More than 300 homologs were found in PanDaTox collection
for query gene BBta_0868 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_0868  putative methyl-accepting chemotaxis receptor/sensory transducer  100 
 
 
571 aa  1124    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0528119 
 
 
-
 
NC_009485  BBta_0869  putative methyl-accepting chemotaxis receptor/sensory transducer  66.43 
 
 
662 aa  704    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0914748 
 
 
-
 
NC_011004  Rpal_5165  methyl-accepting chemotaxis sensory transducer  46.07 
 
 
559 aa  439  1e-121  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1739  chemotaxis sensory transducer  46.6 
 
 
559 aa  430  1e-119  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0889  methyl-accepting chemotaxis sensory transducer  46.32 
 
 
540 aa  422  1e-117  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  44.13 
 
 
577 aa  403  1e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  43.62 
 
 
568 aa  389  1e-107  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_011004  Rpal_0233  methyl-accepting chemotaxis sensory transducer  43.17 
 
 
563 aa  365  1e-99  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  34.1 
 
 
565 aa  243  7.999999999999999e-63  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_010338  Caul_1640  methyl-accepting chemotaxis sensory transducer  35.19 
 
 
600 aa  241  2.9999999999999997e-62  Caulobacter sp. K31  Bacteria  normal  0.0736059  normal  0.0470065 
 
 
-
 
NC_007643  Rru_A0755  chemotaxis sensory transducer  36.74 
 
 
567 aa  237  5.0000000000000005e-61  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  34.72 
 
 
565 aa  235  2.0000000000000002e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_011368  Rleg2_5523  methyl-accepting chemotaxis sensory transducer  31.16 
 
 
616 aa  227  4e-58  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00344787 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
562 aa  226  7e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  41.93 
 
 
566 aa  226  1e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  37.63 
 
 
676 aa  223  7e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_009485  BBta_6950  putative methyl-accepting chemotaxis receptor/sensory transducer  39.84 
 
 
661 aa  223  9.999999999999999e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
561 aa  221  1.9999999999999999e-56  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  42.6 
 
 
697 aa  221  3e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  40.32 
 
 
688 aa  221  3e-56  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  44.2 
 
 
561 aa  219  1e-55  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
674 aa  218  2e-55  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  40.66 
 
 
573 aa  218  2.9999999999999998e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  43.6 
 
 
688 aa  218  2.9999999999999998e-55  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  44.22 
 
 
562 aa  217  5e-55  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  35.47 
 
 
568 aa  216  8e-55  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_012848  Rleg_5244  methyl-accepting chemotaxis sensory transducer  31.81 
 
 
584 aa  215  1.9999999999999998e-54  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.553389 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  39.57 
 
 
670 aa  214  2.9999999999999995e-54  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  41.25 
 
 
567 aa  214  3.9999999999999995e-54  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  41.4 
 
 
561 aa  214  3.9999999999999995e-54  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  42.44 
 
 
562 aa  214  3.9999999999999995e-54  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  42.09 
 
 
689 aa  213  4.9999999999999996e-54  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
567 aa  212  1e-53  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  43.64 
 
 
562 aa  212  1e-53  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_010725  Mpop_2032  methyl-accepting chemotaxis sensory transducer  42.48 
 
 
558 aa  213  1e-53  Methylobacterium populi BJ001  Bacteria  normal  normal  0.176129 
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
556 aa  211  2e-53  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  42.51 
 
 
561 aa  212  2e-53  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  43.24 
 
 
542 aa  212  2e-53  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_010172  Mext_2555  chemotaxis sensory transducer  42.94 
 
 
561 aa  212  2e-53  Methylobacterium extorquens PA1  Bacteria  normal  0.834906  normal 
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  43.08 
 
 
563 aa  211  3e-53  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  39.51 
 
 
556 aa  211  4e-53  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  36.76 
 
 
566 aa  210  5e-53  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  40.23 
 
 
608 aa  210  5e-53  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  41.09 
 
 
572 aa  210  7e-53  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  42.2 
 
 
561 aa  210  7e-53  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  37.94 
 
 
656 aa  210  7e-53  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
563 aa  209  8e-53  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  40.67 
 
