More than 300 homologs were found in PanDaTox collection
for query gene Tcr_0570 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_0570  methyl-accepting chemotaxis sensory transducer  100 
 
 
674 aa  1371    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  31.23 
 
 
674 aa  310  6.999999999999999e-83  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_013422  Hneap_0470  methyl-accepting chemotaxis sensory transducer  29.78 
 
 
668 aa  304  4.0000000000000003e-81  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  28.41 
 
 
671 aa  259  2e-67  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  31.02 
 
 
637 aa  232  2e-59  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  36.08 
 
 
634 aa  219  1e-55  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
634 aa  218  2.9999999999999998e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  36.24 
 
 
638 aa  217  7e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  35.56 
 
 
634 aa  214  4.9999999999999996e-54  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  34.57 
 
 
564 aa  213  7e-54  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  31.18 
 
 
712 aa  213  9e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  37.02 
 
 
559 aa  213  9e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  30.7 
 
 
712 aa  212  2e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  35.42 
 
 
558 aa  211  5e-53  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  34.5 
 
 
713 aa  210  8e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  29.82 
 
 
549 aa  209  1e-52  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  33.97 
 
 
548 aa  209  2e-52  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  35.23 
 
 
714 aa  206  2e-51  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  35.23 
 
 
714 aa  206  2e-51  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
541 aa  204  3e-51  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  32.8 
 
 
552 aa  204  6e-51  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  32.05 
 
 
552 aa  203  9e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  33.51 
 
 
716 aa  202  9.999999999999999e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  36.23 
 
 
637 aa  202  1.9999999999999998e-50  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009052  Sbal_0160  methyl-accepting chemotaxis sensory transducer  35.2 
 
 
653 aa  201  3e-50  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  33.99 
 
 
648 aa  201  3e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  36.31 
 
 
636 aa  201  3e-50  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  33.25 
 
 
773 aa  201  5e-50  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  34.72 
 
 
541 aa  200  6e-50  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
714 aa  200  7.999999999999999e-50  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  36.47 
 
 
715 aa  199  1.0000000000000001e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  36.69 
 
 
638 aa  199  1.0000000000000001e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  34.71 
 
 
499 aa  198  2.0000000000000003e-49  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  35.01 
 
 
638 aa  198  3e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  35.89 
 
 
688 aa  198  3e-49  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.14 
 
 
646 aa  198  3e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  36.42 
 
 
540 aa  198  3e-49  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  33.89 
 
 
638 aa  197  6e-49  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  36.69 
 
 
639 aa  197  6e-49  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  33.24 
 
 
539 aa  197  7e-49  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1951  methyl-accepting chemotaxis protein  37.39 
 
 
720 aa  196  1e-48  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  31.51 
 
 
702 aa  196  1e-48  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  34.16 
 
 
647 aa  195  2e-48  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  34.89 
 
 
714 aa  195  2e-48  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  35.28 
 
 
712 aa  196  2e-48  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  34.63 
 
 
738 aa  195  2e-48  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  35.05 
 
 
545 aa  195  2e-48  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  34.16 
 
 
647 aa  194  3e-48  Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  35.62 
 
 
688 aa  194  3e-48  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  34.89 
 
 
714 aa  195  3e-48  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  31.96 
 
 
646 aa  194  4e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_011663  Sbal223_0567  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
633 aa  194  4e-48  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1999  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
405 aa  194  4e-48  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3985  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
653 aa  194  4e-48  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0539  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
633 aa  194  4e-48  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0563  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
633 aa  194  4e-48  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3785  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
653 aa  194  6e-48  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3858  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
653 aa  194  6e-48  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  35.73 
 
 
714 aa  193  7e-48  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
688 aa  193  8e-48  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_010322  PputGB1_0629  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.17 
 
 
647 aa  193  9e-48  Pseudomonas putida GB-1  Bacteria  normal  0.624074  hitchhiker  0.000681907 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
540 aa  193  9e-48  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  33.24 
 
 
638 aa  193  1e-47  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
648 aa  192  2e-47  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  35.67 
 
 
568 aa  192  2e-47  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0942  putative methyl-accepting chemotaxis sensory transducer  35.03 
 
 
495 aa  192  2e-47  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000202207  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  35.65 
 
 
636 aa  192  2.9999999999999997e-47  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_012918  GM21_3345  methyl-accepting chemotaxis sensory transducer  33.58 
 
 
542 aa  191  2.9999999999999997e-47  Geobacter sp. M21  Bacteria  n/a    normal  0.0226154 
 
 
-
 
NC_010506  Swoo_4441  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
654 aa  191  2.9999999999999997e-47  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
640 aa  191  4e-47  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  36.25 
 
 
714 aa  191  4e-47  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
688 aa  191  5e-47  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  34.28 
 
 
554 aa  191  5e-47  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_008228  Patl_0143  methyl-accepting chemotaxis sensory transducer  35.83 
 
 
539 aa  191  5e-47  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
544 aa  191  5.999999999999999e-47  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  36.68 
 
 
438 aa  190  7e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  34.21 
 
 
545 aa  190  8e-47  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  31.52 
 
 
541 aa  190  8e-47  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  32.64 
 
 
545 aa  189  1e-46  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  34.08 
 
 
554 aa  189  1e-46  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  32.77 
 
 
638 aa  188  2e-46  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2331  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
538 aa  188  2e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.797541  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  33.24 
 
 
650 aa  188  3e-46  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  30.99 
 
 
628 aa  187  7e-46  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  35.69 
 
 
561 aa  187  7e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  34.36 
 
 
539 aa  186  1.0000000000000001e-45  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3213  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
495 aa  186  1.0000000000000001e-45  Shewanella baltica OS223  Bacteria  normal  0.023485  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  32.44 
 
 
554 aa  186  1.0000000000000001e-45  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  33.43 
 
 
578 aa  186  1.0000000000000001e-45  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  32.29 
 
 
558 aa  186  1.0000000000000001e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  35.1 
 
 
622 aa  186  1.0000000000000001e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  31.71 
 
 
554 aa  185  2.0000000000000003e-45  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
495 aa  186  2.0000000000000003e-45  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  31.47 
 
 
555 aa  185  2.0000000000000003e-45  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  33.57 
 
 
560 aa  185  3e-45  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  32.44 
 
 
554 aa  185  3e-45  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  35.69 
 
 
561 aa  184  3e-45  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_002947  PP_1940  methyl-accepting chemotaxis transducer  33.9 
 
 
716 aa  184  4.0000000000000006e-45  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.00000108039 
 
 
-
 
NC_009052  Sbal_1082  methyl-accepting chemotaxis sensory transducer  34.18 
 
 
495 aa  184  4.0000000000000006e-45  Shewanella baltica OS155  Bacteria  hitchhiker  0.000101058  n/a   
 
 
-
 
NC_009665  Shew185_1142  methyl-accepting chemotaxis sensory transducer  34.18 
 
 
495 aa  184  4.0000000000000006e-45  Shewanella baltica OS185  Bacteria  normal  0.0413666  n/a   
 
 
-
 
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