| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1473 |
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| Symbol | |
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| ID | 5869242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1656751 |
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| End bp | 1658967 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641546580 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_001667714 |
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| Protein GI | 167032483 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACAG GGATGTTTGC GCTCGCGCTC GGGCTTTTGT GCCTGGGCTT TCTCCCCGCG
TTGCCATCGG TCGGATGGCT GCTGGTGCTG GCCGGCTGCG CTGTCGTCAG CCTGTTTACC
CGGGGTTGGC CGTTGGGCTG TTTTCTCCTG GGCTTCTGTT GGGCTTGCTG GTCTGCGCAG
CAGGCGCTCG ATGATCGCCT GGCTAGCGGT CTGGATGGCC GCACCCTGTG GCTGGAAGGG
CGGGTGGTTG GTTTGCCGAC CCGAACAGCA CAAGGCGTGC GTTTCGAGTT GGAGGCGGCA
CGCTCGCGGC GGGCCGAACT GCCGCAGCGC CTGCAATTGA GCTGGTTCGA AGGGCCGACA
CTGAGGGCGG GCGAGCAGTG GCGGCTGGCC GTGACCTTGC AGCGTCCGGC TGGGCTGCTC
AATCCGCATG GGCCGGACCG GGAGGCCTAT TTGCTGGCGC GGCGAGTGGG CGCCACGGGC
ACGGTCAAGG CGGGGCAGCT GCTGGCTCCC GTGACCGGTG GCTGGCGCGA TGCGCTGCGT
CAGCGCTTGC TTGCGGTCGA GGCCAATGGT CGTGAGCAAG CGTTGGTGGC GTTGGTGCTG
GGCGATGGAG CGGGCCTGGC CAGGGAGGAC TGGCAGACAT TGCAGGCCAC CGGCACGGTG
CACCTGTTGG TAATTTCTGG CCAGCATATC GGCCTGGTCG CCGGTTTGCT CTACGGCCTG
GTTGCCGTGC TGGCGCGTTG GGGGCTGTGG CCGGCACGGC TGCCATGGCT ACCCTGGGCC
TGCGGTCTGG CCATGACCGC GGCGCTGGGC TACGGCTGGT TGGCCGGCGG CGGTGTGCCC
GTGCAGCGCG CCTGCCTGAT GCTGGCTGTG GTGTTGCTCT GGCGCCTGCG CTTTCGCCAC
CTTGGGGCTT TTTTACCCTT GTTGCTGGCG CTCGTTGCGG TGTTGCTGGT TGAGCCGCTG
GCGGCGCTGC TTCCTGGGTT CTGGCTGTCG TTTGCTGCCG TGGCCACGCT GATCTATTGC
TTCAGTGCTC GCTTGGGCGC TTGGCGGCCC TGGCAGGCTT GGACGCGTGC GCAATGGGTT
GTTGCCATCG GCTTGCTACC GGTACTGCTG GCTACAGGCT TGCCGGTAAG CCTGACTGCA
CCGCTGGCCA ACCTTGTGGC AGTGCCGTGG ATCAGCCTGG CGGTTTTGCC GTTGGCGTTG
CTGGGTACGT TGTTGCTGCC GCTGGGCGGC GTAGGGGAGG CGCTGTTGTG GCTGGCGGGC
GGCTTGCTGG ATTGGCTGTT CCGGCTGCTG GCACTGGTGG CGCAGCAGCG CCCGGCATGG
GTGCCGCCGG CCTTGCCACT GTGGGCCTGG CTGTTGGTCT GTCTGGGTGC GTTGTTGGTT
TTGCTACCCC GCGGTGTGCC GCTGCGCGCG TTGGGAGCGG TGATGCTGCT GGCGCTGTGG
GTGCCCAGGG AGCCGGTGCC GCTCGGGCAA GTCGAGGTCT GGCAGCTGGA CGTTGGCCAG
GGGCTGGCGG TGCTGTTGCG TACCCAGCAT CACAACCTGT TGTATGACGC CGGGCCGGCC
AGGGGCGAAA GTGACCTGGG GGAGCGGGTG GTACTGCCGA CTTTGCATAA GCTGGGGGTG
GCCAGCCTAG ACCTGATGGT GATCAGCCAT GCGCATGCCG ACCATGCGGG TGGGGCGGGG
GCCATTCAGC GGGGTTTGCC GGTCAAGCGG GTTGTCGGTG GTGAAGCGCT GGAACACTTT
GAGCTGCAGC CTTGTGTGAG TGGTGAACAG TGGGAATGGG ACGGCGTGCG CTTTTCGCTG
TGGCACTGGG CTGATGGGCA GAGCAGCAAC GACCGCTCCT GCGTGCTGCT GGTCGAGGCC
CAGGGCGAGC GATTGTTGTT GGCTGGTGAT ATGGAGGCTG GCGCCGAACG GGCCTGGCTG
GCAGCCACTG AAGTGCCCGG AATCGACTGG CTGCAGGCTC CGCACCATGG CAGCCGCAGT
TCGTCCACCG AGGCGTTCAT CCGTGCTACC GCACCGCGTG GGGTTTTGGT TTCGCGTGGG
CGCAACAACA GCTTCGGGCA CCCGCATGCG CAGGTCGTGG AGCGGTATCG GCGGCACGGG
GCGGTGATGC ATGACACGGC GGTGGAGGGG GCGTTGCGGG TGGTGCTGGG GCGGCACGGG
GAAGCGGAAG GTGTGCGGGT GCAGCGGCGA TTCTGGCGTG AGGTCGCAAT TCCCTGA
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| Protein sequence | MRTGMFALAL GLLCLGFLPA LPSVGWLLVL AGCAVVSLFT RGWPLGCFLL GFCWACWSAQ
QALDDRLASG LDGRTLWLEG RVVGLPTRTA QGVRFELEAA RSRRAELPQR LQLSWFEGPT
LRAGEQWRLA VTLQRPAGLL NPHGPDREAY LLARRVGATG TVKAGQLLAP VTGGWRDALR
QRLLAVEANG REQALVALVL GDGAGLARED WQTLQATGTV HLLVISGQHI GLVAGLLYGL
VAVLARWGLW PARLPWLPWA CGLAMTAALG YGWLAGGGVP VQRACLMLAV VLLWRLRFRH
LGAFLPLLLA LVAVLLVEPL AALLPGFWLS FAAVATLIYC FSARLGAWRP WQAWTRAQWV
VAIGLLPVLL ATGLPVSLTA PLANLVAVPW ISLAVLPLAL LGTLLLPLGG VGEALLWLAG
GLLDWLFRLL ALVAQQRPAW VPPALPLWAW LLVCLGALLV LLPRGVPLRA LGAVMLLALW
VPREPVPLGQ VEVWQLDVGQ GLAVLLRTQH HNLLYDAGPA RGESDLGERV VLPTLHKLGV
ASLDLMVISH AHADHAGGAG AIQRGLPVKR VVGGEALEHF ELQPCVSGEQ WEWDGVRFSL
WHWADGQSSN DRSCVLLVEA QGERLLLAGD MEAGAERAWL AATEVPGIDW LQAPHHGSRS
SSTEAFIRAT APRGVLVSRG RNNSFGHPHA QVVERYRRHG AVMHDTAVEG ALRVVLGRHG
EAEGVRVQRR FWREVAIP
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