| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4590 |
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| Symbol | |
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| ID | 6113571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5065688 |
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| End bp | 5066464 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641624396 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001751439 |
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| Protein GI | 170723751 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.038066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAAGT CATTCAGTGA GGTGAAGGTT CTGGTGGTTG ATGACCAGCC CCTGATCGTC
GAACAGTTGT GTGAGTATCT CGAAAATCAA GGCCATCATT GCGTGGCCGC GCATTCAACA
GACGAGGCCA TCGAGCGCTA TGTGGCGGAT GAAGCCATTG GCCTGGTGCT GTGTGACCTG
CACATGCCCG AGCGCGATGG CATTGAACTG GTGAGGGCGC TAAAAGAAAT TGCCGGGCGC
CAGCGCATGT TCGAAGCGAT CATGCTCACT GGCCGGGCCG ACAAGCAGGA CGTGATTCGT
GCGCTGCGCG AAGGCTTTGC TGATTACTAC CAAAAACCCG TCGACCTCGA CGAACTGCTC
GAAGGCGTGC GTCGCCTGGA GCAAGTTTTG CTGGAACGCA AATCCAACTT CCAGAACCTG
GGCAATCTAA ACAAACGGTT ACAAGACCTG GCGGGCTGCA TCGATGAGCT TTACCAGGAC
CTGGAGAAAG CTCGGGGCCA GGGAGTCCAC CGCCGCGCCA GCGATGTCGA AGAGGGTGAG
AGCGACTTGC CTGCCGCGTT CGAGAAGCTC TCACCACGCC AGCTGGAAGT GGCCCGGCTG
GTGAGCAAAG GCAAGACCAA CTACCAGATT GCCTGCGAGC TCGGGATCAC CGAAAACACC
GTGAAACTGT ATGTTTCGCA GGTGTTGCGA CTGACCCATA TGCACAACCG CACGCAACTG
GCGCTGGCGT TGACACCCAG TTCGTCGCCG GTGCACCAGC GGTTCACCAC CCATTGA
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| Protein sequence | MNKSFSEVKV LVVDDQPLIV EQLCEYLENQ GHHCVAAHST DEAIERYVAD EAIGLVLCDL
HMPERDGIEL VRALKEIAGR QRMFEAIMLT GRADKQDVIR ALREGFADYY QKPVDLDELL
EGVRRLEQVL LERKSNFQNL GNLNKRLQDL AGCIDELYQD LEKARGQGVH RRASDVEEGE
SDLPAAFEKL SPRQLEVARL VSKGKTNYQI ACELGITENT VKLYVSQVLR LTHMHNRTQL
ALALTPSSSP VHQRFTTH
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