More than 300 homologs were found in PanDaTox collection
for query gene SO_3582 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  84.29 
 
 
541 aa  853    Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  60.63 
 
 
541 aa  634    Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  65.06 
 
 
541 aa  650    Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  100 
 
 
541 aa  1082    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  80.41 
 
 
541 aa  799    Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  63.96 
 
 
541 aa  651    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  80.41 
 
 
541 aa  799    Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  79.3 
 
 
541 aa  793    Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_009997  Sbal195_1117  methyl-accepting chemotaxis sensory transducer  80.04 
 
 
541 aa  796    Shewanella baltica OS195  Bacteria  normal  0.0100073  normal  0.0339889 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  64.88 
 
 
541 aa  671    Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  82.99 
 
 
541 aa  838    Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_009052  Sbal_1015  methyl-accepting chemotaxis sensory transducer  80.41 
 
 
541 aa  799    Shewanella baltica OS155  Bacteria  unclonable  0.0000000434326  n/a   
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  82.99 
 
 
541 aa  838    Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  66.17 
 
 
541 aa  663    Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  59.33 
 
 
542 aa  588  1e-167  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  35.23 
 
 
541 aa  298  2e-79  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
543 aa  281  3e-74  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  40.19 
 
 
637 aa  279  9e-74  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  39.21 
 
 
642 aa  272  9e-72  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  42.15 
 
 
541 aa  264  4e-69  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  34.59 
 
 
572 aa  262  1e-68  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
541 aa  261  2e-68  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  38.8 
 
 
642 aa  261  2e-68  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  36.71 
 
 
639 aa  260  4e-68  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  42.54 
 
 
640 aa  259  6e-68  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  41.93 
 
 
629 aa  259  1e-67  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  38.6 
 
 
541 aa  258  1e-67  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  44 
 
 
552 aa  255  1.0000000000000001e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
638 aa  255  2.0000000000000002e-66  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
638 aa  254  3e-66  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  41.94 
 
 
676 aa  253  5.000000000000001e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
636 aa  253  7e-66  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  42.49 
 
 
638 aa  252  1e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  38.35 
 
 
541 aa  251  3e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  41.46 
 
 
640 aa  251  3e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41.76 
 
 
681 aa  249  7e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  39.2 
 
 
541 aa  248  2e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  42.04 
 
 
638 aa  248  3e-64  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.9 
 
 
713 aa  247  4.9999999999999997e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  33.03 
 
 
541 aa  246  6.999999999999999e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
638 aa  246  9e-64  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  39.9 
 
 
712 aa  246  9.999999999999999e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
773 aa  245  1.9999999999999999e-63  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  32.98 
 
 
541 aa  244  1.9999999999999999e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
552 aa  244  3e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  38.67 
 
 
541 aa  243  5e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  36.81 
 
 
674 aa  243  5e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  42.31 
 
 
411 aa  243  6e-63  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  39.74 
 
 
425 aa  242  1e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  44.05 
 
 
637 aa  242  1e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  34.76 
 
 
640 aa  242  1e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  40.86 
 
 
638 aa  242  1e-62  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  36.55 
 
 
547 aa  241  2e-62  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  41.76 
 
 
712 aa  241  2e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
620 aa  241  2.9999999999999997e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  41.54 
 
 
716 aa  240  4e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  42.66 
 
 
653 aa  240  4e-62  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
639 aa  240  5.999999999999999e-62  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
639 aa  239  5.999999999999999e-62  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_010002  Daci_3750  methyl-accepting chemotaxis sensory transducer  32.68 
 
 
533 aa  239  9e-62  Delftia acidovorans SPH-1  Bacteria  normal  0.13147  normal  0.360613 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  39.05 
 
 
640 aa  239  1e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
620 aa  239  1e-61  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
544 aa  238  2e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
547 aa  238  2e-61  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
522 aa  238  2e-61  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
560 aa  238  2e-61  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  38.78 
 
 
564 aa  238  2e-61  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  43.24 
 
 
639 aa  237  3e-61  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
650 aa  238  3e-61  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  43.24 
 
 
639 aa  237  3e-61  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  40.97 
 
 
539 aa  237  4e-61  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  38.4 
 
 
541 aa  237  4e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  37.44 
 
 
621 aa  237  5.0000000000000005e-61  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  39.95 
 
 
573 aa  236  9e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  39.69 
 
 
620 aa  236  9e-61  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
647 aa  235  2.0000000000000002e-60  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  39.22 
 
 
541 aa  235  2.0000000000000002e-60  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.34 
 
 
523 aa  235  2.0000000000000002e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  41.11 
 
 
541 aa  235  2.0000000000000002e-60  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  43.41 
 
 
624 aa  234  3e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  39.71 
 
 
548 aa  234  3e-60  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  39.94 
 
 
647 aa  234  4.0000000000000004e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
541 aa  233  5e-60  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_004578  PSPTO_5159  methyl-accepting chemotaxis protein  41.69 
 
 
638 aa  233  5e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
620 aa  233  6e-60  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
634 aa  233  6e-60  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
541 aa  233  7.000000000000001e-60  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  35.33 
 
 
546 aa  233  8.000000000000001e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_004578  PSPTO_5569  methyl-accepting chemotaxis protein  39.28 
 
 
541 aa  231  2e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  45.19 
 
 
573 aa  231  2e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  44.15 
 
 
647 aa  230  5e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  36.24 
 
 
541 aa  230  5e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  37.97 
 
 
596 aa  230  5e-59  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.77 
 
 
524 aa  229  1e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
658 aa  228  2e-58  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  34.14 
 
 
546 aa  228  2e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  33.8 
 
 
547 aa  228  2e-58  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_009654  Mmwyl1_2432  methyl-accepting chemotaxis sensory transducer  36.18 
 
 
555 aa  228  2e-58  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0013651  normal  0.119091 
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  37.3 
 
 
492 aa  228  3e-58  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  34.76 
 
 
633 aa  227  3e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
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