More than 300 homologs were found in PanDaTox collection
for query gene Tmz1t_4014 on replicon NC_011662
Organism: Thauera sp. MZ1T



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011662  Tmz1t_4014  transcriptional regulator, Crp/Fnr family  100 
 
 
233 aa  471  1e-132  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  35.68 
 
 
227 aa  115  6e-25  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1669  Crp/FNR family transcriptional regulator  31.71 
 
 
233 aa  112  4.0000000000000004e-24  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  32.38 
 
 
231 aa  107  1e-22  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  34.78 
 
 
253 aa  103  2e-21  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  30.19 
 
 
234 aa  99.8  3e-20  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  31.86 
 
 
229 aa  98.2  8e-20  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  31.86 
 
 
229 aa  98.2  8e-20  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  31.86 
 
 
229 aa  98.2  8e-20  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02297  transcription regulator protein  32.06 
 
 
225 aa  97.8  1e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  31.86 
 
 
230 aa  98.2  1e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  31.86 
 
 
230 aa  98.2  1e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_007298  Daro_1036  cyclic nucleotide-binding  31.55 
 
 
245 aa  97.8  1e-19  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  31.86 
 
 
229 aa  98.2  1e-19  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  31.86 
 
 
230 aa  98.2  1e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  31.86 
 
 
230 aa  98.2  1e-19  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  32.02 
 
 
229 aa  96.7  3e-19  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  33.16 
 
 
224 aa  94.7  9e-19  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  31.75 
 
 
243 aa  94.7  1e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1454  Crp/FNR family transcriptional regulator  28.32 
 
 
252 aa  92.4  5e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011992  Dtpsy_1709  transcriptional regulator, Crp/Fnr family  30.13 
 
 
254 aa  92  7e-18  Acidovorax ebreus TPSY  Bacteria  normal  0.0525745  n/a   
 
 
-
 
NC_008782  Ajs_1904  CRP/FNR family transcriptional regulator  30.13 
 
 
254 aa  92  7e-18  Acidovorax sp. JS42  Bacteria  normal  0.0603838  normal  0.510939 
 
 
-
 
NC_009952  Dshi_3191  transcriptional regulator Dnr  30.3 
 
 
227 aa  91.3  1e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2109  transcriptional regulator, Crp/Fnr family  32.79 
 
 
225 aa  88.6  8e-17  Ralstonia pickettii 12J  Bacteria  normal  0.170093  normal 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  36.36 
 
 
248 aa  87.8  1e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  32.37 
 
 
225 aa  87.8  1e-16  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  32.37 
 
 
225 aa  87.8  1e-16  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  31.73 
 
 
232 aa  86.7  3e-16  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_007958  RPD_1522  cyclic nucleotide-binding  28.57 
 
 
241 aa  86.7  3e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.500349  normal  0.967279 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  30.61 
 
 
229 aa  86.3  4e-16  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  30.73 
 
 
246 aa  86.3  4e-16  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  33.64 
 
 
227 aa  85.1  7e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  34 
 
 
237 aa  85.1  8e-16  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_011662  Tmz1t_2638  transcriptional regulator, Crp/Fnr family  32.09 
 
 
222 aa  85.1  8e-16  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_06870  transcriptional regulator Dnr  28.84 
 
 
227 aa  84.3  0.000000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.156456  normal 
 
 
-
 
NC_009952  Dshi_3189  transcriptional regulator  29.94 
 
 
236 aa  84  0.000000000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  31.11 
 
 
236 aa  84  0.000000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1785  transcriptional regulator, Crp/Fnr family  32.24 
 
 
225 aa  84  0.000000000000002  Ralstonia pickettii 12D  Bacteria  normal  0.0232074  normal  0.813169 
 
 
-
 
NC_011126  HY04AAS1_0349  transcriptional regulator, Crp/Fnr family  28.34 
 
 
219 aa  83.2  0.000000000000003  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000181532  n/a   
 
 
-
 
NC_009656  PSPA7_0628  transcriptional regulator Dnr  28.37 
 
 
227 aa  82.8  0.000000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2478  CRP/FNR family transcriptional regulator  29.03 
 
 
249 aa  82  0.000000000000006  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.651433 
 
 
-
 
NC_011004  Rpal_0740  transcriptional regulator, Crp/Fnr family  28.57 
 
 
255 aa  82  0.000000000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  32.79 
 
 
254 aa  81.6  0.00000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  29.95 
 
 
231 aa  80.9  0.00000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007925  RPC_1012  Crp/FNR family transcriptional regulator  29.08 
 
 
241 aa  81.6  0.00000000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.88102  normal  0.736744 
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  32.46 
 
 
233 aa  80.9  0.00000000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  31.68 
 
 
226 aa  78.2  0.0000000000001  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_009719  Plav_2608  CRP/FNR family transcriptional regulator  27.48 
 
 
239 aa  77  0.0000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.700213  normal  0.0258786 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  28.43 
 
