| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3848 |
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| Symbol | |
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| ID | 1185519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4355091 |
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| End bp | 4357307 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637395199 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | NP_793620 |
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| Protein GI | 28871001 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTCAG GGATGATCGC GCTCGCGTTG GGGCTGGTGG CCCTGCGCTT TCTGCCGGTT
TTGCCGCCGA TCTGGCTCTT GTTGCTAATG CCGATACTGG CGTTGATGCT GCTGCCGTTT
CGCACCTATC CACTGGCGCT GTTCCTGCTC GGCTTCACGT GGGCGTGCGT TTCGGCGCAG
TGGGCGTTGA AAGACCGTTT GCAGCAACGG CTGGACGGCC AGACACTGTG GCTGCAAGGC
AAAGTGGCCG GTTTGCCGAG CGTTGCCGAG GGCGTGGTGC GTTTCGAGCT GGAACACGCC
ACGTCGCGGC GGGCGAAGCT GCCTGCGCTG ATCCGTGTGG CGTGGTACGG CGGCCCTGAG
GTGCGCAGCG GCGAGCGCTG GCGACTGGCG GTAAAGCTCA AGCGCCCCGG CGGGCTGGTC
AACCCTGATG CTTTCGATTA TCAGGCCTGG CTGCTGGCAC AGCGCATCGG CGCGACCGGT
ACGGTGGTGG ACGGTCGAAG GCTGGCGCCC GCGCATGCGG CCTGGCGCGA CGGTATTCGT
CAGCGTTTGC TGGCGGTTGA TGCACAGGGC AGGGAAGGCG GGCTGGCCGC GCTGGTGCTG
GGCGATGGCT CGGGGTTGTC GAGTGGCGAC TGGCAGGTGC TGCAAGACAC CGGCACCGTG
CACCTGCTGG TGATTTCCGG TCAGCATATC GGCTTGCTTG CTGGCGTGAT TTACGCGTTG
GTCGCAGGTC TCGCCCGCTG GGGACTGTGG CCACGGGCTT TGCCCTGGCT GCCCTCGGCC
TGTGCGCTGG CGTTCATTGC TGCGCTGGGC TACGGATTGC TGGCCGGTTT CGAGGTGCCG
GTGCGGCGCG CCTGTGTGAT GGTCGGCATG GTATTGCTGT GGCGTTTGCG CTTTCGGCAT
CTGGGCGTGG TCTGGCCGTT TTTGATTTCC TTCAACGCGG TGCTGATCGT TGAGCCGTTG
GTGACGTTGC AGCCGGGTTT CTGGCTGTCT TTTGCAGCGG TCGGCATTCT GGTACTGATT
TTCAGTGGCC GTCTGGGTAG CTGGAGCTGG TGGCAGAGCT GGACGCGCGC GCAGTGGCTG
ATCGCAATCG GCTTGTTGCC GATTTTGCTG GCGCTGAACC TGCCGATCAG CCTCAGCGGC
CCGTTTGCCA ACCTGCTCGC GGTGCCTTGG GTCAGTGTGA TCGTCCTGCC GCCAGCACTG
ATCGGCACGT TGCTGCTGCC GGTCCCCGTT GTTGGCGAGG GCCTGCTCTG GCTGGCGGGA
GGCGCGCTGC AATGGCTGTT CGTGTTTCTC GGTTGGGTGG CCGAGGCCTT GCCCGCCTGG
CTGCCCAGTG CGGTGCCTGG CTGGGCATGG CTGTTGAGTC TGCTCGGGGC CTTTGTTTTA
TTGCTGCCCA AAGGTGTGCC GCTGCGCCTG TTGGGCTGGC CATTGTTGTT GCTGTGCGTG
TTTCCGCCGC TCAAGTCTGT GCCGATGGGG CAGGTCGAGG TGTTGCAACT GGACGTGGGG
CAGGGGCTGG CGATTCTGCT GCGCACCCGC AATCACACAC TGCTCTACGA TGCAGGGCCG
CGTTTCGGTG AGTTCGATAT CGGCCAACGG GTGGTCGTGC CGGCGATGCG CAAGTCCGGT
GTTCGTCACT TGGATCTGAT GCTGATCAGC CATGCCGATG CGGATCATGC CGGCGGGGCG
GCAGCGGTTC ATCGGGCATT TCCGGTGAAC CGCGTGCTGG GCGGGGAACT GACCCGGCTC
GCCCCGCAAC TCGATGCCCG GCTGTGTGAG AACAACGAGC GCTGGGAATG GGATGGCGTG
GTGTTTTCCA CCTGGCGCTG GGAGCAGGCG CCCAACGGTA ATGCCGGGTC CTGCATGCTG
AGCGTCGACG CCGGTGGTGA GCGTCTGCTG CTGACGGGCG ACATTGATGT GCACGCCGAG
TGTGCGGCAA TGGACAGCGG TTTTGACCTT CGTGCCCACT GGTTGCAGGC TCCGCATCAC
GGCAGCCGCA GTTCATCCTC CAAAGTGTTT CTGCAGGCGG TTGCGCCGCT GGGCGTGCTC
ATTTCCCGCG GGCAGAACAA TGCCTTCGGT CATCCGCATC CGTTGGTCAT GTCGCGGTAC
CGATGGTTGG GAATTACCCA CCATGACAGC GCCGAACTAG GTGCCATCAG TCTGCAACTG
GGGGCGTTCG GCCAGCCTCG GGCGGAGCGG GCTCAGCGGC GTTTCTGGCG TGACTGA
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| Protein sequence | MRSGMIALAL GLVALRFLPV LPPIWLLLLM PILALMLLPF RTYPLALFLL GFTWACVSAQ
WALKDRLQQR LDGQTLWLQG KVAGLPSVAE GVVRFELEHA TSRRAKLPAL IRVAWYGGPE
VRSGERWRLA VKLKRPGGLV NPDAFDYQAW LLAQRIGATG TVVDGRRLAP AHAAWRDGIR
QRLLAVDAQG REGGLAALVL GDGSGLSSGD WQVLQDTGTV HLLVISGQHI GLLAGVIYAL
VAGLARWGLW PRALPWLPSA CALAFIAALG YGLLAGFEVP VRRACVMVGM VLLWRLRFRH
LGVVWPFLIS FNAVLIVEPL VTLQPGFWLS FAAVGILVLI FSGRLGSWSW WQSWTRAQWL
IAIGLLPILL ALNLPISLSG PFANLLAVPW VSVIVLPPAL IGTLLLPVPV VGEGLLWLAG
GALQWLFVFL GWVAEALPAW LPSAVPGWAW LLSLLGAFVL LLPKGVPLRL LGWPLLLLCV
FPPLKSVPMG QVEVLQLDVG QGLAILLRTR NHTLLYDAGP RFGEFDIGQR VVVPAMRKSG
VRHLDLMLIS HADADHAGGA AAVHRAFPVN RVLGGELTRL APQLDARLCE NNERWEWDGV
VFSTWRWEQA PNGNAGSCML SVDAGGERLL LTGDIDVHAE CAAMDSGFDL RAHWLQAPHH
GSRSSSSKVF LQAVAPLGVL ISRGQNNAFG HPHPLVMSRY RWLGITHHDS AELGAISLQL
GAFGQPRAER AQRRFWRD
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