| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1465 |
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| Symbol | |
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| ID | 5051954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1541006 |
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| End bp | 1543411 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471638 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_001156243 |
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| Protein GI | 145589646 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGCT GCATAGTGGT AGGCGCTTTT TCAGTCGGCG CTTTATATAC AAAACCTCAA
TCTTCTCTAC TTCGATATGC AGCGTTTGGG GCGTTATTTT TTGCTCTTGG ATTTGCTTGG
AATGCACGCT ATGCAGAAAT TCGTTTAAAA AATATCTTAG TACCTGAATT AGAGGGAAGA
GAATTTACCG TCGAGGGAAG GGTGAGCGCA CTTCCGCAGA GCAATCCCTC AGGCGCTAAA
TTTGCATTTG AAATCGATCA AGCATGGTCA GGTAGTGAGC TGCTTGAAAA TTATCCCAAG
CGGATTTATT TAAGTTGGCA GCCGGCATGG AGAAATGCTC AGGAGATACC TGAGATTATT
CCAGGACAGC GCTGGAAGCT AAAAGCCAAA CTAAAGCGCC CTTATGGAGC GCTGAATCCG
CATACTTTTG ACTTTGAGCG TTGGGCATTC CATCAAGATT TTGGCGCCAC TGGATCCGTG
AGGTCTGGAG AGCTGCTGCT AGCTAAGGAG ATTGGTTGGC TAGAGTTTGA ATTACAAATG
GAATTGGCAC GATGGAAGTT GCGCCAGAAA ATTGAAACAC TGCTACCAAC TGATGCGCGC
TATGCAGGAG TGATGATTGC GCTAGTGATG GGGGACCAAA ATGCGATACC TCAGGATGAT
TGGTATGTAT TTAATGCGAC TGGTATTGGG CATTTGATTT CCATATCTGG ATTGCATGTC
ACGATGTTAG CTGGTGTAGG GGCTGCGTTT GCTGCTTTTT TCTGGCGACG AGGTAGTTGG
CCACTTCGTA TTCCTGTGGG TAAGTTCGCT GCCGCTGCTG GTTTTTTGAC AGCATTTATT
TATGCCTGGT TGGCAGGCTT TCAAATACCA GCGCAAAGAA CAATGTACAT GGTTGGTGTG
GTGGCTTTTG CACTTTGGTC TGGTAGAAAT CCAAGAGCAT TTGATATTTG GTGGTGGGCG
TTAGCCTTTG TATTGGTGAT AGACCCAATG GCGCCTTATA CACCCGGCTT TTGGCTGTCA
TTTGGTGCGG TTGCTGCAAT TTTATTTGCT ATGGGTGATT CTGCAGGCTT GATCGGCATT
CCCACTGGTA AAGAATTGGA AGTTCACTGG GTAGCCAGAC TATCGCAGGC TTTTCGTGAA
GCTTGTCGTG TACAAGCAGT GGTCACAATT GCACTCTTAC CCTTCACCTT GTATTGGTTC
TATCAGGTAT CCGTTGTATC GCCAGTTGCT AATGCGATTG CTATTCCCTT GGTGAGCTAT
ATCGTGACAC CGCTAGCTAT TTCAGGGGCA TTACTTCCAG ATTTTATTGG CCGATGGCTA
TTGCTCCTTG CACATATATC GATGGAGTAT TTAGCAATTT TTCTAGAGTG GTTGGCATCC
