Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1667 |
Symbol | |
ID | 5373454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2012771 |
End bp | 2015158 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640829865 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_001365875 |
Protein GI | 153000194 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGAT TCATGTTTGG CTTTAGTGCC ATCTTGTTAT CAGCGATGTT GTGGCCTTCG CTGCCGCCAG TCAGTTATAT ACCCTACCTT GTTGTTGGGG CGTTAATTTT ATACCGAAAA ATCCCTGTCT GCGCAGGTGG ACTCTTTGCA ATGGCATGGC TAACTGGTTT TTGCTTAGGA TTATCTAGGC AGGATCTTCC AGTGTTACAA CAACCTATAC AGGTTAGGGG CGAAATCATA TCACTAGTTA GTCGAAACAG CGACTGGCTA AGTTTGGATA TATCGGTCAT TAAACCAAAT TTAATCTTAG GGCCAAATGC AAAATTGCGA CTCACGTGGA AAGATCCGCC AGAAGTCGAT GTCGGTCAGG TTTGGCAGTT TACCTTGATG CCTAAGAGTA TTGCTAGCGT GTTAAATCAA GGTGGTTATA ACGAGCAGAA ACAATTAATC AGCCAACATA TTGTCGGTAA AGGGCGAGTG ATAGAGGCGC AGTTACTTGC GTTTTCACCT TCACTGCGTA ACGAGCTGAT AAGCACATTG ACGCCTGAAT TAGTCTCTTT GCCGCAAGGT GATATTCTAC TCGCCTTACT TTTGGGTGAT AAGCAGTTGA TCTCAAAAGT GCGTTGGCAA GCATTACGAC AAACAGGTAC GGGTCATTTA GTGGCGATAT CTGGCTTGCA TCTTTCGGTC ATAGCAGCAT GGATTTACAC ATGCCTTTTG TTTGGCTTAA GTCGCTTAGT GCCACATCAG AGTCGGCGTA ATATCACCCT TGCCTTAGTC GCAGCGGGCA TAGGCGCCGT ATTTTATGCC TATCTTGCTG GCTTTGGCAT TTCGACGCAG CGTGCATTAG TGATGATTCT GCTGTTAATG CTGTTGAGTC TATTAAAGCG CTTTTCTACG GCGTGGGAGC GCTTATTATT CGCCCTGTTC ATTGTATTGC TGCTTGATCC GCTCGCTTGT TTAAGTGCGG GGTTTTGGCT GTCGTTTTGT GCTTTAGGCA TCATCTTATA CACCTTAGAA ATCCAACCAA GGGAATTTAC CCCCGCGTCG ACTCGAAGGG CGCGTTTACG CACAGGGATG ATGCAGTTTT GGGCTATCCA ATGGCGCTTA AGTCTCGGGC TTGGATTATT GCAAGCGGCA CTCTTTGGCG GCGTGAGCGT ACACAGTCTG TGGATGAACA TCTTGGCCGT GCCTTGGTTT AGCTTTGTAG TGATCCCCTT AGCCATGGCG GGATTTGTCT GCTGGTGGCT TGGGACGGCT TTGGGATTAT CTCACTTCGG ACTCTCTTCG CTTGGAGTAT TGCGCCTCAG TGATTGGAGT TTATCGCCCT ATGCGCAGTT GCTCGACATC AGCCAGCAAT TACCCGCCCA TTGGTTAGCA CTCTCTGACA GCTTATTAGC CTTAGGATTC TGCGCGCTCG TTGGTGGTGT GTTATGGCAC TATGTGCCTA AGTATAAACA CTATATTGCT TGGTTAAGCC TATTAAGTTT GTTGTTTATG CCCACATTAC TTTTTTGTAT GACGCTATGG TTTCCCGTTC AAACCCATCG ATGGACCATG CATTTACTCG ATGTGGGCCA AGGTTTAGCC GTGGTGATTG AAAAGAATGG CAAGGGGTTT ATCTATGACA CGGGCGCCGC CTTTGGCGAT GATTTCAGTT ATGCGGAGCG GGTGATATTA CCTTTCCTAA AAGCCAAAGG TATTCAAGAG ATTGACTATA TTGTTATCAG CCATAGCGAT AACGATCATG CAGGCGGCGC GTCTGTCTTG ATAGAGGCTT ATCCTAAGGC TTGGGTGATC ACAGATGTGG CAGGCTTTAG CGGCCAAGAT TGCCGCCCAA GGCAAATTCA ATGGCAAGGG TTGAGCTTTA ACTTACTCTC ACCGCCTCAA GTGCTGGCGG GCAATAATGG CTCCTGTGTG GTACGCATCG ATGATGGCTT GCAAAGTCTG CTACTCACCG GGGACATTGA AAAACAAACC GAAGCGGCAT TATTAAGTCG TGAATTAAGT GTAAGCCGTG AGCTGAGTGT GAGCGGTGAT CTAAGCGTGA ACGGTGATCT AAGTGACTTA AACGAGTTAC AAAGCGACGT GCTAGTGGCG CCGCACCATG GCAGCAAAAC CTCGTCGACA GAGGCCTTTA TCGATGCCGT AGCCCCTAAG TTAGTGCTTT TCCCTGCGGG TTTTGCTAAT CGCTATGGTT TTCCTAAATC CACAGTGGTT GAGCGGTATC AGCGACGAGA GATTAGGAGC CTGACCACAG GGTCAGAAGG GCAGATTAGT GTGATTTTTC AGCAGTCTGA GTTAGAGGTA AAGACCTATC GTGGTGATTT AGCGCCATTT TGGTACAACT CTCTGTTTAG ATTTGGTGAC TTGATTAATC CAGAGTAG
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Protein sequence | MNRFMFGFSA ILLSAMLWPS LPPVSYIPYL VVGALILYRK IPVCAGGLFA MAWLTGFCLG LSRQDLPVLQ QPIQVRGEII SLVSRNSDWL SLDISVIKPN LILGPNAKLR LTWKDPPEVD VGQVWQFTLM PKSIASVLNQ GGYNEQKQLI SQHIVGKGRV IEAQLLAFSP SLRNELISTL TPELVSLPQG DILLALLLGD KQLISKVRWQ ALRQTGTGHL VAISGLHLSV IAAWIYTCLL FGLSRLVPHQ SRRNITLALV AAGIGAVFYA YLAGFGISTQ RALVMILLLM LLSLLKRFST AWERLLFALF IVLLLDPLAC LSAGFWLSFC ALGIILYTLE IQPREFTPAS TRRARLRTGM MQFWAIQWRL SLGLGLLQAA LFGGVSVHSL WMNILAVPWF SFVVIPLAMA GFVCWWLGTA LGLSHFGLSS LGVLRLSDWS LSPYAQLLDI SQQLPAHWLA LSDSLLALGF CALVGGVLWH YVPKYKHYIA WLSLLSLLFM PTLLFCMTLW FPVQTHRWTM HLLDVGQGLA VVIEKNGKGF IYDTGAAFGD DFSYAERVIL PFLKAKGIQE IDYIVISHSD NDHAGGASVL IEAYPKAWVI TDVAGFSGQD CRPRQIQWQG LSFNLLSPPQ VLAGNNGSCV VRIDDGLQSL LLTGDIEKQT EAALLSRELS VSRELSVSGD LSVNGDLSDL NELQSDVLVA PHHGSKTSST EAFIDAVAPK LVLFPAGFAN RYGFPKSTVV ERYQRREIRS LTTGSEGQIS VIFQQSELEV KTYRGDLAPF WYNSLFRFGD LINPE
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