGGGCAGCCT GTGTGCACTC TTGGCGATGA TATTGTGGCG CTATCTTCCG CATCATTGTC GATATGGGCT ATGGCATTTA CCAATCGCCT TGCTGTTTAT TCCCCTTATA TTATTAATTT TACAGCGTAT TACAGAACCC TCTTCGCCTA AATGGACACT GCATCTACTC GATGTGGGGC AGGGATTAGC GGTAGTGATT GAACAGGAGA ACCGGGCACT TATCTATGAT ACGGGCGCCG CCTATGGTGA GGGTTTTAGC TATAGCGAAC GGGTGATTAT CCCGTTTCTT AATCGTAAAG GGGTGGCTCT GGTGGATTAT ATTGTCGTGA GCCATGGCGA TAACGACCAT GCCGGCGGCG CAAAGGTATT GGCCAAAGCC TATCCCAGCG CAAACTGGAT AACTGATGTG GCTCACTTAG GTGGTACGCC TTGTTTGCCG CAGCAAATTC AGTGGCTGCA ATTAAAGCTA AGCTTTATTT CCCCACCGAC GGCTACAGGT GGAAATAACG CCTCCTGTGT GCTGCGTATC GATGATGGCG TGAACAGCCT GTTACTCAGC GGGGATATAG AGAAGGAAAC CGAAGCCCTA TTGATAGCAC AATCACTTAT AGGTACTGAG CTCAAAAGCA AAGTGTTAAT TGCGCCGCAC CATGGTAGCC GAACCTCATC AACGCCTGCT TTTATTGATG CCGTCGCTCC TGAATTAGTA CTGTTTCCCG CAGGCTTGAA CAATCGCTAT GGCTTCCCAA AGCCTGATGT GGTTGCACGC TATCAGGCGC GGCAGATAAG CTATTTAACG ACAGGGCTTG AAGGCCAAAT TAGTGTCAAC TTTACAAATG GGCGGTTGGA GGTGAAAACC TATCGGCGTG ATTTAGCGCC ATTTTGGTAT AACCGCTTGT TTAGATTTGG TGACTTGATT AATCCAGAGT AG
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Protein sequence | MNGFIFGFSA TLLSAMLWPS LLPISCLPYL CLGALILFKK APSLSGVLFA MCWLTGFCLV LSRQELPLSQ QPIHVRGEII SLVSQNSDWV SFDIIVDKPN LIFVPRAKLR LTWQSSETLQ VGQVWSFTLM PKSISSVLNQ GGYNEQKQLI SQHIVGKGRV LHAKLQTSHF SLRNHLIEQL APKLSTLAQG DILLALILGD KQLISASKWQ DLRQTGTGHL VAISGLHLSV ITAWVYSCIL FLLTRVAAHP SRRNLVIALL LAGASAFFYS YLAGFAVSTQ RALVMILLIM LLSLLRRYSS AWDRLLFALF IVLLVDPLAC LSAGFWLSFC ALAIILYTLE SAPVAQSIEN KATFMVRARI RFAQFWSIQW RLSLVLGLVQ AIFFGGLSVH SLWINMLVVP WFSLIVIPLS MLALIIWWIG TLFGQSWFGF FNLADVTLLP YGKLLELSGD LPAHWYAVSE TLLAGSLCAL LAMILWRYLP HHCRYGLWHL PIALLFIPLI LLILQRITEP SSPKWTLHLL DVGQGLAVVI EQENRALIYD TGAAYGEGFS YSERVIIPFL NRKGVALVDY IVVSHGDNDH AGGAKVLAKA YPSANWITDV AHLGGTPCLP QQIQWLQLKL SFISPPTATG GNNASCVLRI DDGVNSLLLS GDIEKETEAL LIAQSLIGTE LKSKVLIAPH HGSRTSSTPA FIDAVAPELV LFPAGLNNRY GFPKPDVVAR YQARQISYLT TGLEGQISVN FTNGRLEVKT YRRDLAPFWY NRLFRFGDLI NPE
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