More than 300 homologs were found in PanDaTox collection
for query gene RS02135 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003296  RS02135  putative transcription regulator protein  100 
 
 		 252 aa  522  1e-147  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc1895  putative transcription regulator protein  57.54 
 
 		 252 aa  299  3e-80  Ralstonia solanacearum GMI1000  Bacteria  normal  0.030885  normal  1 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  48.84 
 
 		 215 aa  73.2  0.000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_32780  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.73 
 
 		 216 aa  72.8  0.000000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  45.35 
 
 		 227 aa  68.2  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal  1 
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  54.41 
 
 		 217 aa  68.2  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  44.19 
 
 		 228 aa  66.2  0.0000000004  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  42.86 
 
 		 229 aa  65.5  0.0000000008  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  43.53 
 
 		 221 aa  65.1  0.000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  58.93 
 
 		 245 aa  62.8  0.000000005  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0252513 
 
 
-
 
NC_009380  Strop_1952  regulatory protein, LuxR  45.56 
 
 		 96 aa  62.8  0.000000005  Salinispora tropica CNB-440  Bacteria  normal  0.801604  normal  0.129884 
 
 
-
 
NC_012669  Bcav_0296  two component transcriptional regulator, LuxR family  42.86 
 
 		 198 aa  62.4  0.000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.1736  normal  1 
 
 
-
 
NC_013174  Jden_1602  two component transcriptional regulator, LuxR family  46.97 
 
 		 226 aa  61.6  0.00000001  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  44.94 
 
 		 222 aa  60.8  0.00000002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  49.25 
 
 		 232 aa  60.1  0.00000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_0268  two component LuxR family transcriptional regulator  47.62 
 
 		 217 aa  59.7  0.00000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.289536  normal  1 
 
 
-
 
NC_013169  Ksed_06250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.05 
 
 		 228 aa  59.7  0.00000005  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  39.76 
 
 		 217 aa  58.9  0.00000007  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  33.08 
 
 		 241 aa  58.2  0.0000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  41.11 
 
 		 226 aa  57.4  0.0000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1104  two component LuxR family transcriptional regulator  33.33 
 
 		 218 aa  57.8  0.0000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.348687  n/a   
 
 
-
 
NC_010501  PputW619_4590  two component LuxR family transcriptional regulator  35.16 
 
 		 258 aa  57.4  0.0000002  Pseudomonas putida W619  Bacteria  normal  1  normal  0.038066 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  44.44 
 
 		 216 aa  57  0.0000003  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_007517  Gmet_1513  LuxR family transcriptional regulator  29.44 
 
 		 246 aa  57  0.0000003  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000493267  normal  1 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  38.55 
 
 		 216 aa  56.6  0.0000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  36.36 
 
 		 219 aa  56.2  0.0000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  48.33 
 
 		 214 aa  56.6  0.0000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  46.55 
 
 		 211 aa  56.6  0.0000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  46.03 
 
 		 230 aa  56.6  0.0000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_009921  Franean1_5616  LuxR family transcriptional regulator  45.45 
 
 		 347 aa  56.2  0.0000005  Frankia sp. EAN1pec  Bacteria  normal  0.0605675  normal  0.548217 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  38.55 
 
 		 226 aa  56.2  0.0000005  Conexibacter woesei DSM 14684  Bacteria  normal  1  hitchhiker  0.00432991 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  45.07 
 
 		 218 aa  56.2  0.0000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_007614  Nmul_A2579  LuxR family transcriptional regulator  24.06 
 
 		 257 aa  55.8  0.0000006  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.286869  n/a   
 
 
-
 
NC_008340  Mlg_2151  two component LuxR family transcriptional regulator  46.77 
 
 		 264 aa  55.8  0.0000006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.104213 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  35.14 
 
 		 233 aa  55.8  0.0000006  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013093  Amir_1910  two component transcriptional regulator, LuxR family  44.62 
 
 		 218 aa  55.8  0.0000006  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  44.44 
 
 		 220 aa  55.8  0.0000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal  1 
 
 
-
 
NC_013889  TK90_1314  transcriptional regulator, LuxR family  33.71 
 
 		 204 aa  55.5  0.0000008  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.404844  normal  1 
 
 
-
 
NC_010506  Swoo_0644  LuxR family transcriptional regulator  37.8 
 
 		 221 aa  54.7  0.000001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0140532  unclonable  0.00000001613 
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  52.73 
 
 		 250 aa  55.1  0.000001  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  43.08 
 
 		 211 aa  54.7  0.000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_013947  Snas_3324  two component transcriptional regulator, LuxR family  43.08 
 
 		 219 aa  54.7  0.000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0107044  normal  0.345616 
 
