| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5080 |
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| Symbol | |
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| ID | 5750691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5629637 |
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| End bp | 5632135 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641300204 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_001566094 |
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| Protein GI | 160900512 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.411729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0251813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCTG CGGCACCTGC CCAAACCCTC TCGCCGTCTT CCTGGACGCC CCTGCTGCTC
GGCTGCGTGG CCGGTGCGGC CTGGCAGGTC ACGCAGCCGC GCCTGTGGCC GCTGTGGATG
TATCTGCTCT TGGCGGGCAT GGGGCTGGCA GGCCTGGCAT GGAGGGCGTG GCGGGCATGG
GCGGGCCGGC GCGGCCGTGG TGTGCACCGC CTGTGGGCCG CTGTCTGCGC TGCCTTGCTG
GTGGGCGGGT TGACCGGCTG GCGGGCCCAG GACTTTGCGG GCCAGGCGCT GTCTGCGCCG
TTGGAGGGGC GTGACCTGCG CATCGTCGGC GTCGTGGCAT CGCTTCCCCA GAACATGGCC
CAGGGCATGC GCTGGTGCAT GGAGGTGGAG CAGGCTCGGA TCGTCGGCAG CGAAGAGGTC
TTGGCGCCGT TTCCTGCACT GATCGAACTG TCCTGGTATG CCCCCCGTGG CCGGCAGTCC
AGGGGTGTTG CCATGCTGCC CGATCTGCGG CCGGGCCAGC GCTGGGCGCT GACCGTGCGG
CTCAAGCGCC CGCATGGCGC GCGCAATCCC CATGGTTTCG ACTATGAGCT GTGGCAGTGG
GAGCAGGGCG TGCAGGCCAC GGGCCATGTG CGCGAACAGC CCGCTGCACG CCAACTGGCC
GACACCGGCA GCCATGCCCT GCAGCGCTGG CGCCAGCAGA TGCGCGACGC CATCCTGGGC
CGCACATCCG CGCTTGCGGC ATCCCTGCAG CGCATCGGCC TGGACCCTGC CCATGCGCCG
CGCATGCTGG GTGTGGTGGC CGCCCTGGCC ATGGGTGATC AGCAGGCCAT TGCGCGGGAT
GACTGGGCGC TGTTCAGGCA TACCGGCGTG GCCCATCTGA TGAGCATTTC CGGCCTGCAC
ATCACCTTGT TCGCCTGGCT GGCAGCCCTG GTGGTGGGGA GGCTTTGGCG CTGCAGCGCA
CGGGCCTGCC TGTGGTGCCC GGCGCCGCAG GCGGCCCTGC TGGCCGGCGT GCTGCTGGCG
GGCGGCTATG CGCTGTTCAG CGGCTGGGGA CTGCCGGCGC AGCGCACCGT CTGCATGCTG
GCCAGCGTGG CTGCGTTGCG CGGCGCCGGA CTGCGCTGGC CCTGGCCCGC CGTGTGGTGC
CTGGCGCTGG CCGTGGTCGT GGTGCTGGAC CCCTGGGCCC TGTGGCAGGC CGGCTTCTGG
CTGAGCTTTG TGGCCGTGGG CGTGCTGCTG GCCACCGATG CGCGCATGCA GGGCGCGCAG
CGGCCTTCGC TGCCTGCCCG TGCGCTGGCC CTGTGGGGCG AGCAATGGCG CATCTCGCTG
GCGCTGGCGC CGCTGGGCCT GATGCTGTTC GGCCAGCTGT CGTTGTCGGG CCTGCTGGCC
