| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1120 |
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| Symbol | |
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| ID | 1219935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1176593 |
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| End bp | 1179136 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637237489 |
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| Product | putative transporter DNA uptake transmembrane protein |
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| Protein accession | NP_519241 |
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| Protein GI | 17545839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0978754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.511509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCC TGCTGATCGG CTTCGTCGCA GGGTGCATGG CGCTGCAGAC GCGGCCGGCG
CTGGCGCCGG TGTGGCAGCC GGCGCTGCTT GGGCTTGCTT GCCTGCTGGC GATGGCGTTG
CTGCGGCGCG GCGCTCGGTT GCCCAGGCTC GTTCCCGTGA TGGCAGTGCT GGCGGCGGCC
TGCGCCGGCT TCGGCTGGAG CGATTGGCGC GCGCAGCAGC GCTTGTCCGT GGTGCTGGCG
CCCGCATGGG AGGGCAAGGA CATCCGCGCG ACGGGCGTCG TGGCCGAGCT GCCCGAAGTC
ACCGAGGACG CCACGCGCTT CCTGTTCCGG ATTGAATCCA GCGACGCGGG CGATGCCGTA
CCGCCGCGCG TGCGGCTGTC GTGGTACGGC CTGCGCAGCT GGCATGAGCG GCAGCGGGAG
GCGGAGGCCG CCACCGATCG CCGCGCCGGC ATTCCCGATC TGCAGCCCGG CCAGCGCTGG
CAGCTGACGC TGCGGCTCAA GCGGCCGCAC AGCCTGATGA ATCCCGGCGG CTTCGATGGC
GAATACGCGA TGCTTGCCGA CGATGTCCGT GCCGCGGGCT ACGTGTACAC GGGCAAACGC
GCGCGCAATG CGTTGATGGG CGAAGCCGAT GCCGGTTCCG GTGTTGGGCT CCGTGTCGAG
CGCTGGCGCG CCGCGGTGCG GCGGCATCTC CTGGCTGCGC TGCCCGAGGC ACGCTACGCG
CCGGTGATCG TCGCCCTGGT GGTGGGCGAC CAGAGCGGCA TCGCGCAGGC GGATTGGGAG
CGCTTCCGCC GCACCGGCAT CAGCCATCTC GTCAGCATTT CCGGTCTGCA CATCACGATG
ATCGCCGGGC TGTTCGGCGC GCTGTGGATG GCGCTGTGGC GGCGCTCGTT CGGCCTGGCC
CGCTGGCTGC GCACACCGCT GCCGCTGCGC ATGCCGGCCC AGCGTGCGGG CGCCGTCGCC
GCCATGGCGG CGGCGTTTGC CTATTGCCTG CTGGCGGGGA TGGGCGTGCC GGCGCAGCGC
ACGCTGCTGA TGCTCGCGAC CGTTGCCGTG GCGCGGCTGG CCGATCGCAG CGTGCCGGTC
AGCCTGTCGC TGTGCTGGGC GGCGGCCTTG GTGGCGCTGG TGGATCCGTG GGCGGTCATG
TCGGCGGGAG GCTGGCTGTC GTTCGGCGCC GTGGCGGTCA TCTTCCTGGC CGCGCGGATC
GTTGCCGCCG ATGCGCGGGA CGACGTCCGC CGGCCCGCCT GGCCGGTGCG CGCCTGGCGC
GGCCTGCGCG GCGCCGCGCG CGTCCAGCTG GCCGTGACGT TCGGCCTGCT GCCGTTGACC
TTGCTGCTGT TCCAGCAGGT CTCGGTGGTG TCGGCCGTGG CCAACGCGCT GGCGATCCCG
