Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1429 |
Symbol | |
ID | 8534586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1540172 |
End bp | 1542694 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646383820 |
Product | DNA internalization-related competence protein ComEC/Rec2 |
Protein accession | YP_003263309 |
Protein GI | 261856026 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein [TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTGCA CGCTTGTTCG AAATCGATAC TTCTCGACAC GATTGAGTTC ACTGTGGTTG CTGGCGTGGT CTGTTGGCGC ACTGGGTGCC TGGCTGCTGC CTTGGGCGCC ATTGAAAGCG GCAAGTGATC AGCCCAAGCC TCTGATCTGG CTGACGTCGC TCATCTCCAA AGTTTTACAT GCCAACCTGT TGGCCGATGA CCTGTTGCGC CCATTGGTGG CCTTTTGGGT TCTGGTTTTG TTGATTCTTT TGATTCTGCG TTTACAGCAA TCGGCGACTA TTGCCCGTTT CTGGACCATT GCCGTGCCTG CTTTAGCGGT GTTCAGTGGT TTGTTGTGGT CTTTATCCGC CATCAGTACG TTTGTGCGGT CGTTGCCGCC GTCATCGCTT GCGCCCGTAT CCTGCTCTGT GACGGCCATG ATCGATGCCT TGCCGCGTCC ATCAAAGCAC GCGACCCAGT TGATGTTGCG CGTTGTACAA GTTGATAGAA ACCAAAGCGA TGCGGCTTGC CGATTTTATT CAACCGGCCA GCGATTGCGT GTGGGTGATT ATCATCGTTA TCCGCCCAAT GAACAGGTTG AGTATCACGG TGGGGCGGTC TGGCGATTTG ATCTGCGCTT GAAACCACCT CATGGCAGCG CAAACCCTGG CGGGTTCGAC TACGAGCGCT GGTTGTTTTC CCAGCGTATC GCGGCAACGG GATCGGTTCA TGGCAAGCCT ACACTGTTGG CCGAGAGAGG CGATGGATTT GCAGCCTACC TGTTATCGGT TCGCTCGCAC TGGCGCGCGC AGTTGCTGGC TATATCCCAA TCACAAGGCA CACCGGACCG AGGGCGAGGC TTACTGCTGG GTTTGACCAT CGGGGATAGT GATTATCTGG GTCAAAACGA CTGGGAAACG CTGCTGGCTA CTGGCACGAA TCATCTGCTG GCTATTTCGG GTTTGCATGT GGGTATGGTT TCCGGGTTGT TCGCTTGGCT CGCGGCCTGG CTTTGGTCGC GCACGCGCTG GTGCGAAGGG TTTCCCGCTC GTCGTGTGGC CGCCGGGGTG GCCGTTTTTG CGGCTTGGGG CTACGCCTTT CTGGCGGGGA TGTCTGTACC GACCGAACGC ACGGCACTGA TGATCACGAT TTTGTTGGCG GGCTTGCTGC TGGGGCGGTC GTGGCGATTG CTCGATCTCT GGCTGATCGC TCTGGTGGGT GTGCTCTTGC TTGATCCGTT CAATGCGCTC ACGGCGGGGT TCTGGCTCTC CTTTGGTGCG GTGTTGATCA TGCTGCTCTG GTTGCAGTAC CGCCCCGCGC TCGCGTTCTG GCGCGATGGA TTCCGCCTGC AGATCATTAT CACGCTCGCC TTGCTGCCTA TCGTCTGGTG GCTGTTCGAC CGTGTGGCCT GGTCGTCCTT ACCCGCCAAT ATCTTGGCTG TGCCGGTGAT TACTTTTGTA ATTACGCCGC TTTCCCTGCT GGTCATGGCG TTCGTCAGTA