More than 300 homologs were found in PanDaTox collection
for query gene PputGB1_1660 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_1210  methyl-accepting chemotaxis sensory transducer  66.48 
 
 
540 aa  636    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.289047 
 
 
-
 
NC_002947  PP_2120  methyl-accepting chemotaxis sensory transducer  97.4 
 
 
555 aa  958    Pseudomonas putida KT2440  Bacteria  normal  normal  0.236845 
 
 
-
 
NC_004578  PSPTO_2526  methyl-accepting chemotaxis protein  66.41 
 
 
559 aa  645    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.591236  n/a   
 
 
-
 
NC_010501  PputW619_1637  methyl-accepting chemotaxis sensory transducer  92.75 
 
 
538 aa  924    Pseudomonas putida W619  Bacteria  normal  0.662156  normal 
 
 
-
 
NC_009512  Pput_3621  methyl-accepting chemotaxis sensory transducer  97.03 
 
 
555 aa  978    Pseudomonas putida F1  Bacteria  normal  normal  0.30858 
 
 
-
 
NC_007492  Pfl01_4317  chemotaxis sensory transducer  69.94 
 
 
540 aa  645    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.153995 
 
 
-
 
NC_010322  PputGB1_1660  methyl-accepting chemotaxis sensory transducer  100 
 
 
538 aa  1053    Pseudomonas putida GB-1  Bacteria  normal  normal  0.170942 
 
 
-
 
NC_008463  PA14_31400  putative chemotaxis transducer  63.94 
 
 
575 aa  605  9.999999999999999e-173  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.307711  hitchhiker  0.0000000000413464 
 
 
-
 
NC_009656  PSPA7_2672  putative chemotaxis transducer  64.87 
 
 
538 aa  604  1.0000000000000001e-171  Pseudomonas aeruginosa PA7  Bacteria  normal  0.119833  n/a   
 
 
-
 
NC_007912  Sde_1108  putative methyl-accepting chemotaxis sensory transducer  40.83 
 
 
539 aa  368  1e-100  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3464  methyl-accepting chemotaxis sensory transducer  41.43 
 
 
525 aa  340  2.9999999999999998e-92  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
572 aa  333  5e-90  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  46.13 
 
 
713 aa  249  8e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  45.16 
 
 
712 aa  244  1.9999999999999999e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
640 aa  244  3e-63  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.57 
 
 
523 aa  244  3.9999999999999997e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  45.16 
 
 
712 aa  243  9e-63  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
716 aa  240  5.999999999999999e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007510  Bcep18194_A4084  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
511 aa  239  1e-61  Burkholderia sp. 383  Bacteria  normal  0.51282  normal  0.262349 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  43.1 
 
 
650 aa  238  2e-61  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  46.43 
 
 
714 aa  236  7e-61  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  46.43 
 
 
714 aa  236  7e-61  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
552 aa  234  2.0000000000000002e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_007650  BTH_II2191  methyl-accepting chemotaxis protein  33.47 
 
 
666 aa  234  3e-60  Burkholderia thailandensis E264  Bacteria  normal  0.918882  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  32.66 
 
 
541 aa  233  8.000000000000001e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  43.64 
 
 
564 aa  233  9e-60  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5361  methyl-accepting chemotaxis sensory transducer  33.87 
 
 
508 aa  232  1e-59  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  41.35 
 
 
639 aa  232  2e-59  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  40.18 
 
 
640 aa  231  2e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
647 aa  230  6e-59  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_009075  BURPS668_A0379  methyl-accepting chemotaxis protein  31.94 
 
 
542 aa  229  1e-58  Burkholderia pseudomallei 668  Bacteria  normal  0.366227  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0285  methyl-accepting chemotaxis protein  31.94 
 
 
563 aa  229  1e-58  Burkholderia pseudomallei 1106a  Bacteria  normal  0.877776  n/a   
 
 
-
 
NC_009079  BMA10247_A2146  methyl-accepting chemotaxis protein  31.75 
 
 
542 aa  228  3e-58  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1169  methyl-accepting chemotaxis protein  31.75 
 