AATCTGGCGG CCATTCCCTG GGTGACCTTC GTGGTCACGC CGCTGGCCCT GCTGGGTGCC
TTGTGGCCGC CATTGTGGAC AGGCGCGGCG CTGGCGCTGG CCCCGCTGCT GGAGCTGCTG
CAATGGCTGG ACCAGTGGGC ATGGGCCGTG GTGCAACTGC CGCAGTCGCC GCTGTGGGCA
GGGCTGGCTG CGCTGTGCGG TGGCCTGGCG CTGGTGGCTC CGGTGCCTGC CGGATGGCGC
TGCTGGGGCC TGGCCATGTG CCTGCCGGCC CTGTGGTGGC CGTCGCCAGC ACCGGCGCAT
GGCGAGTTCG ACCTGATGGC CGTGGACATA GGCCAGGGCA ATGCCGTACT GGTGCGCACG
GCGCGGCATG CCTTGCTGTA TGACACGGGG CCGCAGTACG GCCTGGACAG CAATGCCGGC
GACCGGGTGC TGGTGCCGCT GCTGCAGGCT CTGGGTCTGA GGCTGGATGC CCTGTGGCTC
AGCCACCGCG ACAATGACCA CACGGGCGGT GCATTGGCCG TGCATGCCGC GCAGCCGCAG
GCGCAGGTCT GGGGATCGGA TTCCGTGATC CTCGACCCTG CGCTGGCCGG CCTGGGCGCT
GTGCGCCGCT GCCAGGCGGG CCAGCACTGG GAATGGGATG GCGTGCGGCT GGAGGTGCTG
CATCCGTCTG CCGGCGAACG GTTGCCCTCC GCACGGGCGC TGGCCCATGC CAATGCGGGC
AGCTGCGTGC TGTTGCTGCG CTCGGCATCT GGCGTGCAGG CCTTGCTGGC CGGTGACATC
GAGGCTGCGC AGGAGCGGTC TCTGGCAAGG GCCGGCGCCC TCACGCCCGT GCAGTGGCTG
CTGGTGCCCC ACCACGGCAG CCGCACTTCA TCGAGCACCG CCCTGGTGCA GGCACTGGCA
CCGCGCTGGG CCATGGTGCA GGCGGGATAT CGCAGCCGCT ATGGCCATCC TGTCCCCGAG
GTGGTGCGCC GCTATGAGGC CCATGGCGCC GGCGTGGTGC AGTCGGCCCG CTGCGGTGCG
GCGCACTGGC GCTCTTCGGA CCCCGTGCAC CTGGTCTGCG AGCGGGAAAG GGCGCGCCGC
TATTGGGATG TGCACGTCAC GCAGGGGCAG GGCGGATAG
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| Protein sequence | MHPAAPAQTL SPSSWTPLLL GCVAGAAWQV TQPRLWPLWM YLLLAGMGLA GLAWRAWRAW
AGRRGRGVHR LWAAVCAALL VGGLTGWRAQ DFAGQALSAP LEGRDLRIVG VVASLPQNMA
QGMRWCMEVE QARIVGSEEV LAPFPALIEL SWYAPRGRQS RGVAMLPDLR PGQRWALTVR
LKRPHGARNP HGFDYELWQW EQGVQATGHV REQPAARQLA DTGSHALQRW RQQMRDAILG
RTSALAASLQ RIGLDPAHAP RMLGVVAALA MGDQQAIARD DWALFRHTGV AHLMSISGLH
ITLFAWLAAL VVGRLWRCSA RACLWCPAPQ AALLAGVLLA GGYALFSGWG LPAQRTVCML
ASVAALRGAG LRWPWPAVWC LALAVVVVLD PWALWQAGFW LSFVAVGVLL ATDARMQGAQ
RPSLPARALA LWGEQWRISL ALAPLGLMLF GQLSLSGLLA NLAAIPWVTF VVTPLALLGA
LWPPLWTGAA LALAPLLELL QWLDQWAWAV VQLPQSPLWA GLAALCGGLA LVAPVPAGWR
CWGLAMCLPA LWWPSPAPAH GEFDLMAVDI GQGNAVLVRT ARHALLYDTG PQYGLDSNAG
DRVLVPLLQA LGLRLDALWL SHRDNDHTGG ALAVHAAQPQ AQVWGSDSVI LDPALAGLGA
VRRCQAGQHW EWDGVRLEVL HPSAGERLPS ARALAHANAG SCVLLLRSAS GVQALLAGDI
EAAQERSLAR AGALTPVQWL LVPHHGSRTS SSTALVQALA PRWAMVQAGY RSRYGHPVPE
VVRRYEAHGA GVVQSARCGA AHWRSSDPVH LVCERERARR YWDVHVTQGQ GG
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