 
566 aa  209  1e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  39.4 
 
 
688 aa  209  2e-52  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007958  RPD_3836  Cache, type 2  39.89 
 
 
661 aa  209  2e-52  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.337162  normal 
 
 
-
 
NC_011757  Mchl_2778  methyl-accepting chemotaxis sensory transducer  43.25 
 
 
558 aa  208  2e-52  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.060825  normal 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  39.94 
 
 
563 aa  208  2e-52  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
560 aa  208  2e-52  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
694 aa  208  2e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  37.14 
 
 
656 aa  208  2e-52  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
561 aa  209  2e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
561 aa  208  3e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
567 aa  207  4e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
586 aa  207  4e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  40.58 
 
 
565 aa  207  5e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
566 aa  207  5e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_009485  BBta_7375  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
655 aa  207  5e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  39.44 
 
 
674 aa  207  5e-52  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  42.22 
 
 
681 aa  206  8e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0713  methyl-accepting chemotaxis sensory transducer  38.73 
 
 
685 aa  205  2e-51  Maricaulis maris MCS10  Bacteria  normal  normal  0.862704 
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  39.46 
 
 
561 aa  205  2e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  40 
 
 
565 aa  205  2e-51  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
565 aa  204  4e-51  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  37.53 
 
 
672 aa  204  5e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.38 
 
 
558 aa  204  5e-51  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
686 aa  203  8e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  37.98 
 
 
673 aa  202  9.999999999999999e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_010505  Mrad2831_0796  methyl-accepting chemotaxis sensory transducer  42.81 
 
 
558 aa  202  9.999999999999999e-51  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.579527 
 
 
-
 
NC_010505  Mrad2831_1828  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
579 aa  202  1.9999999999999998e-50  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0132835 
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  39.02 
 
 
561 aa  202  1.9999999999999998e-50  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  38.15 
 
 
655 aa  201  1.9999999999999998e-50  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007925  RPC_4105  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
561 aa  201  1.9999999999999998e-50  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.916882  normal 
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
559 aa  201  1.9999999999999998e-50  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  41 
 
 
688 aa  201  3e-50  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1716  methyl-accepting chemotaxis sensory transducer  41.3 
 
 
564 aa  201  3e-50  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0822312  normal  0.62395 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  39.33 
 
 
688 aa  201  3e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_010511  M446_2091  methyl-accepting chemotaxis sensory transducer  37.56 
 
 
562 aa  201  3.9999999999999996e-50  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0245477 
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  41.94 
 
 
558 aa  200  5e-50  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_010725  Mpop_0223  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
565 aa  200  5e-50  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  38.76 
 
 
561 aa  200  6e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  37.98 
 
 
562 aa  200  7e-50  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
558 aa  200  7e-50  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_010505  Mrad2831_1766  methyl-accepting chemotaxis sensory transducer  43.37 
 
 
575 aa  199  7.999999999999999e-50  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
567 aa  199  9e-50  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
675 aa  199  1.0000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007925  RPC_3475  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
649 aa  199  1.0000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0568  chemotaxis sensory transducer  41.35 
 
 
662 aa  198  2.0000000000000003e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  41.46 
 
 
559 aa  198  2.0000000000000003e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3476  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
641 aa  198  2.0000000000000003e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.640734  normal 
 
 
-
 
NC_011757  Mchl_5132  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
564 aa  197  3e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.315031  normal  0.0770622 
 
 
-
 
NC_009485  BBta_7506  putative methyl-accepting chemotaxis protein  41.12 
 
 
671 aa  198  3e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1709  methyl-accepting chemotaxis sensory transducer  37.2 
 
 
568 aa  197  4.0000000000000005e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.55655  normal  0.12205 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  40.73 
 
 
675 aa  197  5.000000000000001e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
544 aa  196  7e-49  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  42.81 
 
 
667 aa  196  7e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
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