 
225 aa  77.4  0.0000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  30.14 
 
 
227 aa  77.4  0.0000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  24.38 
 
 
234 aa  77.4  0.0000000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1619  cyclic nucleotide-binding  34.62 
 
 
235 aa  76.6  0.0000000000003  Nocardioides sp. JS614  Bacteria  normal  0.146026  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  29.52 
 
 
231 aa  76.3  0.0000000000004  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  29.61 
 
 
222 aa  76.3  0.0000000000004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  28.57 
 
 
352 aa  75.9  0.0000000000004  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  31 
 
 
236 aa  76.3  0.0000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  29.61 
 
 
222 aa  76.3  0.0000000000004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  29.52 
 
 
231 aa  76.3  0.0000000000004  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  30.7 
 
 
236 aa  75.5  0.0000000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  28.7 
 
 
234 aa  75.1  0.0000000000008  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  29.35 
 
 
232 aa  74.3  0.000000000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1838  transcriptional regulator, Crp/Fnr family  33.16 
 
 
225 aa  73.9  0.000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0983527  n/a   
 
 
-
 
NC_008784  BMASAVP1_1184  Crp/FNR family transcriptional regulator  27.98 
 
 
251 aa  73.2  0.000000000003  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0031  Crp/FNR family transcriptional regulator  27.98 
 
 
251 aa  73.2  0.000000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0037  Crp/FNR family transcriptional regulator  27.98 
 
 
251 aa  73.2  0.000000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  0.284481  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  23.45 
 
 
236 aa  73.6  0.000000000003  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_008835  BMA10229_1464  Crp/FNR family transcriptional regulator  27.98 
 
 
251 aa  73.2  0.000000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.855917  n/a   
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  25.11 
 
 
230 aa  73.6  0.000000000003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  30.26 
 
 
228 aa  73.2  0.000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  27.37 
 
 
229 aa  72.8  0.000000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0035  Crp/FNR family transcriptional regulator  27.98 
 
 
251 aa  72.8  0.000000000004  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0037  Crp/FNR family transcriptional regulator  27.98 
 
 
251 aa  73.2  0.000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0051  cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases  27.98 
 
 
251 aa  73.2  0.000000000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  28.32 
 
 
231 aa  72.4  0.000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_010086  Bmul_5297  Crp/FNR family transcriptional regulator  27.98 
 
 
248 aa  72.4  0.000000000005  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  23.01 
 
 
236 aa  72.8  0.000000000005  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_007511  Bcep18194_B3138  Crp/FNR family transcriptional regulator  27.4 
 
 
248 aa  72.4  0.000000000006  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2685  cAMP-binding protein  26.29 
 
 
272 aa  72.4  0.000000000006  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2589  Crp/FNR family transcriptional regulator  32.88 
 
 
235 aa  72.4  0.000000000006  Burkholderia ambifaria AMMD  Bacteria  normal  0.0679634  n/a   
 
 
-
 
NC_010508  Bcenmc03_2565  Crp/FNR family transcriptional regulator  31.8 
 
 
235 aa  72.4  0.000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0695171  normal  0.0307054 
 
 
-
 
NC_008740  Maqu_3081  CRP/FNR family transcriptional regulator  25.98 
 
 
249 aa  72  0.000000000007  Marinobacter aquaeolei VT8  Bacteria  normal  0.0390484  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  27.62 
 
 
229 aa  71.6  0.000000000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  27.64 
 
 
241 aa  71.2  0.00000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  30.34 
 
 
254 aa  71.2  0.00000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1540  Crp/FNR family transcriptional regulator  27.98 
 
 
630 aa  70.5  0.00000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.18142  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  27.75 
 
 
230 aa  70.9  0.00000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  30.73 
 
 
236 aa  70.5  0.00000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  26.32 
 
 
231 aa  70.5  0.00000000002  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  28.18 
 
 
232 aa  70.9  0.00000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  28.27 
 
 
219 aa  70.9  0.00000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  30.96 
 
 
231 aa  70.1  0.00000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4486  Crp/FNR family transcriptional regulator  26.94 
 
 
248 aa  70.1  0.00000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5008  Crp/FNR family transcriptional regulator  27.06 
 
 
249 aa  70.1  0.00000000003  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  28 
 
 
232 aa  69.7  0.00000000003  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  28.57 
 
 
229 aa  69.7  0.00000000004  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  30 
 
 
240 aa  69.7  0.00000000004  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  28.36 
 
 
232 aa  69.3  0.00000000005  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1929  Crp/FNR family transcriptional regulator  32.2 
 
 
235 aa  69.3  0.00000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.589711  n/a   
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  30.28 
 
 
239 aa  69.3  0.00000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_2541  Crp/FNR family transcriptional regulator  32.2 
 
 
235 aa  69.3  0.00000000005  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.000812643  n/a   
 
 
-
 
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