Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0889 |
Symbol | |
ID | 3909069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1018199 |
End bp | 1019821 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637882782 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_484511 |
Protein GI | 86748015 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGA TTTTTGGGGC AAGCCTGTAT GGGCTGTCGC AACTCAAGGT CGGCGGACCG CTGTATGACC AGATCAAACT CGGCAACGAT CTGGTGGCCG ACATCCTGCC GCCGCCCGCT TACGTGATTG AAGCCTATCT GGAGGCGACG CTGGCGATCG AGGAGCCCGA TTCGTTCCCG CTCCGCCGCG AGCGGCTCGG CCGACTTAAG AAAGAATACC AGGACCGCCA CGCATTCTGG CTCACCGCGC CGCTCGATCC GGCGATCAAG GCACGCCTGA TCGACGATTC CGACCGCGAA GTGAAGAAGT TCTGGGACAT TCTGGAGGCC AGCCTGTTCC CGGCGATCGA GAGCAAGGAT CCCGACACGG CGATGCAGGC CTACAGGGAC CTGACCAAGG CCTACACGGC GCATCGCGCC ATCATCGACG ATATCGTCAA ACGGACCAAC GATCTGAATG CCGCAACCGA AGCGGCGACG GCGGTGCGCG CGGCCGATCT CAACTATCTG CTGTGGGGTG TATCGTCCGC GGTCTTCTTA TTGTTCATCG CGGGCCTGAC CGGGATCGTG AAAGGCGTGA TCGCGCCGAT CACCGGGATG ACGGAGGTGA TGCGCCGTCT CGCTGACGGA GACCGCTCGG TGGCGATTCC CGCGATCGAG CGCGGCGACG AGGTCGGCGC GATGGCGCGG GCGGTGCAGG TGTTCAAGGA CAACGCGCTG CGGGTCGAAG CGATGGAATC CGAAAAGGGG GTGAAGGCGC GCGCCGACGC GAACCGTCGG GCTGAAATGC AGAAGATTGC CGATGAGTTG GATGGCGCGA TCGGCAGGAT CGTCCAAACC GTGACGGCGA CGTCCACCGA AATGGAAGCG GCCGCAAGCC AACTGGCTGG CAACGTCGAT TCCACGCAGC GGCTGGCAAC TACCGTGGCG ACCGCTTCAC AACAGTCCAG CGCGACCGCA CAATCAACCG CCGTCACCTG CAACGAGGTC GCCTCGTCCG CATCCCAGAT CGGACAGCAA GTCCGGCAGG CGCAAAACAT CTCACAGGCC GCCGTCCGGC AGGCGCAGGA GACCAACGCG CGTATCGCCG ACCTTTCGAC CGCGGCCGGT CGTATCGGCG ATGTCGTCAA TCTGATCAAC GCGGTCGCGG CACAGACCAA TTTGCTGGCG CTCAATGCGA CGATCGAAGC CGCCCGCGCC GGCGAGGCGG GACGCGGCTT TGCCGTCGTC GCCTCGGAGG TCAAGGCGCT CGCATCCCAG ACCGCAAAAG CGACCGAGGA GATTACCGAA CAGATTTCCC AAATGAAGAC GGCGACCGAA TTGTCGGTGT CGGCGATCGA AGCGATCGGC ACCACCATTC TTCAGATCTC GGAAATCTCG GATGCGACCG CATCGGCGGT CGACCAGCAG GGCGCCGCGA TGCGCGAGAT TGCCGTCAGC GTCCGGGAGT CGGCGGACGC GGCGACCGAC GTCTCAAACA CGATCGGGAC GGTGCGCGAG GGCGCCGAGG ACACCGGCTC GGCGTCCGCG CATGTCCACG ATCTGGCCGC CTCGCTGCTC GCGGAAAGCC GCCACCTCAA GACCGAGGTC GACCGCTTCT CGGCAGCGGT GCGCGCCGCT TGA
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Protein sequence | MTAIFGASLY GLSQLKVGGP LYDQIKLGND LVADILPPPA YVIEAYLEAT LAIEEPDSFP LRRERLGRLK KEYQDRHAFW LTAPLDPAIK ARLIDDSDRE VKKFWDILEA SLFPAIESKD PDTAMQAYRD LTKAYTAHRA IIDDIVKRTN DLNAATEAAT AVRAADLNYL LWGVSSAVFL LFIAGLTGIV KGVIAPITGM TEVMRRLADG DRSVAIPAIE RGDEVGAMAR AVQVFKDNAL RVEAMESEKG VKARADANRR AEMQKIADEL DGAIGRIVQT VTATSTEMEA AASQLAGNVD STQRLATTVA TASQQSSATA QSTAVTCNEV ASSASQIGQQ VRQAQNISQA AVRQAQETNA RIADLSTAAG RIGDVVNLIN AVAAQTNLLA LNATIEAARA GEAGRGFAVV ASEVKALASQ TAKATEEITE QISQMKTATE LSVSAIEAIG TTILQISEIS DATASAVDQQ GAAMREIAVS VRESADAATD VSNTIGTVRE GAEDTGSASA HVHDLAASLL AESRHLKTEV DRFSAAVRAA
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