More than 300 homologs were found in PanDaTox collection
for query gene CPS_2124 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  100 
 
 
860 aa  1744    Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  31.34 
 
 
762 aa  361  3e-98  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  29.41 
 
 
841 aa  298  3e-79  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1818  DNA internalization-related competence protein ComEC/Rec2  30.76 
 
 
765 aa  291  4e-77  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0856288  normal  0.218544 
 
 
-
 
NC_008709  Ping_0899  DNA internalization-related competence protein ComEC/Rec2  30.19 
 
 
798 aa  291  5.0000000000000004e-77  Psychromonas ingrahamii 37  Bacteria  normal  0.383263  normal  0.740662 
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  29.26 
 
 
784 aa  286  1.0000000000000001e-75  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1637  DNA internalization-related competence protein ComEC/Rec2  30.41 
 
 
761 aa  284  5.000000000000001e-75  Shewanella loihica PV-4  Bacteria  normal  0.594703  normal 
 
 
-
 
NC_006369  lpl0663  hypothetical protein  29.88 
 
 
735 aa  282  1e-74  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  29.52 
 
 
800 aa  282  2e-74  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  29.04 
 
 
770 aa  278  4e-73  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp0680  hypothetical protein  29.38 
 
 
735 aa  275  2.0000000000000002e-72  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_2827  DNA internalization-related competence protein ComEC/Rec2  31.48 
 
 
767 aa  276  2.0000000000000002e-72  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0829289 
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  28.86 
 
 
840 aa  273  1e-71  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  29.06 
 
 
812 aa  273  1e-71  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  28.77 
 
 
839 aa  270  7e-71  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1470  ComEC/rec2 family protein  29.43 
 
 
752 aa  270  7e-71  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_1022  recombination protein 2  31.3 
 
 
808 aa  268  2e-70  Haemophilus somnus 129PT  Bacteria  normal  0.949854  n/a   
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  30.99 
 
 
839 aa  267  5.999999999999999e-70  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_008321  Shewmr4_2423  DNA internalization-related competence protein ComEC/Rec2  29.02 
 
 
773 aa  265  3e-69  Shewanella sp. MR-4  Bacteria  normal  normal  0.395966 
 
 
-
 
NC_009708  YpsIP31758_2578  hypothetical protein  29.16 
 
 
763 aa  265  4e-69  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0251432  n/a   
 
 
-
 
NC_010465  YPK_2666  hypothetical protein  29.16 
 
 
763 aa  264  4.999999999999999e-69  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1711  hypothetical protein  29.63 
 
 
737 aa  263  1e-68  Serratia proteamaculans 568  Bacteria  normal  0.0805358  normal 
 
 
-
 
NC_008322  Shewmr7_2493  DNA internalization-related competence protein ComEC/Rec2  29.02 
 
 
773 aa  261  4e-68  Shewanella sp. MR-7  Bacteria  normal  0.105792  normal  0.137051 
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  27.04 
 
 
802 aa  261  5.0000000000000005e-68  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_007951  Bxe_A1569  ComEC/Rec2-related protein  29.16 
 
 
801 aa  259  1e-67  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.304315 
 
 
-
 
NC_010159  YpAngola_A1958  hypothetical protein  28.89 
 
 
763 aa  258  4e-67  Yersinia pestis Angola  Bacteria  hitchhiker  0.0001218  normal  0.195131 
 
 
-
 
NC_011663  Sbal223_2675  DNA internalization-related competence protein ComEC/Rec2  29.34 
 
 
783 aa  257  7e-67  Shewanella baltica OS223  Bacteria  normal  0.923098  normal  0.0587505 
 
 
-
 
NC_009052  Sbal_1682  DNA internalization-related competence protein ComEC/Rec2  29.46 
 
 
783 aa  256  1.0000000000000001e-66  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2389  DNA internalization-related competence protein ComEC/Rec2  28.4 
 
 
831 aa  256  1.0000000000000001e-66  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.00142105  n/a   
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  27.51 
 
 
847 aa  255  2.0000000000000002e-66  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_010681  Bphyt_2564  DNA internalization-related competence protein ComEC/Rec2  28.97 
 
 
929 aa  255  3e-66  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0267783  normal  0.0941772 
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  27.82 
 
 
763 aa  254  6e-66  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2585  DNA internalization-related competence protein ComEC/Rec2  29.21 
 
 
773 aa  252  2e-65  Shewanella sp. ANA-3  Bacteria  normal  normal  0.13038 
 
 
-
 
NC_009997  Sbal195_1704  DNA internalization-related competence protein ComEC/Rec2  29.09 
 
 
783 aa  251  3e-65  Shewanella baltica OS195  Bacteria  normal  0.0286912  normal 
 
 
-
 
NC_012917  PC1_1768  hypothetical protein  26.96 
 
 
763 aa  251  4e-65  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.44185  n/a   
 
