| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5165 |
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| Symbol | |
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| ID | 6412865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5566901 |
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| End bp | 5568580 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642715055 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001994128 |
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| Protein GI | 192293523 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTTT CAATCACCCG GGCGGTTCTT CTGTTCGGCC TCATCATCGG CTCCGGCCTC
ACAGCGATCT TCGGCGCCAG CCTGTATGGC CTCTCTCAGC TCAAGGTCGG CGGACCGCTG
TATGAGCAGA TCAAGCTCGG CAACGATCTG GTGGCCGACA TCCTGCCGCC GCCCGCCTAT
GTGATCGAAG CCTATCTGGA GGCGACGCTG GCGCTGGAAG ACCCCGGCTC CTTGGCGCTT
CACCGCGAGC GGCTCGGTCG CCTCAAGAAG GAGTACCAGG AACGTCACGC CTTCTGGAGC
AAGGCGCCGC TCGAGCCGGC CATCAAGGCG CGTCTGATCG ATGATTCCGA CCGCGAGGTG
CAGAAATTCT GGCGCATCGT GGATGCAAGC CTGCTTCCGG CGATCGAGGC CAAGGACCCG
GACACCTCGA TGCAGGCCTA CAAGGATCTG ACCGCCGCCT ACACGGCGCA TCGTGCCATC
ATCGACGATA TCGTCAAGCG CACCAACGAT CTCAACGCCG CCACCGAAGC CGCAACCGCC
GTCCGGGTCA CGGACCTCAA TTATCTGCTG TGGGGCGTGT CCGGCACGGT GTTCCTGCTG
TTCGTGGCCG GGCTCACGGC GATCGTCAAA GGGGTGATCG TGCCGATCAC CGGGATGACC
GAGGTAATGC GGCGGCTGGC GAGCGGCGAT CGGGCCGTTG CTATTCCGGC GATCGAGCGC
GGCGACGAGG TCGGCGCGAT GGCGCGGGCC GTTCAGGTGT TCAAGGATAA CGCGCTGCGG
GTCGAAGCCA TGGAGTCCGA GCAGGGCATC AAGGCGCGAG CCGACGCCGA CCGACGCGCC
GAGATGCATA AGATGGCCGA CGATCTCGAC CGCGCCATCG GCCGCATCGT GCAGACCGTG
ACCTCCACCT CCACCGAAAT GGAGGCTGCC GCGCGACAGC TCGAGGGAGC GGCCGAGACG
ACGCAGCGGC TGGTGACCAC GGTGGCTGCG GCCTCGCAAC AATCCACCGC GACCGCGCAA
TCCGCCTCGG CCTCCTGCAA CGAGGTGGCC TCGTCGGCCT CGCAGATCGG TCAGCAGGTC
CGACAGTCGC AGAACATCTC GCAAGCCGCC GTCCGGCAGG CGCAGGAAAC CAACGCGCGG
ATCGCCGAGC TGTCGAAGGC CGCCGGACGC ATCGGCGATG TGGTGGATCT GATCAACGCG
GTCGCCTCGC AGACCAACCT GCTGGCGCTC AACGCCACCA TCGAGGCGGC GCGAGCCGGC
GAGGCAGGCA GGGGCTTTGC GGTCGTCGCC GCGGAGGTGA AGGCGCTGGC GGCGCAGACC
GCGCGCGCCA CCGACGAGAT CACCGAGCAG ATCTCCCAGA TGAAAGCCGC GACGGAATCC
TCGGTGTCGG CGATCGAAGC GATCGGCAAC ACCATCCTGC AGATCTCGGA GATTTCGGAT
TCGACCGCCT CGGCCGTCGA TCACCAGGGC GCCGCGATGC GGGAGATCGC CAGCACGGTG
CGGCAATCGG CGGATGCTGC GACCGAGGTC TCAGGGACGA TCGGCGCGGT CCGCGACGGC
GCCCAGAACA CCGGCGCGGC CTCCACCCAT GTGCACGATC TCGCCGCCGC GCTGCTGGCG
GAAAGCCGCC ATCTCAAGAC CAAGGTCGAT CGGTTCTCGG CCGCCGTGCG GGCCGCCTGA
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| Protein sequence | MRLSITRAVL LFGLIIGSGL TAIFGASLYG LSQLKVGGPL YEQIKLGNDL VADILPPPAY
VIEAYLEATL ALEDPGSLAL HRERLGRLKK EYQERHAFWS KAPLEPAIKA RLIDDSDREV
QKFWRIVDAS LLPAIEAKDP DTSMQAYKDL TAAYTAHRAI IDDIVKRTND LNAATEAATA
VRVTDLNYLL WGVSGTVFLL FVAGLTAIVK GVIVPITGMT EVMRRLASGD RAVAIPAIER
GDEVGAMARA VQVFKDNALR VEAMESEQGI KARADADRRA EMHKMADDLD RAIGRIVQTV
TSTSTEMEAA ARQLEGAAET TQRLVTTVAA ASQQSTATAQ SASASCNEVA SSASQIGQQV
RQSQNISQAA VRQAQETNAR IAELSKAAGR IGDVVDLINA VASQTNLLAL NATIEAARAG
EAGRGFAVVA AEVKALAAQT ARATDEITEQ ISQMKAATES SVSAIEAIGN TILQISEISD
STASAVDHQG AAMREIASTV RQSADAATEV SGTIGAVRDG AQNTGAASTH VHDLAAALLA
ESRHLKTKVD RFSAAVRAA
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