Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1465 |
Symbol | |
ID | 5051954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1541006 |
End bp | 1543411 |
Gene Length | 2406 bp |
Protein Length | 801 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471638 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_001156243 |
Protein GI | 145589646 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGCT GCATAGTGGT AGGCGCTTTT TCAGTCGGCG CTTTATATAC AAAACCTCAA TCTTCTCTAC TTCGATATGC AGCGTTTGGG GCGTTATTTT TTGCTCTTGG ATTTGCTTGG AATGCACGCT ATGCAGAAAT TCGTTTAAAA AATATCTTAG TACCTGAATT AGAGGGAAGA GAATTTACCG TCGAGGGAAG GGTGAGCGCA CTTCCGCAGA GCAATCCCTC AGGCGCTAAA TTTGCATTTG AAATCGATCA AGCATGGTCA GGTAGTGAGC TGCTTGAAAA TTATCCCAAG CGGATTTATT TAAGTTGGCA GCCGGCATGG AGAAATGCTC AGGAGATACC TGAGATTATT CCAGGACAGC GCTGGAAGCT AAAAGCCAAA CTAAAGCGCC CTTATGGAGC GCTGAATCCG CATACTTTTG ACTTTGAGCG TTGGGCATTC CATCAAGATT TTGGCGCCAC TGGATCCGTG AGGTCTGGAG AGCTGCTGCT AGCTAAGGAG ATTGGTTGGC TAGAGTTTGA ATTACAAATG GAATTGGCAC GATGGAAGTT GCGCCAGAAA ATTGAAACAC TGCTACCAAC TGATGCGCGC TATGCAGGAG TGATGATTGC GCTAGTGATG GGGGACCAAA ATGCGATACC TCAGGATGAT TGGTATGTAT TTAATGCGAC TGGTATTGGG CATTTGATTT CCATATCTGG ATTGCATGTC ACGATGTTAG CTGGTGTAGG GGCTGCGTTT GCTGCTTTTT TCTGGCGACG AGGTAGTTGG CCACTTCGTA TTCCTGTGGG TAAGTTCGCT GCCGCTGCTG GTTTTTTGAC AGCATTTATT TATGCCTGGT TGGCAGGCTT TCAAATACCA GCGCAAAGAA CAATGTACAT GGTTGGTGTG GTGGCTTTTG CACTTTGGTC TGGTAGAAAT CCAAGAGCAT TTGATATTTG GTGGTGGGCG TTAGCCTTTG TATTGGTGAT AGACCCAATG GCGCCTTATA CACCCGGCTT TTGGCTGTCA TTTGGTGCGG TTGCTGCAAT TTTATTTGCT ATGGGTGATT CTGCAGGCTT GATCGGCATT CCCACTGGTA AAGAATTGGA AGTTCACTGG GTAGCCAGAC TATCGCAGGC TTTTCGTGAA GCTTGTCGTG TACAAGCAGT GGTCACAATT GCACTCTTAC CCTTCACCTT GTATTGGTTC TATCAGGTAT CCGTTGTATC GCCAGTTGCT AATGCGATTG CTATTCCCTT GGTGAGCTAT ATCGTGACAC CGCTAGCTAT TTCAGGGGCA TTACTTCCAG ATTTTATTGG CCGATGGCTA TTGCTCCTTG CACATATATC GATGGAGTAT TTAGCAATTT TTCTAGAGTG GTTGGCATCC TGGAAATGGG CGGTAGTTTG GTCTCAACAA CCAGAATGGT GGTTATTGTT GCTATCAGGC ACTGGCATTA TTTATGCCAT AAGACCCGGA AATTTAGCGA ATGATTGGCA GCTAAGGTCT GTTTGCTTAC TAATACCTCT ACCACTACTA CTCGTAGCAT TTAATCCATT TATGAAGTCT CTAGATCCGG GGGAATTTAA AGCAACCGTT TTAGATATTG GACAAGGCAC TTCGGTATTA ATCGAAACAG CGAATAAAAA ATTACTTTAT GACACCGGTC CTATGCAAGG TAAAAAAGAT GATGCCGGCA AGCGAGTCAT TCTTCCGTAT TTGCGAGGAA GAGGGATTAA TAGAATCAAT CGAATGGTTA TTAGTCATAG CGATAGTGAT CACGTTGGCG GGGCAACTTC ACTTCTAAAG CAAATTCAAT TTGATTCAAT GCTGGGATCC TTGCCCAGTA ATAATGCTTT GCTGAATAAT TTACAAACTC GAAAAATTCC TAGCATTCCT TGTCGATTCA GGCAGCGTTG GATTTGGGAT GGCGTAGAGT TTTTGATTTG GCATCCCCAT GAGGAGACTC TTTTTCAGGA GCAGTACACG GGCAAGCCCA ATGAGATGAG CTGTGTTCTT GAGGTGCGAA ACAGTACTAC CTCCTTCTGG CTTACTGGCG ATGTGGAGAA GCAAGGAGAA GCTGAGATGG TAAGTCGATT AGATGAATCG GCATTGAATC AAATTGGTGA TCGCGAGATC ATTTTTATGG CACCACATCA CGGAAGTAAA ACCTCCTCAT CTTTAGAGCT ACTTCAAGTG TTGAGCCCTA GTATTGCATT TGCCCAAAAT GGATATCGGA ATCGATATGG GCATCCTCAT CCGACCGTTA CAGCTCGTTA TGAAGCCTTG CAAATCCCGT TTTATCAAAC ACCGACAACG GGCGCTCAAG TATGGGTATT TGAAAGAGGA AAAAAACATT CCCCTCTCTT TTGGAGGCAT GATATAAAAC GTTTATGGCA TCGAGAGGGT AATTAG
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Protein sequence | MIGCIVVGAF SVGALYTKPQ SSLLRYAAFG ALFFALGFAW NARYAEIRLK NILVPELEGR EFTVEGRVSA LPQSNPSGAK FAFEIDQAWS GSELLENYPK RIYLSWQPAW RNAQEIPEII PGQRWKLKAK LKRPYGALNP HTFDFERWAF HQDFGATGSV RSGELLLAKE IGWLEFELQM ELARWKLRQK IETLLPTDAR YAGVMIALVM GDQNAIPQDD WYVFNATGIG HLISISGLHV TMLAGVGAAF AAFFWRRGSW PLRIPVGKFA AAAGFLTAFI YAWLAGFQIP AQRTMYMVGV VAFALWSGRN PRAFDIWWWA LAFVLVIDPM APYTPGFWLS FGAVAAILFA MGDSAGLIGI PTGKELEVHW VARLSQAFRE ACRVQAVVTI ALLPFTLYWF YQVSVVSPVA NAIAIPLVSY IVTPLAISGA LLPDFIGRWL LLLAHISMEY LAIFLEWLAS WKWAVVWSQQ PEWWLLLLSG TGIIYAIRPG NLANDWQLRS VCLLIPLPLL LVAFNPFMKS LDPGEFKATV LDIGQGTSVL IETANKKLLY DTGPMQGKKD DAGKRVILPY LRGRGINRIN RMVISHSDSD HVGGATSLLK QIQFDSMLGS LPSNNALLNN LQTRKIPSIP CRFRQRWIWD GVEFLIWHPH EETLFQEQYT GKPNEMSCVL EVRNSTTSFW LTGDVEKQGE AEMVSRLDES ALNQIGDREI IFMAPHHGSK TSSSLELLQV LSPSIAFAQN GYRNRYGHPH PTVTARYEAL QIPFYQTPTT GAQVWVFERG KKHSPLFWRH DIKRLWHREG N
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