TGGAAATGGG CGGTAGTTTG GTCTCAACAA CCAGAATGGT GGTTATTGTT GCTATCAGGC
ACTGGCATTA TTTATGCCAT AAGACCCGGA AATTTAGCGA ATGATTGGCA GCTAAGGTCT
GTTTGCTTAC TAATACCTCT ACCACTACTA CTCGTAGCAT TTAATCCATT TATGAAGTCT
CTAGATCCGG GGGAATTTAA AGCAACCGTT TTAGATATTG GACAAGGCAC TTCGGTATTA
ATCGAAACAG CGAATAAAAA ATTACTTTAT GACACCGGTC CTATGCAAGG TAAAAAAGAT
GATGCCGGCA AGCGAGTCAT TCTTCCGTAT TTGCGAGGAA GAGGGATTAA TAGAATCAAT
CGAATGGTTA TTAGTCATAG CGATAGTGAT CACGTTGGCG GGGCAACTTC ACTTCTAAAG
CAAATTCAAT TTGATTCAAT GCTGGGATCC TTGCCCAGTA ATAATGCTTT GCTGAATAAT
TTACAAACTC GAAAAATTCC TAGCATTCCT TGTCGATTCA GGCAGCGTTG GATTTGGGAT
GGCGTAGAGT TTTTGATTTG GCATCCCCAT GAGGAGACTC TTTTTCAGGA GCAGTACACG
GGCAAGCCCA ATGAGATGAG CTGTGTTCTT GAGGTGCGAA ACAGTACTAC CTCCTTCTGG
CTTACTGGCG ATGTGGAGAA GCAAGGAGAA GCTGAGATGG TAAGTCGATT AGATGAATCG
GCATTGAATC AAATTGGTGA TCGCGAGATC ATTTTTATGG CACCACATCA CGGAAGTAAA
ACCTCCTCAT CTTTAGAGCT ACTTCAAGTG TTGAGCCCTA GTATTGCATT TGCCCAAAAT
GGATATCGGA ATCGATATGG GCATCCTCAT CCGACCGTTA CAGCTCGTTA TGAAGCCTTG
CAAATCCCGT TTTATCAAAC ACCGACAACG GGCGCTCAAG TATGGGTATT TGAAAGAGGA
AAAAAACATT CCCCTCTCTT TTGGAGGCAT GATATAAAAC GTTTATGGCA TCGAGAGGGT
AATTAG
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| Protein sequence | MIGCIVVGAF SVGALYTKPQ SSLLRYAAFG ALFFALGFAW NARYAEIRLK NILVPELEGR
EFTVEGRVSA LPQSNPSGAK FAFEIDQAWS GSELLENYPK RIYLSWQPAW RNAQEIPEII
PGQRWKLKAK LKRPYGALNP HTFDFERWAF HQDFGATGSV RSGELLLAKE IGWLEFELQM
ELARWKLRQK IETLLPTDAR YAGVMIALVM GDQNAIPQDD WYVFNATGIG HLISISGLHV
TMLAGVGAAF AAFFWRRGSW PLRIPVGKFA AAAGFLTAFI YAWLAGFQIP AQRTMYMVGV
VAFALWSGRN PRAFDIWWWA LAFVLVIDPM APYTPGFWLS FGAVAAILFA MGDSAGLIGI
PTGKELEVHW VARLSQAFRE ACRVQAVVTI ALLPFTLYWF YQVSVVSPVA NAIAIPLVSY
IVTPLAISGA LLPDFIGRWL LLLAHISMEY LAIFLEWLAS WKWAVVWSQQ PEWWLLLLSG
TGIIYAIRPG NLANDWQLRS VCLLIPLPLL LVAFNPFMKS LDPGEFKATV LDIGQGTSVL
IETANKKLLY DTGPMQGKKD DAGKRVILPY LRGRGINRIN RMVISHSDSD HVGGATSLLK
QIQFDSMLGS LPSNNALLNN LQTRKIPSIP CRFRQRWIWD GVEFLIWHPH EETLFQEQYT
GKPNEMSCVL EVRNSTTSFW LTGDVEKQGE AEMVSRLDES ALNQIGDREI IFMAPHHGSK
TSSSLELLQV LSPSIAFAQN GYRNRYGHPH PTVTARYEAL QIPFYQTPTT GAQVWVFERG
KKHSPLFWRH DIKRLWHREG N
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