 
-
 
NC_009801  EcE24377A_1011  hypothetical protein  28.33 
 
 
754 aa  250  8e-65  Escherichia coli E24377A  Bacteria  hitchhiker  0.00460048  n/a   
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  28.98 
 
 
840 aa  250  8e-65  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2207  hypothetical protein  28.47 
 
 
754 aa  250  1e-64  Escherichia coli SMS-3-5  Bacteria  normal  0.01066  normal  0.239269 
 
 
-
 
NC_011094  SeSA_A1097  hypothetical protein  28.3 
 
 
756 aa  247  8e-64  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01534  hypothetical protein  28.61 
 
 
752 aa  246  9.999999999999999e-64  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009379  Pnuc_1465  DNA internalization-related competence protein ComEC/Rec2  27.82 
 
 
801 aa  246  9.999999999999999e-64  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00917  conserved inner membrane protein  28.33 
 
 
754 aa  246  1.9999999999999999e-63  Escherichia coli BL21(DE3)  Bacteria  normal  0.578469  n/a   
 
 
-
 
CP001637  EcDH1_2730  DNA internalization-related competence protein ComEC/Rec2  28.33 
 
 
754 aa  246  1.9999999999999999e-63  Escherichia coli DH1  Bacteria  normal  0.170872  n/a   
 
 
-
 
NC_012892  B21_00924  hypothetical protein  28.33 
 
 
754 aa  246  1.9999999999999999e-63  Escherichia coli BL21  Bacteria  normal  0.630751  n/a   
 
 
-
 
NC_010468  EcolC_2683  hypothetical protein  28.33 
 
 
754 aa  246  1.9999999999999999e-63  Escherichia coli ATCC 8739  Bacteria  normal  0.692344  normal  0.226957 
 
 
-
 
NC_011353  ECH74115_1074  hypothetical protein  28.37 
 
 
754 aa  245  1.9999999999999999e-63  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.361238  normal 
 
 
-
 
NC_011149  SeAg_B0989  hypothetical protein  28.26 
 
 
737 aa  245  3e-63  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4178  DNA internalization-like competence protein ComEC/Rec2  29.56 
 
 
747 aa  245  3e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.145225  normal  0.646667 
 
 
-
 
NC_010622  Bphy_1443  DNA internalization-related competence protein ComEC/Rec2  27.55 
 
 
843 aa  245  3e-63  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1336  DNA internalization-related competence protein ComEC/Rec2  28.59 
 
 
765 aa  245  3e-63  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.62013 
 
 
-
 
NC_011080  SNSL254_A1016  hypothetical protein  28.44 
 
 
737 aa  243  7e-63  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.619127  normal 
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  26.62 
 
 
835 aa  243  7.999999999999999e-63  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1081  hypothetical protein  28.9 
 
 
737 aa  242  2.9999999999999997e-62  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.30814  normal  0.0474337 
 
 
-
 
NC_007948  Bpro_3158  DNA internalization-related competence protein ComEC/Rec2  28.82 
 
 
860 aa  241  5.999999999999999e-62  Polaromonas sp. JS666  Bacteria  normal  0.0990853  normal  0.446106 
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  27.18 
 
 
766 aa  240  1e-61  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  26.77 
 
 
772 aa  239  2e-61  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  28.59 
 
 
747 aa  239  2e-61  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1048  hypothetical protein  28.12 
 
 
737 aa  238  3e-61  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.486822 
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  28.28 
 
 
778 aa  238  4e-61  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003988  predicted hydrolase of the metallo-beta-lactamase superfamily  28.37 
 
 
752 aa  237  7e-61  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  27.57 
 
 
819 aa  235  3e-60  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_008752  Aave_1352  DNA internalization-related competence protein ComEC/Rec2  27.81 
 
 
948 aa  235  3e-60  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0141053 
 
 
-
 
NC_012912  Dd1591_2310  hypothetical protein  28.83 
 
 
793 aa  234  5e-60  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  26.36 
 
 
851 aa  233  1e-59  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_011313  VSAL_II0736  putative competence-related protein  28.9 
 
 
768 aa  232  2e-59  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  26.23 
 
 
845 aa  232  2e-59  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  27.65 
 
 
825 aa  231  3e-59  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  27.37 
 
 
822 aa  228  3e-58  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2803  DNA internalization-related competence protein ComEC/Rec2  28.1 
 
 
769 aa  227  9e-58  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_1744  DNA internalization-related competence protein ComEC/Rec2  27.54 
 
 
806 aa  225  3e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2129  DNA internalization-related competence protein ComEC/Rec2  26.68 
 
 
829 aa  221  3.9999999999999997e-56  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.326593  normal  0.0900672 
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  26.23 
 
 
878 aa  221  6e-56  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_010717  PXO_00591  DNA internalization-related competence protein ComEC/Rec2  26 
 
