| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1702 |
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| Symbol | |
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| ID | 3966489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2172859 |
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| End bp | 2175378 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920783 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_527174 |
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| Protein GI | 90021347 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0283023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAATA GCTTACTACT GTGTTTTTTA ATCCCTCTAG GGGCTGTGGT TTGGCTGCCA
TCCGCGCCAT GCTCTCTCTC AACAGCCGTT ATTGTTATTC TCTCTTTAGT GGGGTTATAC
CTCTTTCTCC ATTTTCTTCG ATATTTACAA AGCGTACGCA TTGTAATTGC TATGCTATTG
GCTGCCTTAC TTGGCGTGAG CATGGGGGTT GCACGTATTT CCCATGTAGT AAATGCGCAG
TTACCCGTAG AGCTTGAGCT GCAAGATTTA AACGTACACT TTGAGGTTGC GTCTTTGCCG
CAGGTAGGTG CGCTAAGCAC GCGGTTTATT GCCAAGCCTG TGTCTATCGC ATGTACAGAG
ACTGTGAGCC TTGCTCAGCC GTTAAAATGT AAAGCGCTTA CGCCTTGGCG GGAATCTATT
AGGCTGTCTT GGTATGGTGC ACCCGCGTTA GAGGTTGGGC AGCAGTGGCA GGTAACCGTG
CGGTTGCGTA AACCTCGGGG CCTTGTAAAT ACCGATGGCT TTGATTATCA CGCGTGGTTG
TTACAGCAGG GCATTATGGC AACCGGCTAT GTGCGCACTA AAGATAAAGT TGTAAATGTT
TCGCAACTTG CAAGTGGGCT TGCAACGTTT GAAGCGCGTC GCCAGTGGTT AGATAATGCG
TTTACCAAAG CCGAAAACAA GCTGCGCCAT CACGATTTAA TGCGGGCCTT GGCGTATGGC
GATAAATCGC ATATTAATAC TGCGCGCTGG GCAGTATTAA ACAAGTCTGG CACCGTGCAT
TTAATGGCGA TATCTGGCTT ACATATCGGG TTAATTGCCA CTTTAGGTTG GTGGTTTGGC
TTTGGGCTAT TAAAAGCCAG TGCTAGATTA CATCGATCCT CTTATTTTGT ACTTGCCTTG
CCTTTTATTT TTTCAATTTT ATTTTCATTT TTTTATGCGG GGTTAGCAGG CTTTGCGGTG
CCTACTATGC GGGCGCTTAT TATGGTGGTT GCAGTTAACT TTGCGCTAAT AACAGGCAAA
TATTTTAGCG GTGTACGTAT ATTAATAATT GCTGCCATTG TTGTTGTGCT GGTAGACCCA
TTTGCGTTTT TATCTGCAGG GTTTTGGTTA AGCTTTGGTG CGGTTGCGTG TCTGTTTTTT
AGTTTTACTG CAAAACCTGC TGCGTTTGCT ACAAATGTTG AAACAACCAA GGCTTTTGCT
AGCGCAAGTA AAATACTGCG CGGTGCTAAA GCGCTAATGC TCATGCAGTG GCAGTTATTT
GTTGGGTTAT TCGTGCTTTT AATTGTGCTT GGCCAGCAAA TTAGCTGGGT AAGTCCGTTT
GCTAATGTTG TGGCTGTACC GGTTGTATCT ATTTTGGTCG TGCCTTTGGT TCTATTGGCT
AGTGTACTGT TTTCTATTTG GGAATGGGGT GCGCTCGGTT GTTTGCAGGT TGCGGATACA
