More than 300 homologs were found in PanDaTox collection
for query gene Xcel_1838 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_1838  transcriptional regulator, Crp/Fnr family  100 
 
 
225 aa  434  1e-121  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0983527  n/a   
 
 
-
 
NC_013174  Jden_0916  transcriptional regulator, Crp/Fnr family  46.01 
 
 
242 aa  166  2.9999999999999998e-40  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_20120  cAMP-binding protein  42.92 
 
 
223 aa  153  2e-36  Kytococcus sedentarius DSM 20547  Bacteria  hitchhiker  0.00290987  normal  0.0142715 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  32.21 
 
 
234 aa  149  3e-35  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_09560  cAMP-binding protein  44.13 
 
 
231 aa  140  9.999999999999999e-33  Micrococcus luteus NCTC 2665  Bacteria  normal  0.348668  n/a   
 
 
-
 
NC_008528  OEOE_0355  Crp-like transcriptional regulator  32.24 
 
 
221 aa  125  6e-28  Oenococcus oeni PSU-1  Bacteria  normal  0.128458  n/a   
 
 
-
 
NC_008699  Noca_1619  cyclic nucleotide-binding  39.45 
 
 
235 aa  123  3e-27  Nocardioides sp. JS614  Bacteria  normal  0.146026  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.61 
 
 
236 aa  122  6e-27  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  26.61 
 
 
236 aa  120  1.9999999999999998e-26  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  29.3 
 
 
230 aa  120  1.9999999999999998e-26  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_1250  Crp/FNR family transcriptional regulator  26.94 
 
 
236 aa  112  3e-24  Clostridium perfringens ATCC 13124  Bacteria  normal  0.403908  n/a   
 
 
-
 
NC_008527  LACR_1045  Crp-like transcriptional regulator  32.71 
 
 
229 aa  112  5e-24  Lactococcus lactis subsp. cremoris SK11  Bacteria  decreased coverage  0.000241394  n/a   
 
 
-
 
NC_008262  CPR_1062  Crp/FNR family transcriptional regulator  26.94 
 
 
236 aa  112  6e-24  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_2066  Crp/FNR family transcriptional regulator  28.64 
 
 
224 aa  111  9e-24  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.0111986  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  24.65 
 
 
236 aa  107  1e-22  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  36.02 
 
 
226 aa  107  2e-22  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  24.65 
 
 
236 aa  107  2e-22  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_013174  Jden_1939  transcriptional regulator, Crp/Fnr family  36.15 
 
 
235 aa  105  8e-22  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  32.59 
 
 
226 aa  103  2e-21  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  25 
 
 
232 aa  103  3e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  33.65 
 
 
236 aa  103  3e-21  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  25.59 
 
 
239 aa  101  8e-21  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  32.74 
 
 
225 aa  97.4  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  34.56 
 
 
225 aa  97.1  2e-19  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  33.65 
 
 
248 aa  97.4  2e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  31.9 
 
 
228 aa  96.7  3e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  32.89 
 
 
225 aa  93.6  2e-18  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  33.98 
 
 
254 aa  92.4  5e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  31.43 
 
 
231 aa  91.3  1e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  29.27 
 
 
231 aa  90.9  1e-17  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  28.37 
 
 
227 aa  90.9  1e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  34.86 
 
 
220 aa  90.9  1e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  32.16 
 
 
225 aa  90.9  2e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  31.39 
 
 
228 aa  90.1  2e-17  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0984  Crp-like transcriptional regulator  27.36 
 
 
209 aa  90.5  2e-17  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  35.55 
 
 
228 aa  90.1  3e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  32.09 
 
 
228 aa  88.6  7e-17  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  31.8 
 
 
225 aa  88.2  9e-17  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  28.64 
 
 
227 aa  87.8  1e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  32.09 
 
 
225 aa  88.2  1e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  29.6 
 
 
226 aa  87.8  1e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  32.98 
 
 
225 aa  88.2  1e-16  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  32.57 
 
 
242 aa  87.4  2e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  31.39 
 
 
226 aa  87.4  2e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  27.67 
 
 
226 aa  86.7  3e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  29.72 
 
 
227 aa  86.3  3e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  32.99 
 
 
225 aa  85.9  4e-16  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  32.04 
 
