Gene Ping_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0899 
Symbol 
ID4624387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1127327 
End bp1129723 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content36% 
IMG OID639796103 
ProductDNA internalization-related competence protein ComEC/Rec2 
Protein accessionYP_942340 
Protein GI119944660 
COG category[R] General function prediction only 
COG ID[COG0658] Predicted membrane metal-binding protein
[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.383263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.740662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATGC GTCTATTATT GTGGCTGTCA ATTATTGTTT TTATATCAAG CCTATTTTGG 
CCACGATTAT TAGACAATAA CGAGATAATA TTTTGTGGCG TTTTATTTAT TTCTTTAATG
TTGATTCCGC GCCTGCGTAT TCTCGCGGTT ATTCCATTTT TTGCTGTCTA TTTCTCACTT
TATACTTCTT TAGCATTAAC GGGAAGTTTT TTTGCTTTTC AACCCGTGAC TAATCTCCCC
TTTTCAAACT CAGCCCCCCT GCAGGCTTCT GTCGATGGGC GAAACCATAG CATAGTTGTG
CAAATTAAAT CCTTAATCAG TGATCAAAAT AGAGGATATT TTCGCGCTAA GTTAGTTGAA
CTTGATGGGC ATCACTTAAG TTACTCTCCT TTATTGGAAA TGCGCTGGTA CGCACCGACA
GTAAAGGTAC AGGAAAACGA AAGACATCTC TTTAAAGTGC GTTTTAAACC TATTTATGGA
CGCGCTAATC CGGCAGGATT TGATCAGCAA AAATACAAGT ACTCTGAACA TATTGGCTAC
CAGGCTATTA TAAAGTCGCA TATTAAAAAG CAAAAATCTG CTTTCTCCTT AAGAGCTTAT
TTATATGAAA GGGTGTTAAA TCTTTCCGAC TCTTTAAACA ACCAAGGCGC TATTCTAGCC
TTATCTTTTG CAGATAAATC ACTAATAAAA TCAGCGCAAA AAGCGTTAAT TCAACAGTTG
GGCATTGCTC ATCTGTTCGC TATTTCAGGT TTACATATTA GCCTGTTTTT TTCCTGTATT
TATTTATGCG TGGCTTATTT TACTCAGCGT TTTTTCCCCA AGAAATACCT TGGCTGGTTT
TCTTGGCGAT TTGTAAACTT AACGGCGTTA CTCGGGGCAT TTTTATATGC TTATTTAGCC
GGTTTTTCCT TACCGACTCA GCGTGCATTT TTAATGTTGT TATTTGCAGT TTGTATTTTA
TCAATGAAAC GAAAGTGCAG TTTGATCGAT CTATTAGGCC TGACATTTTT TATGATTTTA
TTATGGGATC CTTTGGCGCT ACTCAGTTTA AGCTTGTGGT TATCTTATGT GGCAGTATGT
TTAATATTAA TTGTTTTATG GCATTTTCCT CAATTTAAAA ACAGGGAAGA AAAAAATGGT
GAGATTTTTG GATTTACAAA AATAAAACAT TATTTTAAAT TTTTACTGCT TATTCAGTTC
TCTTTGAGTC TGTTAATGTT ACCTATTCAG CTATTAAGTT TTTCATCTTT TTCAATGCTA
GCGCCGTTTA TTAATCTGCT AGCGGTGCCA CTTTTTTCAC TGTTAATTAT TCCTATTACT