TGTTGCCTTC GGTTGCGGCA GTCCTGATGT GGCCGATCAA CGTCCTGACA CATGGCTTGT TCGGCTTTCT TGAGTGGTTG CGGTTGACGC TGCCAGATAG CCACATCGCC GCCCCCGCTG GATGGACGCT GTTGCTGGCC TCGCTTGGTG TGGCCTGGAT GTTGATGCCT AAATTCTGGC CTGCCCGATA TCTTGGCCTC GTGCTGTGTT TGCCCGCGGT ATTCTATCGA CCGGCACCGA TTCCGGATGG CGAGGCCGAT ATCTGGTTTC TGGATGTGGG GCAGGGGTTG GCTGTGGTTA TCCATACCGC GCGCCACGCG ATGCTGTACG ACGCGGGGCC GGCATTCGGT GGCAGTGACG CGGGCGAGCG AACGGTTGTG CCTGCGTTGC GCGCACTGCA TGTCTCGGAG CTGAATCAAA TCGTCATCAG TCACCATGCG CGCGACCATA TGGGTGGATT GTCCAGCGTG CTGACGGTTT ATCCTCATGT TCCGGTAATC AGTGGGGAGC CGCTGCCGGG CTTCGGTAGC ACATCTTGTC GTGATGGAGC GCATTGGCAG TGGGATGGGG TGGATTTTGC AACCTATCAG GCTTCACTGG ACAGTCGTAG CGATAACAAT CGTTCCTGTG TGCTTGTCAT CCAGAGTCGT GCCGGAAGCG TCTTGTTGAC CGGCGATATC GAAGCTGAGG CAGAGCAAGC GCTCATTGAT GCGCACTCAG GTGGCACTGC GTTGAAATCA GATGTGCTCT ATGTGCCGCA TCATGGCTCG AAAACCTCAT CTTCGCCGCC ATTCCTGGCT GCGGTTCAGC CAGAAGTGGC TGTGATCAGT GCCGGTAAGT TCAACTCCTT CGGGCATCCG CATCCCTTGG TGCTGCAACG CTATCGGCAG CGACAAATTC CAGTGTTCAA CACCGCTGAT CAGGGCGCGA TCGAAGTGAA ATCCGGGCAG GTTATCGCCT ACCGCGACCG CCAATGGCCA TTTGTCTGGC GGTGTATTAG GGAACCTCTG ATTGAATCCT TCGTGGCCGA GACGGGCTTT TGA
|
Protein sequence | MSCTLVRNRY FSTRLSSLWL LAWSVGALGA WLLPWAPLKA ASDQPKPLIW LTSLISKVLH ANLLADDLLR PLVAFWVLVL LILLILRLQQ SATIARFWTI AVPALAVFSG LLWSLSAIST FVRSLPPSSL APVSCSVTAM IDALPRPSKH ATQLMLRVVQ VDRNQSDAAC RFYSTGQRLR VGDYHRYPPN EQVEYHGGAV WRFDLRLKPP HGSANPGGFD YERWLFSQRI AATGSVHGKP TLLAERGDGF AAYLLSVRSH WRAQLLAISQ SQGTPDRGRG LLLGLTIGDS DYLGQNDWET LLATGTNHLL AISGLHVGMV SGLFAWLAAW LWSRTRWCEG FPARRVAAGV AVFAAWGYAF LAGMSVPTER TALMITILLA GLLLGRSWRL LDLWLIALVG VLLLDPFNAL TAGFWLSFGA VLIMLLWLQY RPALAFWRDG FRLQIIITLA LLPIVWWLFD RVAWSSLPAN ILAVPVITFV ITPLSLLVMA FVSMLPSVAA VLMWPINVLT HGLFGFLEWL RLTLPDSHIA APAGWTLLLA SLGVAWMLMP KFWPARYLGL VLCLPAVFYR PAPIPDGEAD IWFLDVGQGL AVVIHTARHA MLYDAGPAFG GSDAGERTVV PALRALHVSE LNQIVISHHA RDHMGGLSSV LTVYPHVPVI SGEPLPGFGS TSCRDGAHWQ WDGVDFATYQ ASLDSRSDNN RSCVLVIQSR AGSVLLTGDI EAEAEQALID AHSGGTALKS DVLYVPHHGS KTSSSPPFLA AVQPEVAVIS AGKFNSFGHP HPLVLQRYRQ RQIPVFNTAD QGAIEVKSGQ VIAYRDRQWP FVWRCIREPL IESFVAETGF
|
| |