| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2476 |
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| Symbol | |
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| ID | 3960292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2722979 |
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| End bp | 2725279 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637917295 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_523724 |
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| Protein GI | 89901253 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCTAG CCCTCGTGCT GTTTGCTCTA GCAGCTACTA AATATGTAGC AAATAATTCT
CGGACGATAT TGGCCGCGCT GCTTGCTCTG GCCTTTGCCT TGGTGGCTTT TTCCGTGGTG
GGGCTGCGCG CCTCGGCTTA TGCAGAGCAG GCGCTGGACG CCGGTCTGGA AGGGCGCGAC
GTCGCAGTGA GCGGCGTCAT TGCCGCCATG CCGCAGCGCA GCGAGACGGG TTTGCGTTTT
CGCCTGGACG TGGAGTCGGC GCAACAACAG GGGCAGACCG TTCGCCTGCC GTCGCGCCTC
TATCTGGCCT GGTATGCCGA CCGTTTTGCC GGCGGTGATG CAGATCTGGG GGATGAACTG
CAGCGCCAGC CCGCCGCCCT GCAGGCAGGC GAGCGCTGGC AATTCACCGT GCGCCTGAAG
GCACCGCATG GCGCCAGCAA CCCCTTTGGC TATGACTTCG AGCTCTGGCT GTGGGAGCAG
GGCTTGCAGG CCACCGGCTA TGTGCGCGCC GGGCCCAAAG ACCCGGCGCC GCAGCGGCTG
ATTCAGACGT ATCGGCATCC GGTGGAACTG GCTCGCCAAC TGGTGCGCGA GCAGATAGTT
GGGCAGGTAG AGGATCGCAA ATATGCCGGA CTGATCGCCG CCCTGGTGGT GGGCGACCAA
AACGCCATCG ACCGCGCGGA CTGGGATGTT TTTCGGGCCA CCGGCGTGGC GCACCTGATG
AGTATTTCAG GCTTGCACGT GACCATGTTT GCCTGGCTCG CCACGCTGGT GGTGGGCTGG
TTGTGGCGGC GCTCCAGTCG GCTGTGCCTG TGGCTGCCGG CGCCCAGCGC TGCCCTGGTC
GGCGGCGTGT TGCTGGCGGC GGCCTATGCC CTGTTCAGCG GCTGGGGCGT GCCCTCGCAG
CGCACCGTGC TGATGCTCGC GACCGTGGGT TTGCTGCGCC TGAGCGGCAA GCGTTGGCCC
TGGCCGCATG TCTGGCTGCT GACCTGCGCG GTGGTGGTGG CCGTGGACCC GTGGGCGCTG
TTGCAGGCCG GGTTCTGGCT CAGCTTTGTT GCCGTGGGCA TCCTATTTGC TTCTGATTCA
GGAGCTGATT ACGAAGAAAG GACGGGGGCT AGAGGCCGAT TAGTCTCCAT GTTTCGGGAG
CAGGCGGTGA TCACACTGGC GCTGACGCCC TTGACGCTGC TGCTGTTTGG GCAGGTCTCG
GTGGTGGGGC TGGCGGCCAA TGCGCTGGCT ATTCCCTGGG TCACGCTGGT GGTGACGCCG
CTGGCGATGG CGGGTGTGGC GGTGGCGCCG CTGTGGGATG TGGCGGCGTG GGCCATTGCC
GCCTTGACCT GGTATCTGCA AATGTTGGCG GCCTTGTCCT TTGCAACGAT CACCGTGGCG
CAAGCGCCGC TGTGGGCAGG CGTGGCCGGT GTCATCGGCG GCGCCGTGCT GGTCATGCAG
TTGCCCTGGA GTCTGCGACT GCTGGGCCTG CCCTTGATGC TGCCGGTGTT ACTGTGGCAG
GCGCCGCGCC CCCCAGAAGG CCAGTTTGAG CTGCTGGCCG CCGACATCGG GCAGGGCAAT
GCCGTGCTGG TGCGCACCGC CCACCATGCC TTGCTGTATG ACGCCGGGCC GCGCTTCAGC
CGTGAGAGTG ATGCGGGTCA CCGCGTGCTG GTGCCTCTCT TACGCGCACT CGATGTGCGA
CTCGATACCT TGCTGCTGAG TCACCGCGAC AGCGACCACA CCGGTGGCGC GCTGGCGCTG
TTGGCGATGC AGCCGCAGGC GACGGTGCTC AGTTCGATTG AGGACACGCA CGAGTTGCAG
GCGGTGCACC CGGTTACGCG TTGCGCGGCC GGGCAGCGCT GGCGTTGGGA CGGTGTTGAT
TTTGAAGTGT TGCACCCGCA AGCCGCTGAC TACGGCGCGG TGCGCAAGAG TAACGCCATG
AGCTGCGTGC TGCGCCTGTC CAATGGCGTC CAGTCGGCGC TGCTGGTGGG TGATATTGAG
CAGGCGCAGG AAGCCCGGCT TGTGAGCGAG GGGGGCAATC TGAGGTCCGA TGTGTTGCTG
GTACCGCATC ACGGCAGTAG ATTCTCCAGC AGCGCGGCGT TTCTGGACGC TGTGCAGCCG
CGGACTGCGC TGGTGCAAGC CGGTTACCGC AACCGCTTTG GCCACCCGGC GGAGTCTGTT
TTGGTGCGCT ACCAGGAGCG TCACATTCAG GTGATCGATT CGCCCCATTG TGGTGCTGCG
ACCTGGCAAT CGGCCCTGCC GCAAGAGCTG CGATGCCAGC GATCAGATGG CTTGCGCTAT
TGGCAGCATC GTCTACTGTA A
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| Protein sequence | MLLALVLFAL AATKYVANNS RTILAALLAL AFALVAFSVV GLRASAYAEQ ALDAGLEGRD
VAVSGVIAAM PQRSETGLRF RLDVESAQQQ GQTVRLPSRL YLAWYADRFA GGDADLGDEL
QRQPAALQAG ERWQFTVRLK APHGASNPFG YDFELWLWEQ GLQATGYVRA GPKDPAPQRL
IQTYRHPVEL ARQLVREQIV GQVEDRKYAG LIAALVVGDQ NAIDRADWDV FRATGVAHLM
SISGLHVTMF AWLATLVVGW LWRRSSRLCL WLPAPSAALV GGVLLAAAYA LFSGWGVPSQ
RTVLMLATVG LLRLSGKRWP WPHVWLLTCA VVVAVDPWAL LQAGFWLSFV AVGILFASDS
GADYEERTGA RGRLVSMFRE QAVITLALTP LTLLLFGQVS VVGLAANALA IPWVTLVVTP
LAMAGVAVAP LWDVAAWAIA ALTWYLQMLA ALSFATITVA QAPLWAGVAG VIGGAVLVMQ
LPWSLRLLGL PLMLPVLLWQ APRPPEGQFE LLAADIGQGN AVLVRTAHHA LLYDAGPRFS
RESDAGHRVL VPLLRALDVR LDTLLLSHRD SDHTGGALAL LAMQPQATVL SSIEDTHELQ
AVHPVTRCAA GQRWRWDGVD FEVLHPQAAD YGAVRKSNAM SCVLRLSNGV QSALLVGDIE
QAQEARLVSE GGNLRSDVLL VPHHGSRFSS SAAFLDAVQP RTALVQAGYR NRFGHPAESV
LVRYQERHIQ VIDSPHCGAA TWQSALPQEL RCQRSDGLRY WQHRLL
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