Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1702 |
Symbol | |
ID | 3966489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2172859 |
End bp | 2175378 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920783 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_527174 |
Protein GI | 90021347 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0283023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAATA GCTTACTACT GTGTTTTTTA ATCCCTCTAG GGGCTGTGGT TTGGCTGCCA TCCGCGCCAT GCTCTCTCTC AACAGCCGTT ATTGTTATTC TCTCTTTAGT GGGGTTATAC CTCTTTCTCC ATTTTCTTCG ATATTTACAA AGCGTACGCA TTGTAATTGC TATGCTATTG GCTGCCTTAC TTGGCGTGAG CATGGGGGTT GCACGTATTT CCCATGTAGT AAATGCGCAG TTACCCGTAG AGCTTGAGCT GCAAGATTTA AACGTACACT TTGAGGTTGC GTCTTTGCCG CAGGTAGGTG CGCTAAGCAC GCGGTTTATT GCCAAGCCTG TGTCTATCGC ATGTACAGAG ACTGTGAGCC TTGCTCAGCC GTTAAAATGT AAAGCGCTTA CGCCTTGGCG GGAATCTATT AGGCTGTCTT GGTATGGTGC ACCCGCGTTA GAGGTTGGGC AGCAGTGGCA GGTAACCGTG CGGTTGCGTA AACCTCGGGG CCTTGTAAAT ACCGATGGCT TTGATTATCA CGCGTGGTTG TTACAGCAGG GCATTATGGC AACCGGCTAT GTGCGCACTA AAGATAAAGT TGTAAATGTT TCGCAACTTG CAAGTGGGCT TGCAACGTTT GAAGCGCGTC GCCAGTGGTT AGATAATGCG TTTACCAAAG CCGAAAACAA GCTGCGCCAT CACGATTTAA TGCGGGCCTT GGCGTATGGC GATAAATCGC ATATTAATAC TGCGCGCTGG GCAGTATTAA ACAAGTCTGG CACCGTGCAT TTAATGGCGA TATCTGGCTT ACATATCGGG TTAATTGCCA CTTTAGGTTG GTGGTTTGGC TTTGGGCTAT TAAAAGCCAG TGCTAGATTA CATCGATCCT CTTATTTTGT ACTTGCCTTG CCTTTTATTT TTTCAATTTT ATTTTCATTT TTTTATGCGG GGTTAGCAGG CTTTGCGGTG CCTACTATGC GGGCGCTTAT TATGGTGGTT GCAGTTAACT TTGCGCTAAT AACAGGCAAA TATTTTAGCG GTGTACGTAT ATTAATAATT GCTGCCATTG TTGTTGTGCT GGTAGACCCA TTTGCGTTTT TATCTGCAGG GTTTTGGTTA AGCTTTGGTG CGGTTGCGTG TCTGTTTTTT AGTTTTACTG CAAAACCTGC TGCGTTTGCT ACAAATGTTG AAACAACCAA GGCTTTTGCT AGCGCAAGTA AAATACTGCG CGGTGCTAAA GCGCTAATGC TCATGCAGTG GCAGTTATTT GTTGGGTTAT TCGTGCTTTT AATTGTGCTT GGCCAGCAAA TTAGCTGGGT AAGTCCGTTT GCTAATGTTG TGGCTGTACC GGTTGTATCT ATTTTGGTCG TGCCTTTGGT TCTATTGGCT AGTGTACTGT TTTCTATTTG GGAATGGGGT GCGCTCGGTT GTTTGCAGGT TGCGGATACA CTCTTAGCTA TAGTGCTTTG GTGGTTGAAT TGGGTGGTAG ATATTCAAAA TACACTGCCT GTATTTAATC TATCGCTTTC TACACCGGCT AAATGGCTGG CATTTTTTGC