 
542 aa  228  3e-58  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  40.18 
 
 
629 aa  228  3e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  39.66 
 
 
633 aa  228  3e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_006349  BMAA1872  methyl-accepting chemotaxis protein  31.75 
 
 
542 aa  228  3e-58  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  40.35 
 
 
647 aa  227  4e-58  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
739 aa  227  5.0000000000000005e-58  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  31.75 
 
 
661 aa  226  6e-58  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
541 aa  226  9e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  41.04 
 
 
540 aa  226  9e-58  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
640 aa  225  1e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  40 
 
 
544 aa  226  1e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  39.08 
 
 
619 aa  225  1e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  31.75 
 
 
661 aa  226  1e-57  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
714 aa  225  2e-57  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
634 aa  224  3e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  40.68 
 
 
634 aa  222  9.999999999999999e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.4 
 
 
638 aa  222  9.999999999999999e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  41.49 
 
 
647 aa  222  9.999999999999999e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
640 aa  222  9.999999999999999e-57  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  38.12 
 
 
773 aa  221  1.9999999999999999e-56  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
634 aa  221  1.9999999999999999e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
714 aa  222  1.9999999999999999e-56  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  39.38 
 
 
641 aa  221  3e-56  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  39.71 
 
 
541 aa  221  3e-56  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  47.43 
 
 
688 aa  221  3e-56  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
541 aa  221  3e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  32.84 
 
 
541 aa  220  3.9999999999999997e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
543 aa  221  3.9999999999999997e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  36.66 
 
 
541 aa  220  5e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  39 
 
 
620 aa  220  5e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  42.27 
 
 
620 aa  220  5e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
638 aa  220  5e-56  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  48.1 
 
 
688 aa  219  7.999999999999999e-56  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  43.58 
 
 
624 aa  219  7.999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  33.15 
 
 
541 aa  219  7.999999999999999e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  42.51 
 
 
645 aa  219  7.999999999999999e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  38.27 
 
 
540 aa  219  7.999999999999999e-56  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  43.09 
 
 
647 aa  219  7.999999999999999e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  44.65 
 
 
714 aa  219  8.999999999999998e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  40.68 
 
 
638 aa  219  1e-55  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  40.65 
 
 
640 aa  218  2e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
674 aa  218  2e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
552 aa  217  4e-55  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
552 aa  217  4e-55  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  37.07 
 
 
541 aa  217  4e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
637 aa  217  5e-55  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_011138  MADE_02969  Methyl-accepting chemotaxis protein  29.61 
 
 
529 aa  216  8e-55  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0476708  n/a   
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  41.74 
 
 
546 aa  216  8e-55  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
656 aa  216  9.999999999999999e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  36.14 
 
 
621 aa  216  9.999999999999999e-55  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  39.7 
 
 
638 aa  214  1.9999999999999998e-54  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  39.7 
 
 
638 aa  215  1.9999999999999998e-54  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  40 
 
 
638 aa  215  1.9999999999999998e-54  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  40.74 
 
 
640 aa  215  1.9999999999999998e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  47.96 
 
 
688 aa  215  1.9999999999999998e-54  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  41.11 
 
 
634 aa  214  2.9999999999999995e-54  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  45.97 
 
 
636 aa  214  2.9999999999999995e-54  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
411 aa  214  2.9999999999999995e-54  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
620 aa  214  2.9999999999999995e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  32.06 
 
 
541 aa  214  3.9999999999999995e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  36.36 
 
 
620 aa  214  3.9999999999999995e-54  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
662 aa  214  4.9999999999999996e-54  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  41.89 
 
 
715 aa  213  4.9999999999999996e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  47.34 
 
 
688 aa  213  7e-54  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  41.87 
 
 
647 aa  213  7e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  41.64 
 
 
629 aa  213  7.999999999999999e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  36.53 
 
 
546 aa  213  9e-54  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
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