| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1769 |
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| Symbol | |
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| ID | 5662164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2149716 |
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| End bp | 2152154 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236359 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_001501627 |
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| Protein GI | 157961593 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.479237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGAT TTATGTGCGG TTACTGCGTC ACCATTGTTT CAACGATGCT TTGGCCCGCT
CTGGCTAATC TTTATTTGCT ACCTTTACTA ATAGTAGTGG TTATTACCGC CTGTAAGCGT
GTGCCATTCA TTGCCGGAGG CTTATTTGCA ATCTGCTGGA TTAGCCTTTT TTATGCGTTA
TTAATGGGCT GGGACACAGA TGAACGAGTC GATACACTGA ATGTTGAGGG CGAGATAGTA
TCACTTGTTC ATACAAACGG CGACTGGATT AGTATGGATA TTGTGCTGAT TGATTCAATT
TCCCCCCATT TGTTTAGTCG AAAGCTTAGA TTGACTTGGA AGGAACCTCC GTCGCTAACC
CCCGGCCAGC ATTGGCTGTT AACCATAAAA CCTAGGCCCA TCACCAGCAC CTTAAATCAG
GGGAGTTATA ACCAGCAAAA GAACTTGTTG GCTAAACACA TTATAGGAAA AGGTAGAGTC
GTTAGTGGGA AGTTATTAAG CCATGAGCCA AATTATCGCA CTCAGTTAAT CGCTGAACTC
AAGCATACAC TTAAGACCCA TGCCAGTGGT GACCTGTTAC TTGCGCTGGT GGCGGGAGAC
AGGACTATGA TCTCAGCAGA GCGCTGGCAA CAGCTGAGAA ACACTGGAGC TGGCCATCTC
TTTGCCATAT CAGGGTTACA CCTTTCAGTG GTTTCACTTT GGCTATTAAT TGGCGCCCGT
TTTTTGTTAT ACCGATATAG CGCAGTAAAT AGCCGCAGAA ATTGGCTGCT GTGCCTGACG
TTGTCGGCAG TGGGGGCCGT TGCCTACGCA TATCTAGCCG GTTTTTCTGT GTCGACACAG
CGGGCGATGA TCATGCTGCT CGCATTTATC TGTTTTAGTG TATTGCAAAG GCACTCTTCC
AGTTGGGAGC GGTTGCTGTA TGCGCTTTTT GTGGTGCTAC TCATGGACCC ATTGAGTATG
TTAAGCGCCA GCTTCTGGTT ATCCTTTAGC GCCTTGGGAA TTATTCTCCT TACGGTGACG
AGGCATACTT TTACACCAAA AAACCTAAGT GCCAGTCTCG ATAGTGGGGC AATGGCGCAA
GCTAACCTGA GTGAGCATGC AACTTTATGG CTTAAGTTTC GCAACGCTTG TGTGGCATTT
TGGGCTGTGC AGTGGCGGTT AACCCTTGGC TTGTGTTTGG TTCAGGCGAT ATTTTTTTCA
GGAACATCGC TAGTGAGTCT AGCGGTTAAT TTACTGCTGG TCCCATGGTT TACGCTGCTT
GTTATTCCTC TGTGCTTGTT GTCGCTGTTG GTCTTTATAT TTGCAACGAG CTTGGGGTTG
TCAGCTGCGG GAATATTTTG GGTTGCGGCA AAGTCAATGG TGCCGGTGAC AGCCATTTTG