AACGGTTTTA ATTTTATTGC CACGTGCACT GGCATGTAGA GCACTCGGAG TTGCCATTGC TGTATGTGTT TTCTTTGATC AATCATCCAA ACCAGATAAG TTTGTTGTAA CTGTGCTAGA TGTGGGGCAG GGGTTGTCGG TATTAGTTGA ATCGCCATCG GCTAATTTTT TATACGATGC CGGCGCAGCT TTTTCCGACG ATTTTGATAT GGGGTCGCGG GTTGTTTACC CAGTAATAAA AAGTAAAGGC ATACCCCAGC TAGATGCTGT ATTTGTAAGT CATTCAGATA ACGATCACGC AGGTGGGGTG GGGCCGCTGT TAAATTTAAT GCCCGCATCT AAGGTCATTG CATCGGCTTT AGGTTTAGAA AAAACAACGC ACCTTATAAA TCAAACCGCA CTTTTAAATA CGCCGTTAGC TACCTGTGCT GCCGGTGAGC ATTGGCAGCT AGGGGAGCTT TCTGTTTCGC CTATATGGCC GCCTTCTATG CCCGCGTTAA TACCGTCTTT TGTGAAGCAG GATATAAATA ATCAATCCTG TGTGCTGTTG GTTACTTTCC AAAATAGAAA AATATTGCTG CCAGGCGATA TAGATAAAAC AGTCGAGCGC CATTTAATAG CGAGTGGGTT GCTACCAACA AAAGTGGATT TGCTTGTGGC TGCGCATCAC GGTAGCAAAA CATCCTCATC TAAAGAGTTT ATAGATACCG TAAACGCCAG CTATGTGGTG TATAGCGCAG GCTATAAAAA TAGGTATCAC CACCCAAGTG CAGTGGTTGC TAAACGCTTT GATAAAGCGG GTGCAATTAC ATTTAATACT GCCTTAGATG GAGCTGTAGA ATTTGTGTTT ACTGCAGCAG CGAGTGAGAT TGATGAGGTC CGTGAACGCG TCGTGTTAAT GGAAGAAGAG AAGGGCGATC AAGTGAGAGT TAATACTGCG CGATCTAGCC GCAAGCGATT GTGGTTCTGA
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Protein sequence | MPNSLLLCFL IPLGAVVWLP SAPCSLSTAV IVILSLVGLY LFLHFLRYLQ SVRIVIAMLL AALLGVSMGV ARISHVVNAQ LPVELELQDL NVHFEVASLP QVGALSTRFI AKPVSIACTE TVSLAQPLKC KALTPWRESI RLSWYGAPAL EVGQQWQVTV RLRKPRGLVN TDGFDYHAWL LQQGIMATGY VRTKDKVVNV SQLASGLATF EARRQWLDNA FTKAENKLRH HDLMRALAYG DKSHINTARW AVLNKSGTVH LMAISGLHIG LIATLGWWFG FGLLKASARL HRSSYFVLAL PFIFSILFSF FYAGLAGFAV PTMRALIMVV AVNFALITGK YFSGVRILII AAIVVVLVDP FAFLSAGFWL SFGAVACLFF SFTAKPAAFA TNVETTKAFA SASKILRGAK ALMLMQWQLF VGLFVLLIVL GQQISWVSPF ANVVAVPVVS ILVVPLVLLA SVLFSIWEWG ALGCLQVADT LLAIVLWWLN WVVDIQNTLP VFNLSLSTPA KWLAFFATVL ILLPRALACR ALGVAIAVCV FFDQSSKPDK FVVTVLDVGQ GLSVLVESPS ANFLYDAGAA FSDDFDMGSR VVYPVIKSKG IPQLDAVFVS HSDNDHAGGV GPLLNLMPAS KVIASALGLE KTTHLINQTA LLNTPLATCA AGEHWQLGEL SVSPIWPPSM PALIPSFVKQ DINNQSCVLL VTFQNRKILL PGDIDKTVER HLIASGLLPT KVDLLVAAHH GSKTSSSKEF IDTVNASYVV YSAGYKNRYH HPSAVVAKRF DKAGAITFNT ALDGAVEFVF TAAASEIDEV RERVVLMEEE KGDQVRVNTA RSSRKRLWF
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