| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_4014 |
|---|
| Symbol | |
|---|
| ID | 7873660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 4412356 |
|---|
| End bp | 4413057 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643700951 |
|---|
| Product | transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_002890974 |
|---|
| Protein GI | 237654660 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGCA GGCCCCCCTC CCTCGCCCCC GACGCCAGCG ACCTGCTCGC CCGCTTCGCT
CCCTTCGACA TGCTCGACCC TTGCGCCCGC GAGCGCGTGC TCGCCGCCGC GCGGCCGATC
CACGCCGTCC GCGGCGAACT CCTCGTGCAG CAGGAGGACT GTCCGCGCGG TATCTACCTG
GTGCTCGACG GAAGAGTCAA ATGCTTCGTC CTCTCGCCCT CGGGCGGCGA GAAGATCGTC
CGCCTCGCCG AGCCCGGCAG CTTCTTCGGC GAGGAGGCCG CGCTGATCAA CCGCCCACAC
GTGGCCAACG CCCAGGCGAT CGGAACGAGC GAGCTGCTGC TGGTGCCGAC CGCCGCGCTG
CGCACCGCGA TGGTGAGCTC GACCGCCTTT TCGGTGTCGA TGAGCAACCG GCTCGCGGAA
GCCAGCTACG ATCTGATGTC GACCATGCAG GTTCAGTTCC AGCTCAGCGG CACGCAGCGC
GTCGCCCACT ACCTGACCCG GCTCGCGCCG GAAGATGCCG AGCGCTGCGA GATCCGCCTC
GACATCGACA AGCAGACCAT CGCCGCGCAG CTCAACCTGA CCCCGGAAAC GCTGTCGCGC
ATCCTCTCGC AGCTCACCCG CGACGGCATG ATCCAGCCGC GCGGCCGCCG CGGCATGGTG
CTCAGCAAGC TGTCGCAGCT GCGCGACTGC GCGGCGCACT AG
|
|---|
| Protein sequence | MSCRPPSLAP DASDLLARFA PFDMLDPCAR ERVLAAARPI HAVRGELLVQ QEDCPRGIYL
VLDGRVKCFV LSPSGGEKIV RLAEPGSFFG EEAALINRPH VANAQAIGTS ELLLVPTAAL
RTAMVSSTAF SVSMSNRLAE ASYDLMSTMQ VQFQLSGTQR VAHYLTRLAP EDAERCEIRL
DIDKQTIAAQ LNLTPETLSR ILSQLTRDGM IQPRGRRGMV LSKLSQLRDC AAH
|
|---|
| |