Gene BBta_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0869 
Symbol 
ID5154462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp900024 
End bp902012 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content66% 
IMG OID640555866 
Productputative methyl-accepting chemotaxis receptor/sensory transducer 
Protein accessionYP_001237036 
Protein GI148252451 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0914748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGC GCCTCTCCAT CTCCGCCGTC ATTGCAGCGT TCGGTCTCGT GCTCGCCATC 
GGCTTCGGGG CGGTCGTTCT GACCAGCGCC TATGCCTTGC GGGAGTTGAA GGTCGGCGGC
CCGCTCTATG ACAAGATCAA ACTCGGCAAT GATCTCGTTG CCGACATCCT GCCGCCGCCC
GAATATGTGC TCGAGGCCTA TCTCGAGGCG ACATTGGCGC TGCGCAATTC CAAGAACGTG
GAGGCGCATG CGAAGAGGTT GGCGCAGCTG AAGAAGGACT ATGAGGATCG CAAGACCTTT
TGGACCGGTT CGGCGCTGGA GCCCGAGCTG AAGTCGCTGC TGGTCGAGCG CTCCGACGGC
GAGGTCCGGA AGTTCTGGCA GACGGCGGAA GCCGAGCTGA TCCCGGCGCT GCGCGCCGGC
GACATGGCCA AAGCGGATGT GGCCTATGAT CGGCTGAGCG ATTCCTACAC AGCGCATCGC
GCCTTGATCG ATCGCCTGGT CGAGAAGGCG AACAAGCTCA ACTCGGACAT GGAGGCCGCC
GCGGCAGCGC AAGATCGCAG CATCTCCGCG GTGGTCTGGA GCGTCGCCGG CATCGTGCTG
ATCCTGGTCG TTGCCGGCAT ATCGGGGTTG GTGATCGGCG TGGTTCGTCC GCTCTCGCGG
ATGACCGGCC TGATGCGGCG GATTGCCCAG GGGGAACTAT CCGCCGAGAT TGCCTATTCC
GAACGCGGTG ACGAGATCGG CGCCATGGCC CGCGCGCTCG CGGTGTTCAA GACCAACGCG
CAGGAGAATG CGAGCCTGCG CGACCGTCAG GAGCGCGACC GCGAGGAGGC CGCCCGGTTG
AAGAAGAAGG CCATGCTCGA CATGGCCGAT GTGATCGAGC GCGAGACCAG CACGTCGGTC
GAGGCGGCGG CAGGCGCCTC GCGCCAGGTC GAGGCGGTGG CCAGCGGCCT GTCCGAACTT
GCGCATGAAT TGTCCGCCGA TGCCCAGTCC GTCGCCGCGG CGTCGGAACA GTCGCTGACC
AATGCACAGA CAGTGTCCTC GGCGGCCGAG CAGCTGAGCT CGGCGATCCG CGAGATCTCC
AGCCAGGTCG CGCGCGCCAG CGCCATCACC AAATCGGCGG TGACGGGGCG CGAGAAGGCC
AAGACCACCA TCGCCTCGCT GTCGCAGGCG GTGGTCAAGA TCGCCGAGGT CTCCAACCTG
ATCGGCGGCA TCGCCGAGCA GACCAACCTG CTGGCGCTCA ACGCCACCAT CGAAGCCGCG
CGCGCCGGCG ATGCCGGCCG CGGCTTCGCC GTGGTGGCGG CCGAGGTCAA GTCGCTGTCG
GATCAGACGG CCAAATCGAC CGAGGAGATC TCGCGCCTGA TCGGCGAGGT ACAGACCACG
ACGCAGGCGA CCGTGGATGT GGTCGAAGGC ATCGGCAGCC AGATTTCGGA GATCGACGAA
GTCGCCGCCT CGATTGCGGC CGCCATGGAG CAGCAACACG CGGCCACGCA GGAAATCAGC
CGGTCGGTCG GCTCTTCGGC TGACGCGGCG CGCGATGTCT CGGCCAAGAT CGGCAATGTC
GGCAAGGACG CCGGCATGGT CAATGATCGG GCCGTCGAGG TGCGCGGCGC GATCGGCGAG
GTGGCATCGA GTCTGACCGC GCTGCGGGCG ACGCTGGTGA AGCTGGTCAG GACGACGACC
AACGAAGCCG ACCGCCGCCG CTCGCCACGG CTGAGATCGA ACCTGCCGAT CAAGGTGGTC
GATGACCGCA AGGGCCCGCT GAAGGCCGAT CTGGTCGATA TTTCCGAGGG CGGCGCCTGG
TTCCGTCTCG AGCCTGAGCC GGGCATCGGC GATCGCGGCA CCCTGGAGTT CAGCGGCTTC
GCCGGCAGCG TGGCGTATTC TGTTCGCGCC AGGGACAACG ACGCCCTGCA TGTCGAGTTC
GACCCCGGCG CCAATCGCGA GGCTTTTCTC GACTGGTTCA GACGGTCGGT CACGCGACAG
GCGGCATGA
 
Protein sequence
MKMRLSISAV IAAFGLVLAI GFGAVVLTSA YALRELKVGG PLYDKIKLGN DLVADILPPP 
EYVLEAYLEA TLALRNSKNV EAHAKRLAQL KKDYEDRKTF WTGSALEPEL KSLLVERSDG
EVRKFWQTAE AELIPALRAG DMAKADVAYD RLSDSYTAHR ALIDRLVEKA NKLNSDMEAA
AAAQDRSISA VVWSVAGIVL ILVVAGISGL VIGVVRPLSR MTGLMRRIAQ GELSAEIAYS
ERGDEIGAMA RALAVFKTNA QENASLRDRQ ERDREEAARL KKKAMLDMAD VIERETSTSV
EAAAGASRQV EAVASGLSEL AHELSADAQS VAAASEQSLT NAQTVSSAAE QLSSAIREIS
SQVARASAIT KSAVTGREKA KTTIASLSQA VVKIAEVSNL IGGIAEQTNL LALNATIEAA
RAGDAGRGFA VVAAEVKSLS DQTAKSTEEI SRLIGEVQTT TQATVDVVEG IGSQISEIDE
VAASIAAAME QQHAATQEIS RSVGSSADAA RDVSAKIGNV GKDAGMVNDR AVEVRGAIGE
VASSLTALRA TLVKLVRTTT NEADRRRSPR LRSNLPIKVV DDRKGPLKAD LVDISEGGAW
FRLEPEPGIG DRGTLEFSGF AGSVAYSVRA RDNDALHVEF DPGANREAFL DWFRRSVTRQ
AA