TTATTAGCGG TTGTTTTTTC GGTTGTGCAT CAACCAATCG CAGTGCTGTT ATTTACCATT
GCAGATCGTT TGATCAGTTA TTTTTTTATT GTGTTTGAGC AAGCAAAATT TGCCTATCTG
TCCTTTTCCT ATGATCAGGG GAGTTTACTT ATCTTTTTTG TTGTTTTAAT TGTAGTGCTT
TATATTCTAT TTAAACTACA GCATGTTAAT GCTCGCCTCA GTTATTTTTT TACTTTTATA
TTACTCTCAT CGGTTTTATT ATTATTATGG TCAGAAAAAC AAAATAAATC TCACGATTGG
CAGGTCGAGA TCCTAGACAT AGGGCAGGGG TTGTCAGTGT TAGTCAAAAG CCAAGGACAA
AGCCTACTCT ATGATACCGG TCCTCGTTAT CCGTCAGGAT TTACCACTGC TGCTGTTGAG
ACGCTGCCCT ATTTACACTC TATTGGCATT GAACGATTAG ATTATTTTGT GATAAGTCAC
AGTGATATTG ACCATGCGGG TGGCGCGGAT ATCATTAACC GCGCTTTTCT GCCTGAATAT
ATACTGGTAG GCGAGCCGTT AGCGCCTCCA GCACTGCAAA ATGAAAAAAC GATATTGTGC
CGTGCAGGCA TGAAATGGTC ATTAGGTTCA CTGTCAGTAA AAGTGCTATC ACCCTTAAAG
ACGGGTACAA ACAATAATAA TAACTCTTGT GTTTTACGTA TTGATGATGG TAATTATTCA
CTTTTATTGA CGGGAGATAT TGAAAAAAAA CAAGAGATTA AGTTAATTGT ACAATATAGA
GGGGATTTAA AAAGTACGAT TTTGCTTGCC CCTCATCATG GAAGTCGACA TTCATCAACC
AACGCCTTTA TTAAAACCGT CGCGCCACAG TGGGTTGTTT TCAGTGCTGG ATTTATGAAT
CGATGGGGAT TTCCAGCAGC AGAGGTAAAG TTACGTTATC AAGATCAAAA TGTTAGAATG
GTAAACAGCG GTTTGAATGG GTTTATTCGT TTTAAAATAA CAACAGATAA CATTATCATG
CAAACATATC GAGAAGATCT TGCCCCTTAT TGGTATCATC ACTCTTTTTC TCTCTAA
 
Protein sequence
MTMRLLLWLS IIVFISSLFW PRLLDNNEII FCGVLFISLM LIPRLRILAV IPFFAVYFSL 
YTSLALTGSF FAFQPVTNLP FSNSAPLQAS VDGRNHSIVV QIKSLISDQN RGYFRAKLVE
LDGHHLSYSP LLEMRWYAPT VKVQENERHL FKVRFKPIYG RANPAGFDQQ KYKYSEHIGY
QAIIKSHIKK QKSAFSLRAY LYERVLNLSD SLNNQGAILA LSFADKSLIK SAQKALIQQL
GIAHLFAISG LHISLFFSCI YLCVAYFTQR FFPKKYLGWF SWRFVNLTAL LGAFLYAYLA
GFSLPTQRAF LMLLFAVCIL SMKRKCSLID LLGLTFFMIL LWDPLALLSL SLWLSYVAVC
LILIVLWHFP QFKNREEKNG EIFGFTKIKH YFKFLLLIQF SLSLLMLPIQ LLSFSSFSML
APFINLLAVP LFSLLIIPIT LLAVVFSVVH QPIAVLLFTI ADRLISYFFI VFEQAKFAYL
SFSYDQGSLL IFFVVLIVVL YILFKLQHVN ARLSYFFTFI LLSSVLLLLW SEKQNKSHDW
QVEILDIGQG LSVLVKSQGQ SLLYDTGPRY PSGFTTAAVE TLPYLHSIGI ERLDYFVISH
SDIDHAGGAD IINRAFLPEY ILVGEPLAPP ALQNEKTILC RAGMKWSLGS LSVKVLSPLK
TGTNNNNNSC VLRIDDGNYS LLLTGDIEKK QEIKLIVQYR GDLKSTILLA PHHGSRHSST
NAFIKTVAPQ WVVFSAGFMN RWGFPAAEVK LRYQDQNVRM VNSGLNGFIR FKITTDNIIM
QTYREDLAPY WYHHSFSL