AACTACAGCA GTCAATTCGA ATTTGTCTGG CTTGCACTAT CCGATCAAGT TATTGCTGCC
TTGATGGTCG CGTTCATTGG CCTCTACCTG ACGATAAACG TAAAGGATAT TCTCTGGCGG
CTGGTACTAT CAGTGATGTT AATGCCTCTG CTATTAATGA ATCTGTTTAT GTTTGCACCC
ATTGAAGATA AGCGCTGGCA AGTGCATCTG CTCGATGTTG GCCAAGGTCT TTCCTTGGTG
ATAGAGAAGG GTAATCGGGC CATAATCTAT GATACGGGGG CGCGATATGG TGATAGTTTT
AGCTATGCCG AGCGTGTGGT GTTGCCTTTC CTTATTAGTC AAGGCATAGA ACAGCTTGAT
TATCTGGTTG TGAGTCATGG CGATAATGAC CATGCCGGTG GAGCTGAAAT TATTATTCAG
CGTTACCCTA AAACTCTGCT TATTTCAGAT CTTGATATGG GGGGGGAGTC AGCACTTGCA
TCTGAATTTG ATCATAAATT TGCTCATGAA ATCGCTTTAG CACAGCAATA CAGTTGCAGA
CCCAAGATAC TCAAATGGCA AAATCTCACC CTTGAAGTGC TAGCTCCTAG TGAAGCGAGA
GAGGGCAACA ACGGTTCGTG TGTGATCAGA GTGAACGATG CCAGTAACTC TGTGCTATTA
AGCGGAGATA TCGAAAAACT CGCTGAGCGG GCACTGCTTG GTATGATTGA GGAAAAGGGT
AAGGCTGATG GTGAGAATAA TCTAAACTTA CAGAGTCGAT TGCTAATAGC GCCTCATCAT
GGCAGTAAAA CGTCATCGAC AGAGGCTTTT ATCGATGCAG TATCCCCTGA GCTAGTTTTA
TTCCCCGCAG GCTTTAAAAA CCGCTATCGA TTTCCAAATT CTGAGGTGGT TTTACGCTAC
CATCAGCGGG GTATTGCCAC CTTAACCAGT GGAGAACAAG GACAGATAAG TATTATATTT
AATCAACAAA CAATGAAAAT TCGTACATAT CGGTCGGATT TCGCACCATT TTGGTATAAC
CAAGTGTTTA GGTTTGGTCA GATTAACAAT CCGGAGTAG
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| Protein sequence | MNRFMCGYCV TIVSTMLWPA LANLYLLPLL IVVVITACKR VPFIAGGLFA ICWISLFYAL
LMGWDTDERV DTLNVEGEIV SLVHTNGDWI SMDIVLIDSI SPHLFSRKLR LTWKEPPSLT
PGQHWLLTIK PRPITSTLNQ GSYNQQKNLL AKHIIGKGRV VSGKLLSHEP NYRTQLIAEL
KHTLKTHASG DLLLALVAGD RTMISAERWQ QLRNTGAGHL FAISGLHLSV VSLWLLIGAR
FLLYRYSAVN SRRNWLLCLT LSAVGAVAYA YLAGFSVSTQ RAMIMLLAFI CFSVLQRHSS
SWERLLYALF VVLLMDPLSM LSASFWLSFS ALGIILLTVT RHTFTPKNLS ASLDSGAMAQ
ANLSEHATLW LKFRNACVAF WAVQWRLTLG LCLVQAIFFS GTSLVSLAVN LLLVPWFTLL
VIPLCLLSLL VFIFATSLGL SAAGIFWVAA KSMVPVTAIL NYSSQFEFVW LALSDQVIAA
LMVAFIGLYL TINVKDILWR LVLSVMLMPL LLMNLFMFAP IEDKRWQVHL LDVGQGLSLV
IEKGNRAIIY DTGARYGDSF SYAERVVLPF LISQGIEQLD YLVVSHGDND HAGGAEIIIQ
RYPKTLLISD LDMGGESALA SEFDHKFAHE IALAQQYSCR PKILKWQNLT LEVLAPSEAR
EGNNGSCVIR VNDASNSVLL SGDIEKLAER ALLGMIEEKG KADGENNLNL QSRLLIAPHH
GSKTSSTEAF IDAVSPELVL FPAGFKNRYR FPNSEVVLRY HQRGIATLTS GEQGQISIIF
NQQTMKIRTY RSDFAPFWYN QVFRFGQINN PE
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