 
776 aa  220  7.999999999999999e-56  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0903265  n/a   
 
 
-
 
NC_011138  MADE_01854  DNA internalization-related competence protein ComEC/Rec2  27.34 
 
 
867 aa  219  1e-55  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  28.14 
 
 
861 aa  217  7e-55  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_004578  PSPTO_3848  DNA internalization-related competence protein ComEC/Rec2  27.43 
 
 
738 aa  216  1.9999999999999998e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1432  hypothetical protein  28.09 
 
 
754 aa  211  5e-53  Enterobacter sp. 638  Bacteria  normal  0.0687894  normal 
 
 
-
 
NC_008390  Bamb_2148  DNA internalization-related competence protein ComEC/Rec2  27.7 
 
 
829 aa  208  4e-52  Burkholderia ambifaria AMMD  Bacteria  normal  0.705314  n/a   
 
 
-
 
NC_010551  BamMC406_2021  DNA internalization-related competence protein ComEC/Rec2  27.7 
 
 
833 aa  207  5e-52  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.130557 
 
 
-
 
NC_007510  Bcep18194_A5417  DNA internalization-related competence protein ComEC/Rec2  26.33 
 
 
830 aa  202  1.9999999999999998e-50  Burkholderia sp. 383  Bacteria  normal  0.560238  normal 
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  26.58 
 
 
833 aa  193  1e-47  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012793  GWCH70_2449  DNA internalization-related competence protein ComEC/Rec2  25.04 
 
 
759 aa  181  4e-44  Geobacillus sp. WCH70  Bacteria  normal  0.327807  n/a   
 
 
-
 
NC_003909  BCE_4406  DNA internalization-related competence protein ComEC/Rec2  25.14 
 
 
773 aa  179  2e-43  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3051  DNA internalization-related competence protein ComEC/Rec2  26.84 
 
 
780 aa  177  6e-43  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.755952  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4176  DNA internalization-related competence protein ComEC/Rec2  25.4 
 
 
773 aa  177  8e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1667  DNA internalization-related competence protein ComEC/Rec2  34 
 
 
795 aa  177  9.999999999999999e-43  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4071  DNA internalization-related competence protein  25.34 
 
 
773 aa  174  5.999999999999999e-42  Bacillus cereus E33L  Bacteria  normal  0.499181  n/a   
 
 
-
 
NC_011658  BCAH187_A4458  DNA internalization-related competence protein ComEC/Rec2  24.59 
 
 
773 aa  174  6.999999999999999e-42  Bacillus cereus AH187  Bacteria  hitchhiker  0.00283851  n/a   
 
 
-
 
NC_005957  BT9727_4061  DNA internalization-related competence protein ComEC/Rec2  25.34 
 
 
773 aa  172  2e-41  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  34.89 
 
 
801 aa  171  7e-41  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4347  DNA internalization-related competence protein ComEC/Rec2  26.95 
 
 
654 aa  171  8e-41  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000320337 
 
 
-
 
NC_011772  BCG9842_B0792  DNA internalization-related competence protein ComEC/Rec2  24.74 
 
 
773 aa  170  1e-40  Bacillus cereus G9842  Bacteria  normal  0.92497  hitchhiker  0.0000000434572 
 
 
-
 
NC_008576  Mmc1_0600  DNA internalization-related competence protein ComEC/Rec2  23.95 
 
 
815 aa  170  1e-40  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.404851 
 
 
-
 
NC_009012  Cthe_0606  DNA internalization-related competence protein ComEC/Rec2  24.69 
 
 
778 aa  168  4e-40  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4223  DNA internalization-related competence protein ComEC/Rec2  25.34 
 
 
772 aa  166  2.0000000000000002e-39  Bacillus anthracis str. Sterne  Bacteria  normal  0.396559  n/a   
 
 
-
 
NC_007530  GBAA_4551  DNA internalization-related competence protein ComEC/Rec2  25.34 
 
 
772 aa  166  2.0000000000000002e-39  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.76471  n/a   
 
 
-
 
NC_010320  Teth514_2092  DNA internalization-related competence protein ComEC/Rec2  23.36 
 
 
757 aa  165  4.0000000000000004e-39  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000797686  n/a   
 
 
-
 
NC_011725  BCB4264_A4445  DNA internalization-related competence protein ComEC/Rec2  25.48 
 
 
773 aa  162  2e-38  Bacillus cereus B4264  Bacteria  normal  0.0495736  n/a   
 
 
-
 
NC_010658  SbBS512_E2411  DNA internalization-related competence protein ComEC/Rec2 homolog  35.23 
 
 
343 aa  162  3e-38  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1885  DNA internalization-related competence protein ComEC/Rec2  24.84 
 
 
797 aa  158  4e-37  Geobacter uraniireducens Rf4  Bacteria  normal  0.372915  n/a   
 
 
-
 
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