 
-
 
NC_007777  Francci3_0925  LuxR family transcriptional regulator  45.28 
 
 		 297 aa  53.9  0.000002  Frankia sp. CcI3  Bacteria  normal  0.177236  normal  1 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  41.94 
 
 		 224 aa  54.3  0.000002  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.86 
 
 		 214 aa  54.3  0.000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  39.08 
 
 		 233 aa  53.9  0.000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013440  Hoch_6272  transcriptional regulator, LuxR family  31.94 
 
 		 394 aa  54.3  0.000002  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.486348 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  47.62 
 
 		 225 aa  54.3  0.000002  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1059  two component transcriptional regulator, LuxR family  38.36 
 
 		 221 aa  53.9  0.000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  42.62 
 
 		 233 aa  53.9  0.000002  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_0633  LuxR family transcriptional regulator  42.5 
 
 		 224 aa  54.3  0.000002  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_1981  two component transcriptional regulator, LuxR family  38.54 
 
 		 222 aa  53.9  0.000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4551  two component transcriptional regulator, LuxR family  51.85 
 
 		 220 aa  53.9  0.000002  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  38.46 
 
 		 225 aa  54.3  0.000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  45.16 
 
 		 219 aa  53.5  0.000003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  45.61 
 
 		 244 aa  53.5  0.000003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  44.26 
 
 		 226 aa  53.5  0.000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  49.12 
 
 		 216 aa  53.5  0.000003  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  45.61 
 
 		 216 aa  53.1  0.000004  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_012850  Rleg_1495  two component transcriptional regulator, LuxR family  30.7 
 
 		 207 aa  53.1  0.000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.194449  normal  0.395611 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  33.61 
 
 		 220 aa  53.1  0.000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  34.15 
 
 		 239 aa  53.1  0.000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  31.97 
 
 		 226 aa  53.1  0.000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.47 
 
 		 239 aa  52.8  0.000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.711047 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  35.11 
 
 		 220 aa  52.8  0.000005  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  33.33 
 
 		 215 aa  52.8  0.000005  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  43.1 
 
 		 215 aa  52.8  0.000005  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  39.29 
 
 		 218 aa  52.8  0.000005  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.07 
 
 		 219 aa  53.1  0.000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.263807 
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  41.67 
 
 		 210 aa  52.4  0.000006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007958  RPD_1558  response regulator receiver  43.33 
 
 		 221 aa  52.4  0.000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_3887  LuxR family transcriptional regulator  46.67 
 
 		 221 aa  52.4  0.000006  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.00000207134 
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  41.67 
 
 		 210 aa  52.4  0.000006  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.147525 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  45.61 
 
 		 228 aa  52.8  0.000006  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.67 
 
 		 230 aa  52.4  0.000006  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  39.56 
 
 		 229 aa  52  0.000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.306134 
 
 
-
 
NC_010816  BLD_0642  putative response regulator  44.44 
 
 		 217 aa  52  0.000008  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  33.9 
 
 		 219 aa  52  0.000008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  32.03 
 
 		 215 aa  52  0.000008  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  39.47 
 
 		 231 aa  52.4  0.000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  32.03 
 
 		 215 aa  52  0.000009  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  32.03 
 
 		 215 aa  52  0.000009  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  43.55 
 
 		 209 aa  52  0.000009  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  43.1 
 
 		 224 aa  52  0.000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009483  Gura_3112  regulatory protein, LuxR  25.74 
 
 		 250 aa  52  0.000009  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  48.15 
 
 		 220 aa  52  0.000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  41.1 
 
 		 213 aa  51.2  0.00001  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.33 
 
 		 229 aa  52  0.00001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_007404  Tbd_2786  two component LuxR family transcriptional regulator  45 
 
 		 210 aa  51.6  0.00001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0443035  normal  0.922606 
 
 
-
 
NC_013170  Ccur_10690  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36 
 
 		 215 aa  51.6  0.00001  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  37.5 
 
 		 230 aa  51.2  0.00001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  39.06 
 
 		 231 aa  51.6  0.00001  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_007947  Mfla_2409  LuxR family transcriptional regulator  24.9 
 
 		 272 aa  51.6  0.00001  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_1617  two component transcriptional regulator, LuxR family  44.44 
 
 		 214 aa  51.6  0.00001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.321528  n/a   
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  38.46 
 
 		 231 aa  51.6  0.00001  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.16 
 
 		 247 aa  52  0.00001  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  37.7 
 
 		 218 aa  51.6  0.00001  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  43.94 
 
 		 223 aa  51.6  0.00001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  35.8 
 
 		 220 aa  52  0.00001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal  1 
 
 
-
 
NC_011729  PCC7424_5070  two component transcriptional regulator, LuxR family  37.84 
 
 		 210 aa  51.2  0.00001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.744929 
 
 
-
 
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