 
224 aa  85.5  5e-16  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  29.25 
 
 
227 aa  85.9  5e-16  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  31.6 
 
 
241 aa  85.5  6e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  28.7 
 
 
226 aa  85.1  8e-16  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  27.81 
 
 
236 aa  84.7  0.000000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  30.66 
 
 
229 aa  84.7  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  29.53 
 
 
247 aa  83.2  0.000000000000003  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  31.82 
 
 
261 aa  83.2  0.000000000000003  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_009513  Lreu_1425  CRP/FNR family transcriptional regulator  27.55 
 
 
212 aa  82.4  0.000000000000006  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  29.17 
 
 
228 aa  82  0.000000000000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  30.19 
 
 
230 aa  81.6  0.000000000000008  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  28.83 
 
 
224 aa  81.3  0.00000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  28.84 
 
 
226 aa  81.6  0.00000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  32.09 
 
 
249 aa  81.3  0.00000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  35.21 
 
 
237 aa  80.1  0.00000000000002  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  28.5 
 
 
229 aa  80.5  0.00000000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  31.55 
 
 
229 aa  80.1  0.00000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  29.49 
 
 
231 aa  79.7  0.00000000000003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_1007  CRP/FNR family transcriptional regulator  30.41 
 
 
164 aa  79.7  0.00000000000003  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1971  transcriptional regulator  27.49 
 
 
237 aa  79.7  0.00000000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.644199 
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  27.69 
 
 
225 aa  79  0.00000000000005  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  24.76 
 
 
219 aa  78.6  0.00000000000008  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  27.23 
 
 
222 aa  78.6  0.00000000000008  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  26.53 
 
 
220 aa  78.2  0.00000000000009  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  27.91 
 
 
234 aa  78.2  0.00000000000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_008530  LGAS_1887  FNR/CRP family transcriptional regulator  29.94 
 
 
216 aa  78.2  0.00000000000009  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.000000000000504679 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  27.8 
 
 
225 aa  78.2  0.0000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  29.7 
 
 
224 aa  77.8  0.0000000000001  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  29.03 
 
 
234 aa  77.8  0.0000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  30.91 
 
 
240 aa  77.8  0.0000000000001  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  29.59 
 
 
223 aa  77.8  0.0000000000001  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  30.24 
 
 
236 aa  78.2  0.0000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  29.28 
 
 
224 aa  77.8  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  29.86 
 
 
224 aa  77  0.0000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  29.06 
 
 
232 aa  76.6  0.0000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1631  cyclic nucleotide-binding protein  28.64 
 
 
257 aa  76.3  0.0000000000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  28.5 
 
 
222 aa  75.9  0.0000000000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  28.85 
 
 
254 aa  75.5  0.0000000000006  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  24.3 
 
 
227 aa  75.1  0.0000000000007  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  27.57 
 
 
225 aa  75.5  0.0000000000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_003296  RS02297  transcription regulator protein  31.03 
 
 
225 aa  75.1  0.0000000000008  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_010172  Mext_1357  cyclic nucleotide-binding  32.42 
 
 
250 aa  75.1  0.0000000000009  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.395788 
 
 
-
 
NC_009767  Rcas_3897  Crp/FNR family transcriptional regulator  27.01 
 
 
227 aa  75.1  0.0000000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280734  normal  0.887061 
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  27.88 
 
 
254 aa  74.7  0.0000000000009  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_011989  Avi_3466  regulator of Biofilm formation Fnr Family  29.13 
 
 
235 aa  74.7  0.0000000000009  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  29.73 
 
 
224 aa  74.3  0.000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  30.56 
 
 
239 aa  74.3  0.000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0787  transcriptional regulator, Crp/Fnr family  29.13 
 
 
243 aa  74.7  0.000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1454  Crp/FNR family transcriptional regulator  26.69 
 
 
252 aa  74.7  0.000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  30.18 
 
 
236 aa  74.7  0.000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  31.67 
 
 
225 aa  74.3  0.000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_007974  Rmet_4521  Crp/Fnr family transcriptional regulator  27.36 
 
 
257 aa  73.9  0.000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.0161618  normal  0.0108643 
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  27.78 
 
 
232 aa  73.9  0.000000000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
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