CTCTTAGCTA TAGTGCTTTG GTGGTTGAAT TGGGTGGTAG ATATTCAAAA TACACTGCCT
GTATTTAATC TATCGCTTTC TACACCGGCT AAATGGCTGG CATTTTTTGC AACGGTTTTA
ATTTTATTGC CACGTGCACT GGCATGTAGA GCACTCGGAG TTGCCATTGC TGTATGTGTT
TTCTTTGATC AATCATCCAA ACCAGATAAG TTTGTTGTAA CTGTGCTAGA TGTGGGGCAG
GGGTTGTCGG TATTAGTTGA ATCGCCATCG GCTAATTTTT TATACGATGC CGGCGCAGCT
TTTTCCGACG ATTTTGATAT GGGGTCGCGG GTTGTTTACC CAGTAATAAA AAGTAAAGGC
ATACCCCAGC TAGATGCTGT ATTTGTAAGT CATTCAGATA ACGATCACGC AGGTGGGGTG
GGGCCGCTGT TAAATTTAAT GCCCGCATCT AAGGTCATTG CATCGGCTTT AGGTTTAGAA
AAAACAACGC ACCTTATAAA TCAAACCGCA CTTTTAAATA CGCCGTTAGC TACCTGTGCT
GCCGGTGAGC ATTGGCAGCT AGGGGAGCTT TCTGTTTCGC CTATATGGCC GCCTTCTATG
CCCGCGTTAA TACCGTCTTT TGTGAAGCAG GATATAAATA ATCAATCCTG TGTGCTGTTG
GTTACTTTCC AAAATAGAAA AATATTGCTG CCAGGCGATA TAGATAAAAC AGTCGAGCGC
CATTTAATAG CGAGTGGGTT GCTACCAACA AAAGTGGATT TGCTTGTGGC TGCGCATCAC
GGTAGCAAAA CATCCTCATC TAAAGAGTTT ATAGATACCG TAAACGCCAG CTATGTGGTG
TATAGCGCAG GCTATAAAAA TAGGTATCAC CACCCAAGTG CAGTGGTTGC TAAACGCTTT
GATAAAGCGG GTGCAATTAC ATTTAATACT GCCTTAGATG GAGCTGTAGA ATTTGTGTTT
ACTGCAGCAG CGAGTGAGAT TGATGAGGTC CGTGAACGCG TCGTGTTAAT GGAAGAAGAG
AAGGGCGATC AAGTGAGAGT TAATACTGCG CGATCTAGCC GCAAGCGATT GTGGTTCTGA
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| Protein sequence | MPNSLLLCFL IPLGAVVWLP SAPCSLSTAV IVILSLVGLY LFLHFLRYLQ SVRIVIAMLL
AALLGVSMGV ARISHVVNAQ LPVELELQDL NVHFEVASLP QVGALSTRFI AKPVSIACTE
TVSLAQPLKC KALTPWRESI RLSWYGAPAL EVGQQWQVTV RLRKPRGLVN TDGFDYHAWL
LQQGIMATGY VRTKDKVVNV SQLASGLATF EARRQWLDNA FTKAENKLRH HDLMRALAYG
DKSHINTARW AVLNKSGTVH LMAISGLHIG LIATLGWWFG FGLLKASARL HRSSYFVLAL
PFIFSILFSF FYAGLAGFAV PTMRALIMVV AVNFALITGK YFSGVRILII AAIVVVLVDP
FAFLSAGFWL SFGAVACLFF SFTAKPAAFA TNVETTKAFA SASKILRGAK ALMLMQWQLF
VGLFVLLIVL GQQISWVSPF ANVVAVPVVS ILVVPLVLLA SVLFSIWEWG ALGCLQVADT
LLAIVLWWLN WVVDIQNTLP VFNLSLSTPA KWLAFFATVL ILLPRALACR ALGVAIAVCV
FFDQSSKPDK FVVTVLDVGQ GLSVLVESPS ANFLYDAGAA FSDDFDMGSR VVYPVIKSKG
IPQLDAVFVS HSDNDHAGGV GPLLNLMPAS KVIASALGLE KTTHLINQTA LLNTPLATCA
AGEHWQLGEL SVSPIWPPSM PALIPSFVKQ DINNQSCVLL VTFQNRKILL PGDIDKTVER
HLIASGLLPT KVDLLVAAHH GSKTSSSKEF IDTVNASYVV YSAGYKNRYH HPSAVVAKRF
DKAGAITFNT ALDGAVEFVF TAAASEIDEV RERVVLMEEE KGDQVRVNTA RSSRKRLWF
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