GTGGTCAGCT TTGTCACGAC GCCGCTGGCG CTGATGGGCA CGGCGTTGCC CGAGCCATGG
TCGCAGCCGG TGCTGATATG GGCCGAGGCC AGCTTCGCCT GGCTCATGCC GTGGCTGGAT
GCGCTGGCGC TGCCCGGCGG GTCGGTGTGG GTGGCGCCCG CCGCGCCGGC CTGGGCCTGG
GGGCTGGCGG TGGTCGGTGT GCCGTTGCTG CTCGTGCCGG GTGGGTATCG CGCCTGGGCC
TGGCGGGCGC AGGGCGCGGT GCTGCTGCTG CCGATGCTGC TGGCACGCGC ACCGGCGCCG
CCGCCGGGCG AGTTCCGCAT GGTCGCATTC GACATCGGCC AGGGCGCCGC CACGCTGGTC
GAGACGGCCG GCCACCGGCT GCTGTTCGAT ACCGGTCCCC GCCAAGGCGA CCTGGCCGAT
GCCGCCGATC GCGTGATCGT CCCGTATCTG CGCGGACATG GGGTGCAGGC CATCGACACG
CTGGTGGTCA GCCATGAGGA TAGCGATCAC GCCGGCGGCA CCGAAACGGT GATGGCCGGT
GTGCCGGTGC GCACCATGCT GGCGTCCCTG CCGCCCGGCC ACGGGCTGGA GCGGCAGGCC
CGCGCGCTCG GCATCGAGCC CGCAGGCTGC GTGGCCGGGC AGCGCTGGGC ATGGGACGGC
GTCGCCTTCG AAATCCTGTA TCCGGTGCAG GTGCCCTCCG ATCGGGCGGC CGTGTCCAGC
AATGCCCGCA GCTGTGTGCT GCGCATCGCC AACGCGCGCT ACGCCGCCAT GCTGGCCGGC
GACATCGGCC GCGCCCAGGA AGCGGCGCTG ATTGCCGCCG AAGCGCCGGA GCGGCTCATG
GCAGATATCT TGCTTGTGCC CCATCACGGC AGCAGGACGA GCTCCAGCGG CGCGTTCCTG
GACGCGGTCT CTGCGCAGGT GGCGGTGTTC CAGGTCGGCT ACCGCAACCG GTACGGTCAT
CCGCATCCGC AGGTCTGGCA GCGCTACGGC GCGCGCGGCA TCGAGCGGCT GCGCACCGAT
GCCACCGGGG CCGTCGTCAT CGAGACGCGC GGCGATGCGC TGGCGGTGCG GACGGCGCGG
TCGATGCGGC CGCGCTACTG GTCCTCGGCG CTGGAGGTGG CCGCCCTGGC AGAGACCACG
GAGCCCACGG GCGCGCAGCC GTAA
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| Protein sequence | MRALLIGFVA GCMALQTRPA LAPVWQPALL GLACLLAMAL LRRGARLPRL VPVMAVLAAA
CAGFGWSDWR AQQRLSVVLA PAWEGKDIRA TGVVAELPEV TEDATRFLFR IESSDAGDAV
PPRVRLSWYG LRSWHERQRE AEAATDRRAG IPDLQPGQRW QLTLRLKRPH SLMNPGGFDG
EYAMLADDVR AAGYVYTGKR ARNALMGEAD AGSGVGLRVE RWRAAVRRHL LAALPEARYA
PVIVALVVGD QSGIAQADWE RFRRTGISHL VSISGLHITM IAGLFGALWM ALWRRSFGLA
RWLRTPLPLR MPAQRAGAVA AMAAAFAYCL LAGMGVPAQR TLLMLATVAV ARLADRSVPV
SLSLCWAAAL VALVDPWAVM SAGGWLSFGA VAVIFLAARI VAADARDDVR RPAWPVRAWR
GLRGAARVQL AVTFGLLPLT LLLFQQVSVV SAVANALAIP VVSFVTTPLA LMGTALPEPW
SQPVLIWAEA SFAWLMPWLD ALALPGGSVW VAPAAPAWAW GLAVVGVPLL LVPGGYRAWA
WRAQGAVLLL PMLLARAPAP PPGEFRMVAF DIGQGAATLV ETAGHRLLFD TGPRQGDLAD
AADRVIVPYL RGHGVQAIDT LVVSHEDSDH AGGTETVMAG VPVRTMLASL PPGHGLERQA
RALGIEPAGC VAGQRWAWDG VAFEILYPVQ VPSDRAAVSS NARSCVLRIA NARYAAMLAG
DIGRAQEAAL IAAEAPERLM ADILLVPHHG SRTSSSGAFL DAVSAQVAVF QVGYRNRYGH
PHPQVWQRYG ARGIERLRTD ATGAVVIETR GDALAVRTAR SMRPRYWSSA LEVAALAETT
EPTGAQP
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